EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000024537 (Gene tree)
Gene ID: 105023053
Gene Symbol: tdrkh
Alias: TDRD2|zgc:113056
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 10000 bases
Position: chrLG05:14828533-14838532
Accession: 105023053
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000043029	KH_1	PF00013.29	2.7e-17	1	1
ENSELUP00000043007	KH_1	PF00013.29	7.3e-17	1	1
ENSELUP00000025832	KH_1	PF00013.29	7.9e-17	1	1
ENSELUP00000025841	KH_1	PF00013.29	2.6e-15	1	1
ENSELUP00000025841	TUDOR	PF00567.24	4.9e-25	1	1
ENSELUP00000043029	TUDOR	PF00567.24	7.8e-25	1	1
ENSELUP00000043007	TUDOR	PF00567.24	1.4e-24	1	1
ENSELUP00000025832	TUDOR	PF00567.24	1.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000037596	-	3172	-	ENSELUP00000043007	923 (aa)	-	-
ENSELUT00000037604	-	3281	-	ENSELUP00000025832	957 (aa)	-	-
ENSELUT00000037641	-	3065	XM_020046214	ENSELUP00000043029	594 (aa)	XP_019901773	-
ENSELUT00000043749	-	1614	-	ENSELUP00000025841	537 (aa)	-	-

Gene Model

Click here to download ENSELUG00000024537's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000024537's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000024537	tdrkh	100	65.833	ENSAPOG00000012653	tdrkh	100	66.549	Acanthochromis_polyacanthus
ENSELUG00000024537	tdrkh	91	63.187	ENSACIG00000010318	tdrkh	99	63.254	Amphilophus_citrinellus
ENSELUG00000024537	tdrkh	97	64.652	ENSAOCG00000020623	tdrkh	100	66.726	Amphiprion_ocellaris
ENSELUG00000024537	tdrkh	94	66.372	ENSAPEG00000018388	tdrkh	100	66.903	Amphiprion_percula
ENSELUG00000024537	tdrkh	100	66.057	ENSATEG00000023809	tdrkh	100	66.608	Anabas_testudineus
ENSELUG00000024537	tdrkh	94	63.894	ENSACLG00000003017	tdrkh	100	63.894	Astatotilapia_calliptera
ENSELUG00000024537	tdrkh	99	66.949	ENSAMXG00000011664	tdrkh	99	66.949	Astyanax_mexicanus
ENSELUG00000024537	tdrkh	95	59.278	ENSCSEG00000002894	tdrkh	100	59.450	Cynoglossus_semilaevis
ENSELUG00000024537	tdrkh	61	72.816	ENSCVAG00000020347	tdrkh	78	72.816	Cyprinodon_variegatus
ENSELUG00000024537	tdrkh	99	63.529	ENSDARG00000053474	tdrkh	99	63.529	Danio_rerio
ENSELUG00000024537	tdrkh	94	64.937	ENSFHEG00000003544	tdrkh	100	64.937	Fundulus_heteroclitus
ENSELUG00000024537	tdrkh	100	61.849	ENSGMOG00000009304	tdrkh	100	61.849	Gadus_morhua
ENSELUG00000024537	tdrkh	94	62.172	ENSGAFG00000010754	tdrkh	100	62.172	Gambusia_affinis
ENSELUG00000024537	tdrkh	100	63.495	ENSGACG00000015258	tdrkh	100	63.495	Gasterosteus_aculeatus
ENSELUG00000024537	tdrkh	94	64.071	ENSHBUG00000017609	tdrkh	100	64.071	Haplochromis_burtoni
ENSELUG00000024537	tdrkh	94	65.385	ENSIPUG00000009673	tdrkh	99	65.385	Ictalurus_punctatus
ENSELUG00000024537	tdrkh	100	63.167	ENSKMAG00000016638	tdrkh	98	63.167	Kryptolebias_marmoratus
ENSELUG00000024537	tdrkh	96	64.716	ENSLBEG00000027323	tdrkh	99	64.716	Labrus_bergylta
ENSELUG00000024537	tdrkh	99	53.322	ENSLOCG00000011381	tdrkh	99	53.322	Lepisosteus_oculatus
ENSELUG00000024537	tdrkh	94	64.349	ENSMAMG00000020343	tdrkh	100	64.349	Mastacembelus_armatus
ENSELUG00000024537	tdrkh	94	63.894	ENSMZEG00005006755	tdrkh	100	63.894	Maylandia_zebra
ENSELUG00000024537	tdrkh	97	64.583	ENSMMOG00000020663	tdrkh	96	64.372	Mola_mola
ENSELUG00000024537	tdrkh	94	64.894	ENSMALG00000015401	tdrkh	100	64.894	Monopterus_albus
ENSELUG00000024537	tdrkh	94	61.062	ENSNBRG00000023815	tdrkh	100	61.062	Neolamprologus_brichardi
ENSELUG00000024537	tdrkh	94	62.589	ENSORLG00000029204	tdrkh	99	62.589	Oryzias_latipes
ENSELUG00000024537	tdrkh	90	61.754	ENSORLG00020016168	tdrkh	99	61.754	Oryzias_latipes_hni
ENSELUG00000024537	tdrkh	94	60.286	ENSORLG00015014094	tdrkh	99	60.286	Oryzias_latipes_hsok
ENSELUG00000024537	tdrkh	97	61.005	ENSOMEG00000015063	tdrkh	94	61.005	Oryzias_melastigma
ENSELUG00000024537	tdrkh	97	59.354	ENSPKIG00000017597	tdrkh	100	62.148	Paramormyrops_kingsleyae
ENSELUG00000024537	tdrkh	93	62.039	ENSPMGG00000019362	tdrkh	99	62.039	Periophthalmus_magnuspinnatus
ENSELUG00000024537	tdrkh	100	61.360	ENSPFOG00000013032	tdrkh	100	61.360	Poecilia_formosa
ENSELUG00000024537	tdrkh	94	63.028	ENSPLAG00000004193	tdrkh	100	63.028	Poecilia_latipinna
ENSELUG00000024537	tdrkh	94	62.721	ENSPMEG00000016502	tdrkh	100	62.721	Poecilia_mexicana
ENSELUG00000024537	tdrkh	100	59.764	ENSPREG00000004213	tdrkh	100	59.764	Poecilia_reticulata
ENSELUG00000024537	tdrkh	91	63.620	ENSPNYG00000022818	tdrkh	97	63.686	Pundamilia_nyererei
ENSELUG00000024537	tdrkh	99	65.886	ENSPNAG00000008783	tdrkh	99	65.886	Pygocentrus_nattereri
ENSELUG00000024537	tdrkh	94	60.071	ENSSFOG00015001048	tdrkh	100	60.424	Scleropages_formosus
ENSELUG00000024537	tdrkh	97	63.853	ENSSMAG00000001532	tdrkh	100	65.901	Scophthalmus_maximus
ENSELUG00000024537	tdrkh	94	65.278	ENSSDUG00000013393	tdrkh	100	66.373	Seriola_dumerili
ENSELUG00000024537	tdrkh	100	65.523	ENSSLDG00000017418	tdrkh	100	67.254	Seriola_lalandi_dorsalis
ENSELUG00000024537	tdrkh	100	67.833	ENSSPAG00000006435	tdrkh	100	68.167	Stegastes_partitus
ENSELUG00000024537	tdrkh	91	60.806	ENSTRUG00000006644	tdrkh	97	60.806	Takifugu_rubripes
ENSELUG00000024537	tdrkh	94	60.315	ENSTNIG00000003157	tdrkh	99	60.315	Tetraodon_nigroviridis
ENSELUG00000024537	tdrkh	87	68.493	ENSXCOG00000016972	tdrkh	98	72.222	Xiphophorus_couchianus
ENSELUG00000024537	tdrkh	94	60.644	ENSXMAG00000014756	tdrkh	100	60.644	Xiphophorus_maculatus