EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000024364 (Gene tree)
Gene ID: 105031084
Gene Symbol: tdrd1
Alias: im:7155161
Full Name: tudor domain containing 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 147294 bases
Position: chrLG05:30824253-30971546
Accession: 105031084
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000025723	TUDOR	PF00567.24	6.6e-111	1	4
ENSELUP00000025723	TUDOR	PF00567.24	6.6e-111	2	4
ENSELUP00000025723	TUDOR	PF00567.24	6.6e-111	3	4
ENSELUP00000025723	TUDOR	PF00567.24	6.6e-111	4	4
ENSELUP00000025727	TUDOR	PF00567.24	6.6e-111	1	4
ENSELUP00000025727	TUDOR	PF00567.24	6.6e-111	2	4
ENSELUP00000025727	TUDOR	PF00567.24	6.6e-111	3	4
ENSELUP00000025727	TUDOR	PF00567.24	6.6e-111	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000043693	-	4412	XM_013131974	ENSELUP00000025727	1200 (aa)	XP_012987428	UPI000661AEBE
ENSELUT00000037476	-	4495	XM_013131970	ENSELUP00000025723	1200 (aa)	XP_012987424	UPI000661AEBE

Gene Model

Click here to download ENSELUG00000024364's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000024364's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000024364	tdrd1	75	32.381	ENSELUG00000018873	-	86	32.381

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000024364	tdrd1	88	33.366	ENSG00000095627	TDRD1	86	33.366	Homo_sapiens
ENSELUG00000024364	tdrd1	99	47.020	ENSAPOG00000023199	tdrd1	99	47.103	Acanthochromis_polyacanthus
ENSELUG00000024364	tdrd1	87	34.927	ENSAMEG00000015182	TDRD1	84	34.927	Ailuropoda_melanoleuca
ENSELUG00000024364	tdrd1	99	47.206	ENSACIG00000010576	tdrd1	97	47.206	Amphilophus_citrinellus
ENSELUG00000024364	tdrd1	99	55.877	ENSAOCG00000007059	tdrd1	99	55.724	Amphiprion_ocellaris
ENSELUG00000024364	tdrd1	99	47.465	ENSAPEG00000017049	tdrd1	98	47.465	Amphiprion_percula
ENSELUG00000024364	tdrd1	98	48.820	ENSATEG00000021627	tdrd1	99	48.820	Anabas_testudineus
ENSELUG00000024364	tdrd1	88	32.717	ENSAPLG00000012609	TDRD1	97	32.717	Anas_platyrhynchos
ENSELUG00000024364	tdrd1	84	42.424	ENSACAG00000009854	TDRD1	78	42.424	Anolis_carolinensis
ENSELUG00000024364	tdrd1	88	33.706	ENSANAG00000035710	TDRD1	86	34.146	Aotus_nancymaae
ENSELUG00000024364	tdrd1	99	46.645	ENSACLG00000014107	tdrd1	99	46.645	Astatotilapia_calliptera
ENSELUG00000024364	tdrd1	99	53.262	ENSAMXG00000015146	tdrd1	99	53.262	Astyanax_mexicanus
ENSELUG00000024364	tdrd1	87	33.487	ENSBTAG00000006855	TDRD1	86	33.815	Bos_taurus
ENSELUG00000024364	tdrd1	84	33.953	ENSCJAG00000019270	TDRD1	82	34.532	Callithrix_jacchus
ENSELUG00000024364	tdrd1	88	33.579	ENSCAFG00000011266	TDRD1	88	33.579	Canis_familiaris
ENSELUG00000024364	tdrd1	85	34.036	ENSCAFG00020012373	TDRD1	84	34.580	Canis_lupus_dingo
ENSELUG00000024364	tdrd1	87	34.381	ENSCHIG00000012766	TDRD1	87	34.381	Capra_hircus
ENSELUG00000024364	tdrd1	88	32.715	ENSTSYG00000004935	TDRD1	90	32.715	Carlito_syrichta
ENSELUG00000024364	tdrd1	88	31.814	ENSCPOG00000004190	TDRD1	90	31.814	Cavia_porcellus
ENSELUG00000024364	tdrd1	89	34.211	ENSCCAG00000027375	TDRD1	87	34.211	Cebus_capucinus
ENSELUG00000024364	tdrd1	89	34.047	ENSCATG00000035999	TDRD1	88	33.612	Cercocebus_atys
ENSELUG00000024364	tdrd1	88	33.550	ENSCLAG00000003935	TDRD1	89	33.550	Chinchilla_lanigera
ENSELUG00000024364	tdrd1	89	33.426	ENSCSAG00000005071	TDRD1	86	33.426	Chlorocebus_sabaeus
ENSELUG00000024364	tdrd1	88	41.844	ENSCHOG00000001690	TDRD1	79	41.844	Choloepus_hoffmanni
ENSELUG00000024364	tdrd1	91	33.605	ENSCPBG00000003780	TDRD1	88	33.605	Chrysemys_picta_bellii
ENSELUG00000024364	tdrd1	93	33.885	ENSCANG00000035172	TDRD1	86	33.885	Colobus_angolensis_palliatus
ENSELUG00000024364	tdrd1	89	32.606	ENSCGRG00001004632	Tdrd1	90	32.606	Cricetulus_griseus_chok1gshd
ENSELUG00000024364	tdrd1	88	32.805	ENSCGRG00000004981	Tdrd1	85	32.805	Cricetulus_griseus_crigri
ENSELUG00000024364	tdrd1	92	42.440	ENSCSEG00000006983	tdrd1	98	42.529	Cynoglossus_semilaevis
ENSELUG00000024364	tdrd1	87	44.762	ENSCVAG00000020980	tdrd1	97	44.762	Cyprinodon_variegatus
ENSELUG00000024364	tdrd1	99	50.454	ENSDARG00000007465	tdrd1	99	50.454	Danio_rerio
ENSELUG00000024364	tdrd1	87	33.056	ENSDNOG00000012114	TDRD1	86	33.056	Dasypus_novemcinctus
ENSELUG00000024364	tdrd1	93	32.961	ENSDORG00000009986	Tdrd1	87	32.961	Dipodomys_ordii
ENSELUG00000024364	tdrd1	87	31.161	ENSETEG00000020143	TDRD1	83	31.161	Echinops_telfairi
ENSELUG00000024364	tdrd1	87	32.079	ENSEASG00005014802	TDRD1	84	33.096	Equus_asinus_asinus
ENSELUG00000024364	tdrd1	87	34.923	ENSECAG00000009748	TDRD1	81	34.766	Equus_caballus
ENSELUG00000024364	tdrd1	88	31.680	ENSEEUG00000010076	TDRD1	89	30.482	Erinaceus_europaeus
ENSELUG00000024364	tdrd1	83	47.287	ENSFCAG00000000632	TDRD1	83	47.287	Felis_catus
ENSELUG00000024364	tdrd1	77	34.081	ENSFALG00000002237	TDRD1	93	34.081	Ficedula_albicollis
ENSELUG00000024364	tdrd1	91	33.493	ENSFDAG00000013225	TDRD1	87	33.493	Fukomys_damarensis
ENSELUG00000024364	tdrd1	91	38.815	ENSFHEG00000009203	tdrd1	94	37.931	Fundulus_heteroclitus
ENSELUG00000024364	tdrd1	69	56.204	ENSGMOG00000016797	-	69	56.204	Gadus_morhua
ENSELUG00000024364	tdrd1	76	37.097	ENSGALG00000046180	TDRD1	90	37.097	Gallus_gallus
ENSELUG00000024364	tdrd1	98	43.410	ENSGAFG00000002668	tdrd1	99	43.457	Gambusia_affinis
ENSELUG00000024364	tdrd1	77	58.394	ENSGACG00000006590	tdrd1	100	58.394	Gasterosteus_aculeatus
ENSELUG00000024364	tdrd1	89	33.398	ENSGGOG00000004250	TDRD1	86	33.398	Gorilla_gorilla
ENSELUG00000024364	tdrd1	99	46.316	ENSHBUG00000005216	tdrd1	99	46.316	Haplochromis_burtoni
ENSELUG00000024364	tdrd1	88	31.703	ENSHGLG00000010877	TDRD1	87	31.703	Heterocephalus_glaber_female
ENSELUG00000024364	tdrd1	86	34.066	ENSHGLG00100013857	TDRD1	87	34.066	Heterocephalus_glaber_male
ENSELUG00000024364	tdrd1	91	40.588	ENSHCOG00000002840	tdrd1	90	40.588	Hippocampus_comes
ENSELUG00000024364	tdrd1	99	52.946	ENSIPUG00000017232	tdrd1	99	52.946	Ictalurus_punctatus
ENSELUG00000024364	tdrd1	87	33.528	ENSSTOG00000003221	TDRD1	87	33.528	Ictidomys_tridecemlineatus
ENSELUG00000024364	tdrd1	89	33.705	ENSJJAG00000014720	Tdrd1	88	33.705	Jaculus_jaculus
ENSELUG00000024364	tdrd1	90	48.626	ENSKMAG00000018558	tdrd1	98	48.626	Kryptolebias_marmoratus
ENSELUG00000024364	tdrd1	95	50.476	ENSLBEG00000004161	tdrd1	98	49.144	Labrus_bergylta
ENSELUG00000024364	tdrd1	86	35.890	ENSLACG00000011559	TDRD1	85	35.890	Latimeria_chalumnae
ENSELUG00000024364	tdrd1	98	40.633	ENSLOCG00000012030	tdrd1	100	45.011	Lepisosteus_oculatus
ENSELUG00000024364	tdrd1	77	34.345	ENSLAFG00000011575	TDRD1	94	34.345	Loxodonta_africana
ENSELUG00000024364	tdrd1	89	34.208	ENSMFAG00000043487	TDRD1	86	34.208	Macaca_fascicularis
ENSELUG00000024364	tdrd1	89	34.208	ENSMMUG00000022517	TDRD1	86	34.208	Macaca_mulatta
ENSELUG00000024364	tdrd1	89	34.014	ENSMNEG00000031108	TDRD1	86	34.014	Macaca_nemestrina
ENSELUG00000024364	tdrd1	89	34.111	ENSMLEG00000032281	TDRD1	86	34.111	Mandrillus_leucophaeus
ENSELUG00000024364	tdrd1	91	51.137	ENSMAMG00000015287	tdrd1	96	50.445	Mastacembelus_armatus
ENSELUG00000024364	tdrd1	99	46.334	ENSMZEG00005025315	tdrd1	99	46.334	Maylandia_zebra
ENSELUG00000024364	tdrd1	85	31.619	ENSMGAG00000011067	TDRD1	99	31.691	Meleagris_gallopavo
ENSELUG00000024364	tdrd1	76	35.301	ENSMAUG00000012164	Tdrd1	78	35.301	Mesocricetus_auratus
ENSELUG00000024364	tdrd1	98	31.662	ENSMICG00000016190	TDRD1	88	33.784	Microcebus_murinus
ENSELUG00000024364	tdrd1	85	33.206	ENSMOCG00000022360	Tdrd1	84	33.493	Microtus_ochrogaster
ENSELUG00000024364	tdrd1	99	46.683	ENSMMOG00000014068	tdrd1	100	47.015	Mola_mola
ENSELUG00000024364	tdrd1	83	32.745	ENSMODG00000009788	TDRD1	84	32.745	Monodelphis_domestica
ENSELUG00000024364	tdrd1	98	47.822	ENSMALG00000022115	tdrd1	98	48.599	Monopterus_albus
ENSELUG00000024364	tdrd1	89	34.758	MGP_CAROLIEiJ_G0023095	Tdrd1	86	34.758	Mus_caroli
ENSELUG00000024364	tdrd1	89	34.360	ENSMUSG00000025081	Tdrd1	88	34.612	Mus_musculus
ENSELUG00000024364	tdrd1	89	33.799	MGP_PahariEiJ_G0014583	Tdrd1	88	34.713	Mus_pahari
ENSELUG00000024364	tdrd1	89	34.641	MGP_SPRETEiJ_G0024016	Tdrd1	88	34.892	Mus_spretus
ENSELUG00000024364	tdrd1	75	34.858	ENSMPUG00000001987	TDRD1	75	34.858	Mustela_putorius_furo
ENSELUG00000024364	tdrd1	88	32.900	ENSNGAG00000015231	Tdrd1	88	32.900	Nannospalax_galili
ENSELUG00000024364	tdrd1	99	46.173	ENSNBRG00000017920	tdrd1	99	46.173	Neolamprologus_brichardi
ENSELUG00000024364	tdrd1	86	47.287	ENSNLEG00000016228	TDRD1	83	47.287	Nomascus_leucogenys
ENSELUG00000024364	tdrd1	85	31.316	ENSMEUG00000007717	TDRD1	82	31.316	Notamacropus_eugenii
ENSELUG00000024364	tdrd1	85	33.973	ENSOPRG00000009180	TDRD1	84	33.973	Ochotona_princeps
ENSELUG00000024364	tdrd1	89	33.180	ENSODEG00000011965	TDRD1	87	33.180	Octodon_degus
ENSELUG00000024364	tdrd1	99	47.674	ENSONIG00000016382	tdrd1	99	47.674	Oreochromis_niloticus
ENSELUG00000024364	tdrd1	87	32.903	ENSOANG00000001562	TDRD1	86	32.903	Ornithorhynchus_anatinus
ENSELUG00000024364	tdrd1	88	33.826	ENSOCUG00000025327	TDRD1	89	33.826	Oryctolagus_cuniculus
ENSELUG00000024364	tdrd1	99	45.204	ENSORLG00000004833	tdrd1	100	45.204	Oryzias_latipes
ENSELUG00000024364	tdrd1	99	45.394	ENSORLG00020019231	tdrd1	99	45.394	Oryzias_latipes_hni
ENSELUG00000024364	tdrd1	99	45.310	ENSORLG00015017184	tdrd1	99	45.310	Oryzias_latipes_hsok
ENSELUG00000024364	tdrd1	99	43.938	ENSOMEG00000023637	tdrd1	98	43.938	Oryzias_melastigma
ENSELUG00000024364	tdrd1	88	33.333	ENSOGAG00000001370	TDRD1	86	33.333	Otolemur_garnettii
ENSELUG00000024364	tdrd1	87	34.480	ENSOARG00000014200	-	86	34.480	Ovis_aries
ENSELUG00000024364	tdrd1	88	33.529	ENSPPAG00000041621	TDRD1	86	33.529	Pan_paniscus
ENSELUG00000024364	tdrd1	85	33.971	ENSPPRG00000000191	TDRD1	83	34.476	Panthera_pardus
ENSELUG00000024364	tdrd1	85	34.172	ENSPTIG00000010264	TDRD1	83	34.760	Panthera_tigris_altaica
ENSELUG00000024364	tdrd1	88	33.366	ENSPTRG00000002958	TDRD1	86	33.366	Pan_troglodytes
ENSELUG00000024364	tdrd1	89	34.078	ENSPANG00000020752	TDRD1	89	33.642	Papio_anubis
ENSELUG00000024364	tdrd1	94	45.173	ENSPKIG00000010586	tdrd1	92	45.350	Paramormyrops_kingsleyae
ENSELUG00000024364	tdrd1	89	33.607	ENSPSIG00000014655	TDRD1	87	33.698	Pelodiscus_sinensis
ENSELUG00000024364	tdrd1	78	67.647	ENSPMGG00000018890	tdrd1	94	67.647	Periophthalmus_magnuspinnatus
ENSELUG00000024364	tdrd1	89	33.607	ENSPEMG00000004582	Tdrd1	88	33.607	Peromyscus_maniculatus_bairdii
ENSELUG00000024364	tdrd1	75	30.159	ENSPMAG00000004416	-	100	30.159	Petromyzon_marinus
ENSELUG00000024364	tdrd1	85	36.408	ENSPCIG00000009739	TDRD1	83	36.408	Phascolarctos_cinereus
ENSELUG00000024364	tdrd1	91	43.544	ENSPFOG00000002145	tdrd1	99	43.544	Poecilia_formosa
ENSELUG00000024364	tdrd1	98	43.268	ENSPLAG00000010241	tdrd1	99	43.268	Poecilia_latipinna
ENSELUG00000024364	tdrd1	98	43.024	ENSPMEG00000021893	tdrd1	99	43.024	Poecilia_mexicana
ENSELUG00000024364	tdrd1	98	43.596	ENSPREG00000022663	tdrd1	99	43.596	Poecilia_reticulata
ENSELUG00000024364	tdrd1	89	32.276	ENSPPYG00000002671	TDRD1	85	32.276	Pongo_abelii
ENSELUG00000024364	tdrd1	82	32.374	ENSPCAG00000006692	TDRD1	70	32.374	Procavia_capensis
ENSELUG00000024364	tdrd1	98	31.391	ENSPCOG00000026619	TDRD1	88	33.525	Propithecus_coquereli
ENSELUG00000024364	tdrd1	88	32.683	ENSPVAG00000003055	TDRD1	87	32.683	Pteropus_vampyrus
ENSELUG00000024364	tdrd1	99	45.507	ENSPNYG00000001706	tdrd1	99	45.507	Pundamilia_nyererei
ENSELUG00000024364	tdrd1	98	52.170	ENSPNAG00000005831	tdrd1	97	52.170	Pygocentrus_nattereri
ENSELUG00000024364	tdrd1	89	34.144	ENSRNOG00000017064	Tdrd1	88	34.144	Rattus_norvegicus
ENSELUG00000024364	tdrd1	88	34.205	ENSRBIG00000029668	TDRD1	88	34.205	Rhinopithecus_bieti
ENSELUG00000024364	tdrd1	88	34.208	ENSRROG00000043379	TDRD1	87	33.766	Rhinopithecus_roxellana
ENSELUG00000024364	tdrd1	89	34.567	ENSSBOG00000023561	TDRD1	86	34.567	Saimiri_boliviensis_boliviensis
ENSELUG00000024364	tdrd1	85	33.205	ENSSHAG00000014311	TDRD1	84	33.140	Sarcophilus_harrisii
ENSELUG00000024364	tdrd1	87	45.024	ENSSFOG00015022020	tdrd1	95	45.024	Scleropages_formosus
ENSELUG00000024364	tdrd1	94	48.549	ENSSMAG00000019271	tdrd1	96	48.549	Scophthalmus_maximus
ENSELUG00000024364	tdrd1	91	52.007	ENSSDUG00000022012	tdrd1	95	52.007	Seriola_dumerili
ENSELUG00000024364	tdrd1	91	51.589	ENSSLDG00000006423	tdrd1	96	51.589	Seriola_lalandi_dorsalis
ENSELUG00000024364	tdrd1	88	40.000	ENSSARG00000008828	TDRD1	70	40.000	Sorex_araneus
ENSELUG00000024364	tdrd1	88	40.437	ENSSPUG00000005015	TDRD1	83	40.437	Sphenodon_punctatus
ENSELUG00000024364	tdrd1	99	47.587	ENSSPAG00000018805	tdrd1	99	47.587	Stegastes_partitus
ENSELUG00000024364	tdrd1	89	38.547	ENSSSCG00000021075	TDRD1	84	38.547	Sus_scrofa
ENSELUG00000024364	tdrd1	86	32.174	ENSTGUG00000010905	TDRD1	99	32.298	Taeniopygia_guttata
ENSELUG00000024364	tdrd1	83	48.662	ENSTRUG00000012142	tdrd1	99	47.201	Takifugu_rubripes
ENSELUG00000024364	tdrd1	83	39.811	ENSTNIG00000018898	tdrd1	100	39.172	Tetraodon_nigroviridis
ENSELUG00000024364	tdrd1	80	41.935	ENSTBEG00000014417	-	78	41.935	Tupaia_belangeri
ENSELUG00000024364	tdrd1	87	34.677	ENSTTRG00000010147	TDRD1	86	34.677	Tursiops_truncatus
ENSELUG00000024364	tdrd1	87	34.848	ENSUAMG00000009025	TDRD1	84	34.848	Ursus_americanus
ENSELUG00000024364	tdrd1	87	35.100	ENSUMAG00000000705	TDRD1	84	35.100	Ursus_maritimus
ENSELUG00000024364	tdrd1	87	33.835	ENSVPAG00000004000	TDRD1	80	33.835	Vicugna_pacos
ENSELUG00000024364	tdrd1	85	39.891	ENSVVUG00000009750	TDRD1	85	39.891	Vulpes_vulpes
ENSELUG00000024364	tdrd1	81	45.940	ENSXCOG00000006412	tdrd1	97	45.940	Xiphophorus_couchianus
ENSELUG00000024364	tdrd1	96	44.377	ENSXMAG00000008104	tdrd1	98	44.358	Xiphophorus_maculatus