EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000024534 (Gene tree)
Gene ID: 105028169
Gene Symbol: si:ch211-212k18.5
Alias: fb25b09|wu:fb25b09
Full Name: spalt like transcription factor 2
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 10193 bases
Position: chrLG24:8141198-8151390
Accession: 105028169
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000025881	zf-C2H2	PF00096.26	1.6e-15	1	2
ENSELUP00000025881	zf-C2H2	PF00096.26	1.6e-15	2	2
ENSELUP00000043059	zf-C2H2	PF00096.26	7e-13	1	1
ENSELUP00000043053	zf-C2H2	PF00096.26	9.9e-13	1	1
ENSELUP00000025881	zf-met	PF12874.7	3e-10	1	3
ENSELUP00000025881	zf-met	PF12874.7	3e-10	2	3
ENSELUP00000025881	zf-met	PF12874.7	3e-10	3	3
ENSELUP00000043053	zf-met	PF12874.7	2.8e-09	1	3
ENSELUP00000043053	zf-met	PF12874.7	2.8e-09	2	3
ENSELUP00000043053	zf-met	PF12874.7	2.8e-09	3	3
ENSELUP00000043059	zf-met	PF12874.7	4.2e-09	1	3
ENSELUP00000043059	zf-met	PF12874.7	4.2e-09	2	3
ENSELUP00000043059	zf-met	PF12874.7	4.2e-09	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000043781	-	3270	-	ENSELUP00000043059	1089 (aa)	-	-
ENSELUT00000043773	-	5633	-	ENSELUP00000043053	1152 (aa)	-	-
ENSELUT00000043772	-	5506	XM_020043170	ENSELUP00000025881	1201 (aa)	XP_019898729	UPI0009734837

Gene Model

Click here to download ENSELUG00000024534's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000024534's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000024534	si:ch211-212k18.5	54	45.526	ENSAPOG00000015347	sall2	54	44.890	Acanthochromis_polyacanthus
ENSELUG00000024534	si:ch211-212k18.5	100	56.121	ENSAPOG00000013387	si:ch211-212k18.5	99	58.406	Acanthochromis_polyacanthus
ENSELUG00000024534	si:ch211-212k18.5	81	61.765	ENSACIG00000019922	si:ch211-212k18.5	95	65.890	Amphilophus_citrinellus
ENSELUG00000024534	si:ch211-212k18.5	56	40.722	ENSAOCG00000016559	sall2	54	44.530	Amphiprion_ocellaris
ENSELUG00000024534	si:ch211-212k18.5	100	56.699	ENSAOCG00000010737	si:ch211-212k18.5	99	57.723	Amphiprion_ocellaris
ENSELUG00000024534	si:ch211-212k18.5	100	56.778	ENSAPEG00000006751	si:ch211-212k18.5	99	57.803	Amphiprion_percula
ENSELUG00000024534	si:ch211-212k18.5	50	64.151	ENSATEG00000007303	sall2	51	59.322	Anabas_testudineus
ENSELUG00000024534	si:ch211-212k18.5	73	67.175	ENSATEG00000001254	si:ch211-212k18.5	92	68.273	Anabas_testudineus
ENSELUG00000024534	si:ch211-212k18.5	99	58.240	ENSACLG00000009709	si:ch211-212k18.5	99	58.373	Astatotilapia_calliptera
ENSELUG00000024534	si:ch211-212k18.5	57	49.254	ENSAMXG00000020956	sall2	63	49.254	Astyanax_mexicanus
ENSELUG00000024534	si:ch211-212k18.5	97	54.377	ENSAMXG00000010979	si:ch211-212k18.5	99	51.505	Astyanax_mexicanus
ENSELUG00000024534	si:ch211-212k18.5	99	55.901	ENSCSEG00000004426	si:ch211-212k18.5	99	55.476	Cynoglossus_semilaevis
ENSELUG00000024534	si:ch211-212k18.5	76	40.917	ENSCSEG00000021148	sall2	79	36.847	Cynoglossus_semilaevis
ENSELUG00000024534	si:ch211-212k18.5	55	45.308	ENSCVAG00000006032	sall2	60	44.122	Cyprinodon_variegatus
ENSELUG00000024534	si:ch211-212k18.5	99	55.439	ENSCVAG00000007475	si:ch211-212k18.5	99	56.100	Cyprinodon_variegatus
ENSELUG00000024534	si:ch211-212k18.5	98	55.476	ENSDARG00000103316	si:ch211-212k18.5	94	54.675	Danio_rerio
ENSELUG00000024534	si:ch211-212k18.5	55	47.807	ENSDARG00000075116	sall2	58	47.750	Danio_rerio
ENSELUG00000024534	si:ch211-212k18.5	97	57.658	ENSFHEG00000017264	si:ch211-212k18.5	98	56.373	Fundulus_heteroclitus
ENSELUG00000024534	si:ch211-212k18.5	81	37.817	ENSFHEG00000017550	sall2	89	33.219	Fundulus_heteroclitus
ENSELUG00000024534	si:ch211-212k18.5	99	55.847	ENSGAFG00000003746	si:ch211-212k18.5	99	55.812	Gambusia_affinis
ENSELUG00000024534	si:ch211-212k18.5	56	45.140	ENSGAFG00000015194	sall2	59	44.137	Gambusia_affinis
ENSELUG00000024534	si:ch211-212k18.5	99	58.494	ENSHBUG00000019672	si:ch211-212k18.5	99	59.544	Haplochromis_burtoni
ENSELUG00000024534	si:ch211-212k18.5	97	55.556	ENSHCOG00000002842	si:ch211-212k18.5	98	53.697	Hippocampus_comes
ENSELUG00000024534	si:ch211-212k18.5	99	52.298	ENSIPUG00000002559	sall2	99	51.467	Ictalurus_punctatus
ENSELUG00000024534	si:ch211-212k18.5	100	54.739	ENSKMAG00000019657	si:ch211-212k18.5	99	56.354	Kryptolebias_marmoratus
ENSELUG00000024534	si:ch211-212k18.5	55	42.991	ENSKMAG00000020172	sall2	59	44.213	Kryptolebias_marmoratus
ENSELUG00000024534	si:ch211-212k18.5	97	57.755	ENSLBEG00000020887	si:ch211-212k18.5	99	56.581	Labrus_bergylta
ENSELUG00000024534	si:ch211-212k18.5	55	44.661	ENSMAMG00000016229	sall2	59	44.659	Mastacembelus_armatus
ENSELUG00000024534	si:ch211-212k18.5	73	67.409	ENSMAMG00000015887	si:ch211-212k18.5	98	68.118	Mastacembelus_armatus
ENSELUG00000024534	si:ch211-212k18.5	99	58.400	ENSMZEG00005021214	si:ch211-212k18.5	99	58.533	Maylandia_zebra
ENSELUG00000024534	si:ch211-212k18.5	87	65.544	ENSMMOG00000012726	si:ch211-212k18.5	98	66.554	Mola_mola
ENSELUG00000024534	si:ch211-212k18.5	96	58.291	ENSMALG00000000979	si:ch211-212k18.5	98	58.326	Monopterus_albus
ENSELUG00000024534	si:ch211-212k18.5	97	39.825	ENSNBRG00000017645	sall2	99	38.966	Neolamprologus_brichardi
ENSELUG00000024534	si:ch211-212k18.5	97	60.143	ENSNBRG00000023948	si:ch211-212k18.5	96	60.107	Neolamprologus_brichardi
ENSELUG00000024534	si:ch211-212k18.5	99	54.485	ENSORLG00000030429	si:ch211-212k18.5	98	54.852	Oryzias_latipes
ENSELUG00000024534	si:ch211-212k18.5	99	54.561	ENSORLG00020008145	si:ch211-212k18.5	98	55.255	Oryzias_latipes_hni
ENSELUG00000024534	si:ch211-212k18.5	60	43.550	ENSORLG00020007873	sall2	62	44.652	Oryzias_latipes_hni
ENSELUG00000024534	si:ch211-212k18.5	99	54.243	ENSORLG00015004982	si:ch211-212k18.5	98	55.337	Oryzias_latipes_hsok
ENSELUG00000024534	si:ch211-212k18.5	61	43.371	ENSOMEG00000012904	sall2	65	43.341	Oryzias_melastigma
ENSELUG00000024534	si:ch211-212k18.5	98	55.004	ENSOMEG00000013949	si:ch211-212k18.5	98	55.257	Oryzias_melastigma
ENSELUG00000024534	si:ch211-212k18.5	98	55.676	ENSPMGG00000018714	si:ch211-212k18.5	99	55.556	Periophthalmus_magnuspinnatus
ENSELUG00000024534	si:ch211-212k18.5	99	55.859	ENSPFOG00000023705	si:ch211-212k18.5	100	57.094	Poecilia_formosa
ENSELUG00000024534	si:ch211-212k18.5	56	46.089	ENSPFOG00000016504	sall2	62	44.460	Poecilia_formosa
ENSELUG00000024534	si:ch211-212k18.5	56	44.016	ENSPLAG00000018320	sall2	60	44.327	Poecilia_latipinna
ENSELUG00000024534	si:ch211-212k18.5	99	56.064	ENSPLAG00000002577	si:ch211-212k18.5	99	55.868	Poecilia_latipinna
ENSELUG00000024534	si:ch211-212k18.5	99	55.868	ENSPMEG00000016395	si:ch211-212k18.5	100	57.106	Poecilia_mexicana
ENSELUG00000024534	si:ch211-212k18.5	56	44.149	ENSPMEG00000006335	sall2	60	44.591	Poecilia_mexicana
ENSELUG00000024534	si:ch211-212k18.5	99	55.476	ENSPREG00000005292	si:ch211-212k18.5	99	56.010	Poecilia_reticulata
ENSELUG00000024534	si:ch211-212k18.5	56	43.444	ENSPREG00000021908	sall2	60	43.570	Poecilia_reticulata
ENSELUG00000024534	si:ch211-212k18.5	97	59.358	ENSPNYG00000021576	si:ch211-212k18.5	99	56.522	Pundamilia_nyererei
ENSELUG00000024534	si:ch211-212k18.5	98	55.694	ENSPNAG00000006123	si:ch211-212k18.5	99	53.163	Pygocentrus_nattereri
ENSELUG00000024534	si:ch211-212k18.5	55	48.227	ENSPNAG00000021463	sall2	58	47.118	Pygocentrus_nattereri
ENSELUG00000024534	si:ch211-212k18.5	78	41.591	ENSSMAG00000014157	sall2	67	43.402	Scophthalmus_maximus
ENSELUG00000024534	si:ch211-212k18.5	99	56.064	ENSSMAG00000006241	si:ch211-212k18.5	99	57.154	Scophthalmus_maximus
ENSELUG00000024534	si:ch211-212k18.5	99	57.803	ENSSDUG00000006164	si:ch211-212k18.5	99	58.725	Seriola_dumerili
ENSELUG00000024534	si:ch211-212k18.5	51	79.487	ENSSDUG00000012274	sall2	54	44.850	Seriola_dumerili
ENSELUG00000024534	si:ch211-212k18.5	72	41.538	ENSSLDG00000001653	sall2	54	44.589	Seriola_lalandi_dorsalis
ENSELUG00000024534	si:ch211-212k18.5	99	58.964	ENSSLDG00000003393	si:ch211-212k18.5	99	59.569	Seriola_lalandi_dorsalis
ENSELUG00000024534	si:ch211-212k18.5	99	57.119	ENSSPAG00000013435	si:ch211-212k18.5	97	59.737	Stegastes_partitus
ENSELUG00000024534	si:ch211-212k18.5	54	46.113	ENSSPAG00000023009	sall2	61	45.017	Stegastes_partitus
ENSELUG00000024534	si:ch211-212k18.5	73	65.728	ENSTRUG00000025082	si:ch211-212k18.5	92	65.311	Takifugu_rubripes
ENSELUG00000024534	si:ch211-212k18.5	57	42.691	ENSTRUG00000024556	sall2	59	43.197	Takifugu_rubripes
ENSELUG00000024534	si:ch211-212k18.5	99	55.016	ENSXCOG00000000762	si:ch211-212k18.5	99	54.473	Xiphophorus_couchianus
ENSELUG00000024534	si:ch211-212k18.5	99	55.644	ENSXMAG00000001461	si:ch211-212k18.5	99	55.415	Xiphophorus_maculatus
ENSELUG00000024534	si:ch211-212k18.5	56	43.857	ENSXMAG00000000902	sall2	60	44.037	Xiphophorus_maculatus