EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000024603 (Gene tree)
Gene ID: 105014721
Gene Symbol: mrps18c
Alias: si:ch211-85e10.6
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 7428 bases
Position: chrLG14:7858668-7866095
Accession: 105014721
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000025918	Ribosomal_S18	PF01084.20	1.4e-22	1	1
ENSELUP00000025932	Ribosomal_S18	PF01084.20	1.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000037736	-	408	-	ENSELUP00000025932	135 (aa)	-	-
ENSELUT00000043796	-	3846	XM_010877266	ENSELUP00000025918	133 (aa)	XP_010875568	UPI000576A44A

Gene Model

Click here to download ENSELUG00000024603's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000024603's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000024603	mrps18c	78	73.077	ENSAPOG00000019045	mrps18c	81	73.077	Acanthochromis_polyacanthus
ENSELUG00000024603	mrps18c	67	76.404	ENSACIG00000020253	mrps18c	88	76.404	Amphilophus_citrinellus
ENSELUG00000024603	mrps18c	100	57.895	ENSAOCG00000014338	mrps18c	100	57.895	Amphiprion_ocellaris
ENSELUG00000024603	mrps18c	65	74.713	ENSAPEG00000023068	-	83	73.864	Amphiprion_percula
ENSELUG00000024603	mrps18c	100	57.895	ENSAPEG00000022956	mrps18c	100	57.895	Amphiprion_percula
ENSELUG00000024603	mrps18c	98	64.885	ENSATEG00000023417	mrps18c	98	64.885	Anabas_testudineus
ENSELUG00000024603	mrps18c	68	62.222	ENSAPLG00000012544	-	87	62.222	Anas_platyrhynchos
ENSELUG00000024603	mrps18c	68	75.824	ENSACLG00000010521	mrps18c	93	73.684	Astatotilapia_calliptera
ENSELUG00000024603	mrps18c	69	79.348	ENSAMXG00000012238	mrps18c	93	79.348	Astyanax_mexicanus
ENSELUG00000024603	mrps18c	81	62.963	ENSCPBG00000007783	-	66	62.963	Chrysemys_picta_bellii
ENSELUG00000024603	mrps18c	86	57.759	ENSCSEG00000000711	mrps18c	91	51.515	Cynoglossus_semilaevis
ENSELUG00000024603	mrps18c	81	65.741	ENSCVAG00000020169	mrps18c	83	65.741	Cyprinodon_variegatus
ENSELUG00000024603	mrps18c	100	54.412	ENSDARG00000069624	mrps18c	100	54.412	Danio_rerio
ENSELUG00000024603	mrps18c	81	66.667	ENSFHEG00000018752	-	83	66.667	Fundulus_heteroclitus
ENSELUG00000024603	mrps18c	81	66.667	ENSFHEG00000015550	mrps18c	79	66.667	Fundulus_heteroclitus
ENSELUG00000024603	mrps18c	69	66.304	ENSGALG00000023191	MRPS18C	64	66.304	Gallus_gallus
ENSELUG00000024603	mrps18c	81	67.593	ENSGAFG00000008048	mrps18c	68	67.593	Gambusia_affinis
ENSELUG00000024603	mrps18c	81	62.963	ENSGAGG00000015144	-	76	62.963	Gopherus_agassizii
ENSELUG00000024603	mrps18c	100	57.143	ENSHBUG00000002008	mrps18c	100	57.143	Haplochromis_burtoni
ENSELUG00000024603	mrps18c	100	59.259	ENSHCOG00000013161	mrps18c	100	59.259	Hippocampus_comes
ENSELUG00000024603	mrps18c	69	80.435	ENSIPUG00000003783	mrps18c	89	80.435	Ictalurus_punctatus
ENSELUG00000024603	mrps18c	83	70.000	ENSKMAG00000016467	mrps18c	84	70.000	Kryptolebias_marmoratus
ENSELUG00000024603	mrps18c	100	65.414	ENSLBEG00000021861	mrps18c	100	65.414	Labrus_bergylta
ENSELUG00000024603	mrps18c	100	65.414	ENSLBEG00000019174	mrps18c	100	65.414	Labrus_bergylta
ENSELUG00000024603	mrps18c	80	66.355	ENSLACG00000011243	mrps18c	84	66.355	Latimeria_chalumnae
ENSELUG00000024603	mrps18c	100	61.594	ENSLOCG00000012115	mrps18c	100	61.594	Lepisosteus_oculatus
ENSELUG00000024603	mrps18c	100	57.778	ENSMAMG00000012386	mrps18c	100	57.778	Mastacembelus_armatus
ENSELUG00000024603	mrps18c	100	57.143	ENSMZEG00005023278	mrps18c	100	57.143	Maylandia_zebra
ENSELUG00000024603	mrps18c	68	75.824	ENSMMOG00000011316	mrps18c	69	75.824	Mola_mola
ENSELUG00000024603	mrps18c	100	57.143	ENSNBRG00000006182	mrps18c	100	57.143	Neolamprologus_brichardi
ENSELUG00000024603	mrps18c	68	66.667	ENSMEUG00000010972	-	71	66.667	Notamacropus_eugenii
ENSELUG00000024603	mrps18c	100	58.647	ENSONIG00000012527	mrps18c	100	74.257	Oreochromis_niloticus
ENSELUG00000024603	mrps18c	100	59.398	ENSORLG00015006869	mrps18c	100	59.398	Oryzias_latipes_hsok
ENSELUG00000024603	mrps18c	86	61.739	ENSOMEG00000005009	mrps18c	100	61.739	Oryzias_melastigma
ENSELUG00000024603	mrps18c	100	61.314	ENSPKIG00000021736	mrps18c	100	61.314	Paramormyrops_kingsleyae
ENSELUG00000024603	mrps18c	71	72.917	ENSPMGG00000002991	mrps18c	97	72.917	Periophthalmus_magnuspinnatus
ENSELUG00000024603	mrps18c	81	68.519	ENSPFOG00000002351	mrps18c	68	68.519	Poecilia_formosa
ENSELUG00000024603	mrps18c	81	68.519	ENSPLAG00000015187	mrps18c	83	68.519	Poecilia_latipinna
ENSELUG00000024603	mrps18c	81	68.519	ENSPMEG00000014488	mrps18c	68	68.519	Poecilia_mexicana
ENSELUG00000024603	mrps18c	62	74.699	ENSPREG00000012593	mrps18c	85	74.699	Poecilia_reticulata
ENSELUG00000024603	mrps18c	100	56.391	ENSPNYG00000010654	mrps18c	100	56.391	Pundamilia_nyererei
ENSELUG00000024603	mrps18c	70	75.532	ENSPNAG00000009350	mrps18c	88	74.468	Pygocentrus_nattereri
ENSELUG00000024603	mrps18c	100	62.500	ENSSFOG00015019444	mrps18c	100	62.500	Scleropages_formosus
ENSELUG00000024603	mrps18c	100	63.910	ENSSDUG00000015676	mrps18c	100	63.910	Seriola_dumerili
ENSELUG00000024603	mrps18c	82	64.706	ENSSLDG00000002034	mrps18c	91	64.706	Seriola_lalandi_dorsalis
ENSELUG00000024603	mrps18c	71	66.316	ENSSPUG00000013990	-	69	66.316	Sphenodon_punctatus
ENSELUG00000024603	mrps18c	81	66.667	ENSSPAG00000008687	mrps18c	85	66.364	Stegastes_partitus
ENSELUG00000024603	mrps18c	82	64.220	ENSTRUG00000024403	mrps18c	84	64.220	Takifugu_rubripes
ENSELUG00000024603	mrps18c	100	57.895	ENSTNIG00000005674	mrps18c	100	57.895	Tetraodon_nigroviridis
ENSELUG00000024603	mrps18c	70	69.892	ENSXETG00000027597	mrps18c	71	69.892	Xenopus_tropicalis
ENSELUG00000024603	mrps18c	67	71.910	ENSXCOG00000016208	mrps18c	89	71.910	Xiphophorus_couchianus
ENSELUG00000024603	mrps18c	100	57.143	ENSXMAG00000012555	mrps18c	83	57.143	Xiphophorus_maculatus