EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000024580 (Gene tree)
Gene ID: 105024905
Gene Symbol: cnot6a
Alias: cnot6|wu:fa03c11|wu:fc17f01|zgc:65822
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 21444 bases
Position: chrLG07:5847729-5869172
Accession: 105024905
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000043086	Exo_endo_phos	PF03372.23	1.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000037725	-	6650	XM_010895193	ENSELUP00000043086	557 (aa)	XP_010893495	UPI0005766C36

Gene Model

Click here to download ENSELUG00000024580's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000024580's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000024580	cnot6a	100	86.292	ENSELUG00000015981	cnot6b	99	86.292
ENSELUG00000024580	cnot6a	99	72.202	ENSELUG00000013353	cnot6l	87	72.202

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000024580	cnot6a	100	81.900	ENSG00000113300	CNOT6	99	92.105	Homo_sapiens
ENSELUG00000024580	cnot6a	100	87.657	ENSAPOG00000009994	cnot6b	100	87.657	Acanthochromis_polyacanthus
ENSELUG00000024580	cnot6a	100	81.964	ENSAMEG00000000949	CNOT6	99	81.964	Ailuropoda_melanoleuca
ENSELUG00000024580	cnot6a	100	86.918	ENSACIG00000016566	cnot6b	100	86.918	Amphilophus_citrinellus
ENSELUG00000024580	cnot6a	100	87.657	ENSAOCG00000006893	cnot6b	100	87.657	Amphiprion_ocellaris
ENSELUG00000024580	cnot6a	100	87.657	ENSAPEG00000016949	cnot6b	100	87.657	Amphiprion_percula
ENSELUG00000024580	cnot6a	100	85.868	ENSATEG00000007862	cnot6b	100	85.868	Anabas_testudineus
ENSELUG00000024580	cnot6a	100	83.513	ENSAPLG00000012715	CNOT6	99	83.513	Anas_platyrhynchos
ENSELUG00000024580	cnot6a	100	82.796	ENSACAG00000016548	CNOT6	100	82.796	Anolis_carolinensis
ENSELUG00000024580	cnot6a	100	81.900	ENSANAG00000030436	CNOT6	96	81.900	Aotus_nancymaae
ENSELUG00000024580	cnot6a	100	86.047	ENSACLG00000008279	cnot6b	100	86.583	Astatotilapia_calliptera
ENSELUG00000024580	cnot6a	100	84.946	ENSAMXG00000034694	cnot6b	100	84.946	Astyanax_mexicanus
ENSELUG00000024580	cnot6a	100	89.048	ENSAMXG00000019140	cnot6a	100	89.048	Astyanax_mexicanus
ENSELUG00000024580	cnot6a	100	82.258	ENSBTAG00000017362	CNOT6	100	82.258	Bos_taurus
ENSELUG00000024580	cnot6a	100	82.437	ENSCJAG00000009795	CNOT6	100	82.437	Callithrix_jacchus
ENSELUG00000024580	cnot6a	100	82.258	ENSCAFG00000000464	CNOT6	100	82.258	Canis_familiaris
ENSELUG00000024580	cnot6a	100	82.258	ENSCAFG00020002441	CNOT6	100	82.258	Canis_lupus_dingo
ENSELUG00000024580	cnot6a	100	81.900	ENSCHIG00000019100	CNOT6	100	81.900	Capra_hircus
ENSELUG00000024580	cnot6a	100	81.362	ENSTSYG00000003982	CNOT6	100	81.362	Carlito_syrichta
ENSELUG00000024580	cnot6a	100	77.778	ENSCPOG00000035657	CNOT6	100	77.778	Cavia_porcellus
ENSELUG00000024580	cnot6a	100	77.419	ENSCCAG00000033670	CNOT6	100	77.419	Cebus_capucinus
ENSELUG00000024580	cnot6a	100	81.900	ENSCATG00000042014	CNOT6	100	81.900	Cercocebus_atys
ENSELUG00000024580	cnot6a	100	81.004	ENSCLAG00000010489	CNOT6	100	81.004	Chinchilla_lanigera
ENSELUG00000024580	cnot6a	100	81.900	ENSCSAG00000008165	CNOT6	100	81.900	Chlorocebus_sabaeus
ENSELUG00000024580	cnot6a	100	81.541	ENSCHOG00000009680	CNOT6	100	81.541	Choloepus_hoffmanni
ENSELUG00000024580	cnot6a	100	83.692	ENSCPBG00000008908	CNOT6	100	83.692	Chrysemys_picta_bellii
ENSELUG00000024580	cnot6a	100	82.079	ENSCANG00000026756	CNOT6	100	82.079	Colobus_angolensis_palliatus
ENSELUG00000024580	cnot6a	100	80.790	ENSCGRG00001011452	Cnot6	100	80.790	Cricetulus_griseus_chok1gshd
ENSELUG00000024580	cnot6a	100	78.853	ENSCGRG00000010407	Cnot6	100	78.853	Cricetulus_griseus_crigri
ENSELUG00000024580	cnot6a	100	87.299	ENSCSEG00000010939	cnot6b	100	87.299	Cynoglossus_semilaevis
ENSELUG00000024580	cnot6a	100	86.762	ENSCVAG00000010538	cnot6b	100	86.762	Cyprinodon_variegatus
ENSELUG00000024580	cnot6a	100	82.437	ENSDARG00000101072	cnot6b	100	82.437	Danio_rerio
ENSELUG00000024580	cnot6a	100	88.151	ENSDARG00000008255	cnot6a	100	88.151	Danio_rerio
ENSELUG00000024580	cnot6a	100	82.616	ENSDNOG00000041644	CNOT6	100	82.616	Dasypus_novemcinctus
ENSELUG00000024580	cnot6a	100	74.552	ENSDORG00000001708	Cnot6	100	74.552	Dipodomys_ordii
ENSELUG00000024580	cnot6a	100	65.295	ENSETEG00000006975	CNOT6	100	65.295	Echinops_telfairi
ENSELUG00000024580	cnot6a	90	77.600	ENSEASG00005012957	-	99	77.600	Equus_asinus_asinus
ENSELUG00000024580	cnot6a	100	81.900	ENSEASG00005012794	-	100	81.900	Equus_asinus_asinus
ENSELUG00000024580	cnot6a	100	77.558	ENSECAG00000012704	-	99	77.558	Equus_caballus
ENSELUG00000024580	cnot6a	100	82.437	ENSECAG00000019325	CNOT6	100	82.437	Equus_caballus
ENSELUG00000024580	cnot6a	100	81.362	ENSEEUG00000015382	CNOT6	100	81.362	Erinaceus_europaeus
ENSELUG00000024580	cnot6a	100	82.616	ENSFCAG00000001881	CNOT6	100	82.616	Felis_catus
ENSELUG00000024580	cnot6a	100	83.692	ENSFALG00000007699	CNOT6	100	83.692	Ficedula_albicollis
ENSELUG00000024580	cnot6a	100	80.824	ENSFDAG00000001999	CNOT6	100	80.824	Fukomys_damarensis
ENSELUG00000024580	cnot6a	65	90.476	ENSFHEG00000013756	cnot6b	96	90.476	Fundulus_heteroclitus
ENSELUG00000024580	cnot6a	95	88.280	ENSGMOG00000009767	cnot6b	99	88.280	Gadus_morhua
ENSELUG00000024580	cnot6a	100	83.513	ENSGALG00000034316	CNOT6	100	83.513	Gallus_gallus
ENSELUG00000024580	cnot6a	100	86.225	ENSGAFG00000008525	cnot6b	100	86.225	Gambusia_affinis
ENSELUG00000024580	cnot6a	95	87.146	ENSGACG00000018046	cnot6b	99	87.146	Gasterosteus_aculeatus
ENSELUG00000024580	cnot6a	100	68.873	ENSGAGG00000012176	CNOT6	100	68.873	Gopherus_agassizii
ENSELUG00000024580	cnot6a	100	81.900	ENSGGOG00000003675	CNOT6	100	81.900	Gorilla_gorilla
ENSELUG00000024580	cnot6a	100	86.225	ENSHBUG00000002819	cnot6b	100	86.762	Haplochromis_burtoni
ENSELUG00000024580	cnot6a	100	80.824	ENSHGLG00000017756	CNOT6	100	80.824	Heterocephalus_glaber_female
ENSELUG00000024580	cnot6a	100	80.824	ENSHGLG00100005747	CNOT6	100	80.824	Heterocephalus_glaber_male
ENSELUG00000024580	cnot6a	100	85.842	ENSHCOG00000016176	cnot6b	100	86.380	Hippocampus_comes
ENSELUG00000024580	cnot6a	100	84.050	ENSIPUG00000017482	cnot6b	100	84.050	Ictalurus_punctatus
ENSELUG00000024580	cnot6a	100	88.510	ENSIPUG00000019831	cnot6a	100	88.510	Ictalurus_punctatus
ENSELUG00000024580	cnot6a	100	82.079	ENSSTOG00000002803	CNOT6	100	82.079	Ictidomys_tridecemlineatus
ENSELUG00000024580	cnot6a	100	81.183	ENSJJAG00000012296	Cnot6	100	81.183	Jaculus_jaculus
ENSELUG00000024580	cnot6a	100	86.404	ENSKMAG00000004640	cnot6b	100	86.404	Kryptolebias_marmoratus
ENSELUG00000024580	cnot6a	100	86.762	ENSLBEG00000027917	cnot6b	100	87.299	Labrus_bergylta
ENSELUG00000024580	cnot6a	100	88.172	ENSLOCG00000010102	cnot6b	99	88.172	Lepisosteus_oculatus
ENSELUG00000024580	cnot6a	100	82.975	ENSLAFG00000016742	CNOT6	100	82.975	Loxodonta_africana
ENSELUG00000024580	cnot6a	100	81.900	ENSMFAG00000030867	CNOT6	100	81.900	Macaca_fascicularis
ENSELUG00000024580	cnot6a	100	81.900	ENSMMUG00000018690	CNOT6	100	81.900	Macaca_mulatta
ENSELUG00000024580	cnot6a	100	81.900	ENSMNEG00000038565	CNOT6	100	81.900	Macaca_nemestrina
ENSELUG00000024580	cnot6a	100	81.900	ENSMLEG00000010555	CNOT6	100	81.900	Mandrillus_leucophaeus
ENSELUG00000024580	cnot6a	100	87.835	ENSMAMG00000007515	cnot6b	100	87.835	Mastacembelus_armatus
ENSELUG00000024580	cnot6a	100	86.047	ENSMZEG00005012899	cnot6b	100	86.583	Maylandia_zebra
ENSELUG00000024580	cnot6a	100	81.183	ENSMAUG00000019798	Cnot6	100	81.183	Mesocricetus_auratus
ENSELUG00000024580	cnot6a	100	80.287	ENSMICG00000013018	-	100	80.287	Microcebus_murinus
ENSELUG00000024580	cnot6a	98	73.761	ENSMICG00000028378	-	99	73.761	Microcebus_murinus
ENSELUG00000024580	cnot6a	100	81.183	ENSMOCG00000021662	Cnot6	100	81.183	Microtus_ochrogaster
ENSELUG00000024580	cnot6a	100	86.176	ENSMMOG00000003227	cnot6b	100	86.176	Mola_mola
ENSELUG00000024580	cnot6a	100	83.333	ENSMODG00000003979	CNOT6	100	83.333	Monodelphis_domestica
ENSELUG00000024580	cnot6a	100	87.478	ENSMALG00000014251	cnot6b	100	87.478	Monopterus_albus
ENSELUG00000024580	cnot6a	100	81.362	MGP_CAROLIEiJ_G0016277	Cnot6	100	81.362	Mus_caroli
ENSELUG00000024580	cnot6a	100	81.362	ENSMUSG00000020362	Cnot6	100	81.362	Mus_musculus
ENSELUG00000024580	cnot6a	100	81.362	MGP_PahariEiJ_G0017413	Cnot6	100	81.362	Mus_pahari
ENSELUG00000024580	cnot6a	100	81.362	MGP_SPRETEiJ_G0017122	Cnot6	100	81.362	Mus_spretus
ENSELUG00000024580	cnot6a	100	82.258	ENSMPUG00000000587	CNOT6	96	82.258	Mustela_putorius_furo
ENSELUG00000024580	cnot6a	100	80.995	ENSMLUG00000010257	CNOT6	100	80.995	Myotis_lucifugus
ENSELUG00000024580	cnot6a	100	81.183	ENSNGAG00000008269	Cnot6	100	81.183	Nannospalax_galili
ENSELUG00000024580	cnot6a	100	86.225	ENSNBRG00000010798	cnot6b	100	86.762	Neolamprologus_brichardi
ENSELUG00000024580	cnot6a	100	81.149	ENSNLEG00000002322	CNOT6	100	81.149	Nomascus_leucogenys
ENSELUG00000024580	cnot6a	81	79.535	ENSMEUG00000000025	CNOT6	81	79.535	Notamacropus_eugenii
ENSELUG00000024580	cnot6a	88	82.381	ENSOPRG00000008244	-	88	82.381	Ochotona_princeps
ENSELUG00000024580	cnot6a	100	80.466	ENSODEG00000007041	CNOT6	100	80.466	Octodon_degus
ENSELUG00000024580	cnot6a	75	88.180	ENSONIG00000013027	cnot6b	99	88.180	Oreochromis_niloticus
ENSELUG00000024580	cnot6a	100	82.437	ENSOANG00000010226	CNOT6	100	82.437	Ornithorhynchus_anatinus
ENSELUG00000024580	cnot6a	100	81.607	ENSOCUG00000011083	CNOT6	100	81.607	Oryctolagus_cuniculus
ENSELUG00000024580	cnot6a	100	86.583	ENSORLG00000005059	cnot6b	100	86.583	Oryzias_latipes
ENSELUG00000024580	cnot6a	100	86.583	ENSORLG00020012784	cnot6b	100	86.583	Oryzias_latipes_hni
ENSELUG00000024580	cnot6a	94	85.660	ENSORLG00015022658	cnot6b	98	85.660	Oryzias_latipes_hsok
ENSELUG00000024580	cnot6a	100	87.120	ENSOMEG00000005295	cnot6b	100	87.120	Oryzias_melastigma
ENSELUG00000024580	cnot6a	94	81.143	ENSOGAG00000032470	CNOT6	100	81.143	Otolemur_garnettii
ENSELUG00000024580	cnot6a	97	81.215	ENSOARG00000001003	CNOT6	100	81.215	Ovis_aries
ENSELUG00000024580	cnot6a	100	81.900	ENSPPAG00000032253	CNOT6	100	81.900	Pan_paniscus
ENSELUG00000024580	cnot6a	100	82.616	ENSPPRG00000011912	CNOT6	100	82.616	Panthera_pardus
ENSELUG00000024580	cnot6a	100	82.616	ENSPTIG00000016794	CNOT6	100	82.616	Panthera_tigris_altaica
ENSELUG00000024580	cnot6a	100	81.900	ENSPTRG00000017636	CNOT6	100	81.900	Pan_troglodytes
ENSELUG00000024580	cnot6a	100	81.900	ENSPANG00000016191	CNOT6	100	81.900	Papio_anubis
ENSELUG00000024580	cnot6a	100	86.738	ENSPKIG00000021368	cnot6b	100	86.738	Paramormyrops_kingsleyae
ENSELUG00000024580	cnot6a	98	83.119	ENSPSIG00000017307	CNOT6	100	83.119	Pelodiscus_sinensis
ENSELUG00000024580	cnot6a	100	87.634	ENSPMGG00000011238	cnot6b	100	87.634	Periophthalmus_magnuspinnatus
ENSELUG00000024580	cnot6a	100	80.824	ENSPEMG00000000627	Cnot6	100	80.824	Peromyscus_maniculatus_bairdii
ENSELUG00000024580	cnot6a	100	83.513	ENSPCIG00000020319	CNOT6	99	83.513	Phascolarctos_cinereus
ENSELUG00000024580	cnot6a	100	86.941	ENSPFOG00000006291	cnot6b	100	86.941	Poecilia_formosa
ENSELUG00000024580	cnot6a	100	84.588	ENSPLAG00000008266	cnot6b	100	84.588	Poecilia_latipinna
ENSELUG00000024580	cnot6a	100	87.120	ENSPMEG00000009091	cnot6b	100	87.120	Poecilia_mexicana
ENSELUG00000024580	cnot6a	100	86.559	ENSPREG00000003713	cnot6b	100	86.559	Poecilia_reticulata
ENSELUG00000024580	cnot6a	100	81.900	ENSPPYG00000016137	CNOT6	100	81.900	Pongo_abelii
ENSELUG00000024580	cnot6a	60	91.892	ENSPCAG00000005599	-	59	91.892	Procavia_capensis
ENSELUG00000024580	cnot6a	100	76.344	ENSPCOG00000017359	CNOT6	100	77.061	Propithecus_coquereli
ENSELUG00000024580	cnot6a	100	78.495	ENSPVAG00000003069	CNOT6	100	78.495	Pteropus_vampyrus
ENSELUG00000024580	cnot6a	100	85.868	ENSPNYG00000000321	cnot6b	100	86.404	Pundamilia_nyererei
ENSELUG00000024580	cnot6a	100	85.484	ENSPNAG00000028816	cnot6b	100	85.484	Pygocentrus_nattereri
ENSELUG00000024580	cnot6a	100	89.228	ENSPNAG00000029586	cnot6a	100	89.228	Pygocentrus_nattereri
ENSELUG00000024580	cnot6a	100	80.824	ENSRNOG00000054891	Cnot6	100	80.824	Rattus_norvegicus
ENSELUG00000024580	cnot6a	100	81.900	ENSRBIG00000004309	CNOT6	100	81.900	Rhinopithecus_bieti
ENSELUG00000024580	cnot6a	100	81.900	ENSRROG00000035378	CNOT6	100	81.900	Rhinopithecus_roxellana
ENSELUG00000024580	cnot6a	100	82.079	ENSSBOG00000030494	CNOT6	100	82.079	Saimiri_boliviensis_boliviensis
ENSELUG00000024580	cnot6a	100	83.333	ENSSHAG00000017436	CNOT6	100	83.333	Sarcophilus_harrisii
ENSELUG00000024580	cnot6a	100	87.814	ENSSFOG00015022383	cnot6a	96	87.814	Scleropages_formosus
ENSELUG00000024580	cnot6a	100	87.993	ENSSFOG00015015133	CNOT6	100	87.993	Scleropages_formosus
ENSELUG00000024580	cnot6a	100	86.583	ENSSMAG00000003084	cnot6b	100	86.583	Scophthalmus_maximus
ENSELUG00000024580	cnot6a	100	87.835	ENSSDUG00000004151	cnot6b	100	87.835	Seriola_dumerili
ENSELUG00000024580	cnot6a	100	87.299	ENSSLDG00000004448	cnot6b	100	87.835	Seriola_lalandi_dorsalis
ENSELUG00000024580	cnot6a	64	64.624	ENSSARG00000012650	-	100	64.624	Sorex_araneus
ENSELUG00000024580	cnot6a	100	83.154	ENSSPUG00000007893	CNOT6	100	83.154	Sphenodon_punctatus
ENSELUG00000024580	cnot6a	100	87.835	ENSSPAG00000000149	cnot6b	100	87.835	Stegastes_partitus
ENSELUG00000024580	cnot6a	100	82.079	ENSSSCG00000014009	CNOT6	100	82.079	Sus_scrofa
ENSELUG00000024580	cnot6a	100	83.513	ENSTGUG00000001119	CNOT6	100	83.513	Taeniopygia_guttata
ENSELUG00000024580	cnot6a	100	85.125	ENSTRUG00000002818	cnot6b	100	85.125	Takifugu_rubripes
ENSELUG00000024580	cnot6a	100	85.663	ENSTNIG00000004443	cnot6b	99	85.663	Tetraodon_nigroviridis
ENSELUG00000024580	cnot6a	66	85.938	ENSTBEG00000017094	-	75	85.938	Tupaia_belangeri
ENSELUG00000024580	cnot6a	100	82.079	ENSTTRG00000009363	CNOT6	100	82.079	Tursiops_truncatus
ENSELUG00000024580	cnot6a	77	79.535	ENSUAMG00000004579	CNOT6	88	79.535	Ursus_americanus
ENSELUG00000024580	cnot6a	100	78.291	ENSUMAG00000024577	CNOT6	100	78.291	Ursus_maritimus
ENSELUG00000024580	cnot6a	83	89.189	ENSVPAG00000003593	CNOT6	83	89.189	Vicugna_pacos
ENSELUG00000024580	cnot6a	100	82.258	ENSVVUG00000026940	CNOT6	100	82.258	Vulpes_vulpes
ENSELUG00000024580	cnot6a	100	84.229	ENSXCOG00000003360	cnot6b	100	84.229	Xiphophorus_couchianus
ENSELUG00000024580	cnot6a	100	86.762	ENSXMAG00000008730	cnot6b	100	86.762	Xiphophorus_maculatus