EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000024604 (Gene tree)
Gene ID: 105022316
Gene Symbol: pan2
Alias: fc27e10|si:dkey-126g1.10|wu:fc27e10
Full Name: poly(A) specific ribonuclease subunit PAN2
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 13046 bases
Position: chrLG12:11275642-11288687
Accession: 105022316
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000042901	RNase_T	PF00929.24	4.5e-19	1	1
ENSELUP00000042922	RNase_T	PF00929.24	4.5e-19	1	1
ENSELUP00000025710	RNase_T	PF00929.24	4.9e-19	1	1
ENSELUP00000025731	RNase_T	PF00929.24	4.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000037485	-	4349	XM_010890585	ENSELUP00000025731	1208 (aa)	XP_010888887	UPI000576D0D9
ENSELUT00000037453	-	4202	XM_010890586	ENSELUP00000025710	1208 (aa)	XP_010888888	UPI0005777C38
ENSELUT00000037385	-	3603	-	ENSELUP00000042901	1200 (aa)	-	-
ENSELUT00000037436	-	4043	-	ENSELUP00000042922	1155 (aa)	-	-

Gene Model

Click here to download ENSELUG00000024604's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000024604's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000024604	pan2	99	89.992	ENSAPOG00000022955	pan2	99	89.826	Acanthochromis_polyacanthus
ENSELUG00000024604	pan2	99	75.185	ENSAMEG00000003824	PAN2	99	74.856	Ailuropoda_melanoleuca
ENSELUG00000024604	pan2	99	68.434	ENSACIG00000012858	PAN2	99	68.434	Amphilophus_citrinellus
ENSELUG00000024604	pan2	99	86.307	ENSACIG00000013079	pan2	99	86.141	Amphilophus_citrinellus
ENSELUG00000024604	pan2	99	90.074	ENSAOCG00000022334	pan2	99	89.826	Amphiprion_ocellaris
ENSELUG00000024604	pan2	99	89.727	ENSAPEG00000022760	pan2	99	89.478	Amphiprion_percula
ENSELUG00000024604	pan2	99	90.492	ENSATEG00000024030	pan2	99	90.242	Anabas_testudineus
ENSELUG00000024604	pan2	94	76.429	ENSAPLG00000005195	PAN2	100	76.585	Anas_platyrhynchos
ENSELUG00000024604	pan2	99	76.033	ENSACAG00000007067	PAN2	99	76.179	Anolis_carolinensis
ENSELUG00000024604	pan2	99	74.691	ENSANAG00000036468	PAN2	99	80.159	Aotus_nancymaae
ENSELUG00000024604	pan2	99	89.064	ENSACLG00000023674	pan2	99	89.147	Astatotilapia_calliptera
ENSELUG00000024604	pan2	99	67.170	ENSACLG00000023821	pan2	99	68.074	Astatotilapia_calliptera
ENSELUG00000024604	pan2	99	86.573	ENSAMXG00000005418	pan2	98	86.860	Astyanax_mexicanus
ENSELUG00000024604	pan2	99	75.021	ENSBTAG00000004376	PAN2	99	74.773	Bos_taurus
ENSELUG00000024604	pan2	99	74.773	ENSCJAG00000011141	PAN2	99	74.526	Callithrix_jacchus
ENSELUG00000024604	pan2	99	74.938	ENSCAFG00000000119	PAN2	99	78.316	Canis_familiaris
ENSELUG00000024604	pan2	99	74.773	ENSCAFG00020024865	PAN2	99	73.736	Canis_lupus_dingo
ENSELUG00000024604	pan2	99	74.713	ENSCHIG00000026935	PAN2	99	74.466	Capra_hircus
ENSELUG00000024604	pan2	99	74.384	ENSTSYG00000006927	PAN2	99	79.894	Carlito_syrichta
ENSELUG00000024604	pan2	99	74.651	ENSCPOG00000014918	PAN2	99	74.447	Cavia_porcellus
ENSELUG00000024604	pan2	99	74.938	ENSCCAG00000036637	PAN2	99	79.894	Cebus_capucinus
ENSELUG00000024604	pan2	99	74.773	ENSCATG00000045076	PAN2	99	80.585	Cercocebus_atys
ENSELUG00000024604	pan2	99	74.918	ENSCLAG00000011700	PAN2	99	74.795	Chinchilla_lanigera
ENSELUG00000024604	pan2	99	74.691	ENSCSAG00000005173	PAN2	99	74.361	Chlorocebus_sabaeus
ENSELUG00000024604	pan2	99	76.758	ENSCPBG00000014029	PAN2	99	77.004	Chrysemys_picta_bellii
ENSELUG00000024604	pan2	91	46.376	ENSCSAVG00000003833	-	97	60.933	Ciona_savignyi
ENSELUG00000024604	pan2	99	73.147	ENSCANG00000017798	PAN2	99	72.900	Colobus_angolensis_palliatus
ENSELUG00000024604	pan2	99	74.856	ENSCGRG00001019707	Pan2	99	74.631	Cricetulus_griseus_chok1gshd
ENSELUG00000024604	pan2	99	74.120	ENSCGRG00000009996	Pan2	99	73.835	Cricetulus_griseus_crigri
ENSELUG00000024604	pan2	99	84.202	ENSCSEG00000021529	pan2	99	84.036	Cynoglossus_semilaevis
ENSELUG00000024604	pan2	99	88.917	ENSCVAG00000010197	pan2	99	88.583	Cyprinodon_variegatus
ENSELUG00000024604	pan2	99	87.014	ENSDARG00000074675	pan2	99	87.014	Danio_rerio
ENSELUG00000024604	pan2	99	75.062	ENSDNOG00000010940	PAN2	99	74.814	Dasypus_novemcinctus
ENSELUG00000024604	pan2	93	41.017	FBgn0033352	PAN2	95	41.304	Drosophila_melanogaster
ENSELUG00000024604	pan2	74	85.507	ENSETEG00000012041	PAN2	81	85.507	Echinops_telfairi
ENSELUG00000024604	pan2	98	57.193	ENSEBUG00000002773	pan2	99	57.193	Eptatretus_burgeri
ENSELUG00000024604	pan2	99	74.774	ENSEASG00005005235	PAN2	99	74.668	Equus_asinus_asinus
ENSELUG00000024604	pan2	99	75.103	ENSECAG00000019814	PAN2	99	74.773	Equus_caballus
ENSELUG00000024604	pan2	99	75.103	ENSFCAG00000012021	PAN2	99	74.773	Felis_catus
ENSELUG00000024604	pan2	99	76.756	ENSFALG00000000464	PAN2	98	76.569	Ficedula_albicollis
ENSELUG00000024604	pan2	99	74.548	ENSFDAG00000017104	PAN2	99	74.262	Fukomys_damarensis
ENSELUG00000024604	pan2	90	85.088	ENSFHEG00000000157	pan2	97	85.220	Fundulus_heteroclitus
ENSELUG00000024604	pan2	99	87.231	ENSGMOG00000007249	pan2	99	87.313	Gadus_morhua
ENSELUG00000024604	pan2	99	77.527	ENSGALG00000031512	PAN2	99	77.012	Gallus_gallus
ENSELUG00000024604	pan2	99	88.255	ENSGAFG00000000284	pan2	99	88.007	Gambusia_affinis
ENSELUG00000024604	pan2	99	88.099	ENSGACG00000010722	pan2	99	88.347	Gasterosteus_aculeatus
ENSELUG00000024604	pan2	99	76.344	ENSGAGG00000007868	PAN2	99	75.993	Gopherus_agassizii
ENSELUG00000024604	pan2	99	74.773	ENSGGOG00000009115	PAN2	99	80.585	Gorilla_gorilla
ENSELUG00000024604	pan2	99	89.082	ENSHBUG00000005234	pan2	99	89.165	Haplochromis_burtoni
ENSELUG00000024604	pan2	99	74.302	ENSHGLG00000005647	PAN2	99	74.016	Heterocephalus_glaber_female
ENSELUG00000024604	pan2	99	74.056	ENSHGLG00100014057	PAN2	99	73.770	Heterocephalus_glaber_male
ENSELUG00000024604	pan2	99	86.982	ENSHCOG00000007920	pan2	99	86.982	Hippocampus_comes
ENSELUG00000024604	pan2	99	87.303	ENSIPUG00000011065	PAN2	99	86.971	Ictalurus_punctatus
ENSELUG00000024604	pan2	94	75.309	ENSSTOG00000015974	PAN2	99	75.412	Ictidomys_tridecemlineatus
ENSELUG00000024604	pan2	99	74.793	ENSJJAG00000013044	Pan2	97	74.979	Jaculus_jaculus
ENSELUG00000024604	pan2	99	88.343	ENSKMAG00000006192	pan2	99	88.260	Kryptolebias_marmoratus
ENSELUG00000024604	pan2	99	83.987	ENSLBEG00000015763	pan2	98	89.415	Labrus_bergylta
ENSELUG00000024604	pan2	99	70.526	ENSLACG00000018694	PAN2	99	70.607	Latimeria_chalumnae
ENSELUG00000024604	pan2	99	87.366	ENSLOCG00000004333	pan2	99	87.366	Lepisosteus_oculatus
ENSELUG00000024604	pan2	99	72.989	ENSLAFG00000014873	PAN2	99	72.742	Loxodonta_africana
ENSELUG00000024604	pan2	99	74.608	ENSMFAG00000002293	PAN2	99	80.585	Macaca_fascicularis
ENSELUG00000024604	pan2	99	74.608	ENSMMUG00000013482	PAN2	99	77.387	Macaca_mulatta
ENSELUG00000024604	pan2	99	74.691	ENSMNEG00000033264	PAN2	99	80.319	Macaca_nemestrina
ENSELUG00000024604	pan2	99	74.773	ENSMLEG00000037388	PAN2	99	80.585	Mandrillus_leucophaeus
ENSELUG00000024604	pan2	99	89.983	ENSMAMG00000001624	pan2	99	89.818	Mastacembelus_armatus
ENSELUG00000024604	pan2	98	68.666	ENSMZEG00005026472	pan2	98	69.461	Maylandia_zebra
ENSELUG00000024604	pan2	99	88.898	ENSMZEG00005026462	pan2	100	88.362	Maylandia_zebra
ENSELUG00000024604	pan2	96	77.673	ENSMGAG00000001439	PAN2	99	77.397	Meleagris_gallopavo
ENSELUG00000024604	pan2	99	74.610	ENSMAUG00000012602	Pan2	99	74.323	Mesocricetus_auratus
ENSELUG00000024604	pan2	99	74.856	ENSMICG00000017661	PAN2	99	78.877	Microcebus_murinus
ENSELUG00000024604	pan2	99	74.053	ENSMOCG00000007191	Pan2	99	74.156	Microtus_ochrogaster
ENSELUG00000024604	pan2	99	88.676	ENSMMOG00000009313	pan2	97	88.843	Mola_mola
ENSELUG00000024604	pan2	99	89.469	ENSMALG00000013377	pan2	99	89.221	Monopterus_albus
ENSELUG00000024604	pan2	99	74.077	MGP_CAROLIEiJ_G0015930	Pan2	99	73.710	Mus_caroli
ENSELUG00000024604	pan2	99	74.628	ENSMUSG00000005682	Pan2	99	74.257	Mus_musculus
ENSELUG00000024604	pan2	99	74.241	MGP_PahariEiJ_G0031154	Pan2	99	73.956	Mus_pahari
ENSELUG00000024604	pan2	99	74.732	MGP_SPRETEiJ_G0016755	Pan2	99	74.361	Mus_spretus
ENSELUG00000024604	pan2	99	75.185	ENSMPUG00000001383	PAN2	99	74.856	Mustela_putorius_furo
ENSELUG00000024604	pan2	99	74.361	ENSMLUG00000006737	PAN2	99	74.444	Myotis_lucifugus
ENSELUG00000024604	pan2	99	74.856	ENSNGAG00000007930	Pan2	99	74.568	Nannospalax_galili
ENSELUG00000024604	pan2	92	94.393	ENSNBRG00000006585	pan2	99	94.393	Neolamprologus_brichardi
ENSELUG00000024604	pan2	99	70.583	ENSNLEG00000017499	PAN2	99	79.787	Nomascus_leucogenys
ENSELUG00000024604	pan2	99	76.320	ENSMEUG00000010125	PAN2	99	75.908	Notamacropus_eugenii
ENSELUG00000024604	pan2	99	74.196	ENSOPRG00000001468	PAN2	99	73.827	Ochotona_princeps
ENSELUG00000024604	pan2	99	74.141	ENSODEG00000007203	PAN2	99	73.938	Octodon_degus
ENSELUG00000024604	pan2	99	86.896	ENSONIG00000016732	pan2	99	87.182	Oreochromis_niloticus
ENSELUG00000024604	pan2	81	67.668	ENSOANG00000005151	PAN2	99	67.936	Ornithorhynchus_anatinus
ENSELUG00000024604	pan2	99	74.344	ENSOCUG00000007227	PAN2	99	74.426	Oryctolagus_cuniculus
ENSELUG00000024604	pan2	99	87.417	ENSORLG00000015195	pan2	99	87.417	Oryzias_latipes
ENSELUG00000024604	pan2	99	87.500	ENSORLG00020000277	pan2	99	87.500	Oryzias_latipes_hni
ENSELUG00000024604	pan2	99	87.252	ENSORLG00015005193	pan2	99	87.252	Oryzias_latipes_hsok
ENSELUG00000024604	pan2	99	87.997	ENSOMEG00000022087	pan2	99	87.914	Oryzias_melastigma
ENSELUG00000024604	pan2	99	74.141	ENSOGAG00000030620	PAN2	99	73.895	Otolemur_garnettii
ENSELUG00000024604	pan2	99	75.103	ENSOARG00000009379	PAN2	99	74.856	Ovis_aries
ENSELUG00000024604	pan2	99	74.691	ENSPPAG00000001208	PAN2	99	80.585	Pan_paniscus
ENSELUG00000024604	pan2	99	75.021	ENSPPRG00000021586	PAN2	99	74.691	Panthera_pardus
ENSELUG00000024604	pan2	99	71.288	ENSPTIG00000012494	PAN2	99	71.042	Panthera_tigris_altaica
ENSELUG00000024604	pan2	99	74.691	ENSPTRG00000052054	PAN2	99	80.585	Pan_troglodytes
ENSELUG00000024604	pan2	92	76.413	ENSPANG00000018906	PAN2	99	80.585	Papio_anubis
ENSELUG00000024604	pan2	99	86.070	ENSPKIG00000003973	pan2	99	85.904	Paramormyrops_kingsleyae
ENSELUG00000024604	pan2	99	73.350	ENSPSIG00000003267	PAN2	99	73.163	Pelodiscus_sinensis
ENSELUG00000024604	pan2	99	86.851	ENSPMGG00000023186	pan2	99	86.767	Periophthalmus_magnuspinnatus
ENSELUG00000024604	pan2	99	73.749	ENSPEMG00000018505	Pan2	99	73.671	Peromyscus_maniculatus_bairdii
ENSELUG00000024604	pan2	91	67.027	ENSPMAG00000004731	pan2	100	67.182	Petromyzon_marinus
ENSELUG00000024604	pan2	99	76.758	ENSPCIG00000024643	PAN2	99	76.427	Phascolarctos_cinereus
ENSELUG00000024604	pan2	99	88.255	ENSPFOG00000008392	pan2	99	88.007	Poecilia_formosa
ENSELUG00000024604	pan2	99	88.172	ENSPLAG00000009198	pan2	99	87.924	Poecilia_latipinna
ENSELUG00000024604	pan2	99	88.337	ENSPMEG00000001484	pan2	99	88.089	Poecilia_mexicana
ENSELUG00000024604	pan2	99	88.667	ENSPREG00000000900	pan2	99	88.583	Poecilia_reticulata
ENSELUG00000024604	pan2	89	76.755	ENSPPYG00000004656	PAN2	99	77.073	Pongo_abelii
ENSELUG00000024604	pan2	92	76.502	ENSPCAG00000011047	PAN2	99	76.332	Procavia_capensis
ENSELUG00000024604	pan2	99	74.526	ENSPCOG00000018263	PAN2	99	74.608	Propithecus_coquereli
ENSELUG00000024604	pan2	94	73.625	ENSPVAG00000007591	PAN2	94	73.422	Pteropus_vampyrus
ENSELUG00000024604	pan2	99	89.147	ENSPNYG00000002629	pan2	99	89.229	Pundamilia_nyererei
ENSELUG00000024604	pan2	99	88.806	ENSPNAG00000027140	pan2	99	88.557	Pygocentrus_nattereri
ENSELUG00000024604	pan2	99	74.711	ENSRNOG00000032441	Pan2	99	74.422	Rattus_norvegicus
ENSELUG00000024604	pan2	99	74.526	ENSRBIG00000029591	PAN2	99	80.053	Rhinopithecus_bieti
ENSELUG00000024604	pan2	99	74.649	ENSRROG00000041950	PAN2	99	80.429	Rhinopithecus_roxellana
ENSELUG00000024604	pan2	99	74.773	ENSSBOG00000027343	PAN2	99	79.894	Saimiri_boliviensis_boliviensis
ENSELUG00000024604	pan2	92	76.738	ENSSHAG00000000122	PAN2	99	78.051	Sarcophilus_harrisii
ENSELUG00000024604	pan2	99	86.982	ENSSFOG00015017740	pan2	99	86.733	Scleropages_formosus
ENSELUG00000024604	pan2	99	88.328	ENSSMAG00000020901	pan2	99	88.411	Scophthalmus_maximus
ENSELUG00000024604	pan2	99	90.555	ENSSDUG00000001840	pan2	99	90.389	Seriola_dumerili
ENSELUG00000024604	pan2	99	90.902	ENSSLDG00000013866	pan2	99	90.736	Seriola_lalandi_dorsalis
ENSELUG00000024604	pan2	92	76.550	ENSSARG00000013350	PAN2	92	76.099	Sorex_araneus
ENSELUG00000024604	pan2	92	78.237	ENSSPUG00000004270	PAN2	99	78.111	Sphenodon_punctatus
ENSELUG00000024604	pan2	99	89.892	ENSSPAG00000019970	pan2	99	89.727	Stegastes_partitus
ENSELUG00000024604	pan2	99	74.526	ENSSSCG00000000393	PAN2	99	74.453	Sus_scrofa
ENSELUG00000024604	pan2	99	87.407	ENSTRUG00000014260	pan2	99	87.241	Takifugu_rubripes
ENSELUG00000024604	pan2	99	87.552	ENSTNIG00000012537	pan2	99	87.386	Tetraodon_nigroviridis
ENSELUG00000024604	pan2	84	75.000	ENSTTRG00000007150	PAN2	80	75.302	Tursiops_truncatus
ENSELUG00000024604	pan2	99	75.041	ENSUAMG00000026522	PAN2	99	74.712	Ursus_americanus
ENSELUG00000024604	pan2	99	74.468	ENSUMAG00000017020	PAN2	99	74.223	Ursus_maritimus
ENSELUG00000024604	pan2	79	91.626	ENSVPAG00000007309	PAN2	85	91.626	Vicugna_pacos
ENSELUG00000024604	pan2	99	75.185	ENSVVUG00000021878	PAN2	99	74.856	Vulpes_vulpes
ENSELUG00000024604	pan2	99	73.710	ENSXETG00000009434	pan2	100	75.167	Xenopus_tropicalis
ENSELUG00000024604	pan2	99	83.221	ENSXCOG00000014391	pan2	99	83.221	Xiphophorus_couchianus
ENSELUG00000024604	pan2	99	88.420	ENSXMAG00000011661	pan2	99	88.089	Xiphophorus_maculatus