EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000000375 (Gene tree)
Gene ID: -
Gene Symbol: SND1
Alias: TDRD11|p100
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 439808 bases
Position: chrGeneScaffold_8280:4531-444338
Accession: 30646
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000000292	TUDOR	PF00567.24	7.1e-28	1	1
ENSETEP00000000292	SNase	PF00565.17	1.6e-34	1	2
ENSETEP00000000292	SNase	PF00565.17	1.6e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000000376	SND1-201	2649	-	ENSETEP00000000292	882 (aa)	-	UPI0000E4119F

Gene Model

Click here to download ENSETEG00000000375's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000000375's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000000375	SND1	92	100.000	ENSG00000197157	SND1	90	100.000	Homo_sapiens
ENSETEG00000000375	SND1	92	91.667	ENSAPOG00000017599	snd1	90	91.667	Acanthochromis_polyacanthus
ENSETEG00000000375	SND1	92	100.000	ENSAMEG00000004664	SND1	85	100.000	Ailuropoda_melanoleuca
ENSETEG00000000375	SND1	92	91.667	ENSACIG00000003551	snd1	90	91.667	Amphilophus_citrinellus
ENSETEG00000000375	SND1	92	91.667	ENSAOCG00000014166	snd1	90	91.667	Amphiprion_ocellaris
ENSETEG00000000375	SND1	92	91.667	ENSAPEG00000007067	snd1	90	91.667	Amphiprion_percula
ENSETEG00000000375	SND1	88	66.880	ENSATEG00000018475	snd1	78	66.880	Anabas_testudineus
ENSETEG00000000375	SND1	92	100.000	ENSANAG00000034463	SND1	92	100.000	Aotus_nancymaae
ENSETEG00000000375	SND1	92	91.667	ENSACLG00000022897	snd1	90	91.667	Astatotilapia_calliptera
ENSETEG00000000375	SND1	92	88.889	ENSAMXG00000016318	snd1	90	90.476	Astyanax_mexicanus
ENSETEG00000000375	SND1	92	100.000	ENSBTAG00000010692	SND1	90	100.000	Bos_taurus
ENSETEG00000000375	SND1	88	39.326	WBGene00006626	tsn-1	86	39.326	Caenorhabditis_elegans
ENSETEG00000000375	SND1	92	100.000	ENSCJAG00000017668	SND1	91	100.000	Callithrix_jacchus
ENSETEG00000000375	SND1	92	100.000	ENSCAFG00000001700	SND1	90	100.000	Canis_familiaris
ENSETEG00000000375	SND1	92	100.000	ENSCAFG00020021639	SND1	90	100.000	Canis_lupus_dingo
ENSETEG00000000375	SND1	92	100.000	ENSCHIG00000023390	SND1	91	100.000	Capra_hircus
ENSETEG00000000375	SND1	72	71.127	ENSTSYG00000004979	SND1	96	71.127	Carlito_syrichta
ENSETEG00000000375	SND1	92	100.000	ENSCAPG00000010677	SND1	89	100.000	Cavia_aperea
ENSETEG00000000375	SND1	92	100.000	ENSCPOG00000006251	SND1	90	100.000	Cavia_porcellus
ENSETEG00000000375	SND1	92	100.000	ENSCCAG00000036847	SND1	92	100.000	Cebus_capucinus
ENSETEG00000000375	SND1	92	100.000	ENSCATG00000035214	SND1	92	100.000	Cercocebus_atys
ENSETEG00000000375	SND1	92	100.000	ENSCLAG00000011796	SND1	90	100.000	Chinchilla_lanigera
ENSETEG00000000375	SND1	92	100.000	ENSCSAG00000010182	SND1	90	100.000	Chlorocebus_sabaeus
ENSETEG00000000375	SND1	68	89.764	ENSCHOG00000002218	SND1	75	89.764	Choloepus_hoffmanni
ENSETEG00000000375	SND1	92	91.667	ENSCPBG00000018094	SND1	90	91.667	Chrysemys_picta_bellii
ENSETEG00000000375	SND1	92	55.556	ENSCING00000000524	-	90	55.556	Ciona_intestinalis
ENSETEG00000000375	SND1	92	55.556	ENSCSAVG00000008807	-	89	55.556	Ciona_savignyi
ENSETEG00000000375	SND1	92	100.000	ENSCANG00000035119	SND1	90	100.000	Colobus_angolensis_palliatus
ENSETEG00000000375	SND1	92	100.000	ENSCGRG00001022514	Snd1	90	100.000	Cricetulus_griseus_chok1gshd
ENSETEG00000000375	SND1	92	100.000	ENSCGRG00000012277	Snd1	92	100.000	Cricetulus_griseus_crigri
ENSETEG00000000375	SND1	92	88.889	ENSCSEG00000008661	snd1	92	88.889	Cynoglossus_semilaevis
ENSETEG00000000375	SND1	92	88.889	ENSCVAG00000010316	snd1	90	88.889	Cyprinodon_variegatus
ENSETEG00000000375	SND1	92	88.889	ENSDARG00000006766	snd1	90	88.889	Danio_rerio
ENSETEG00000000375	SND1	92	100.000	ENSDNOG00000006795	SND1	92	100.000	Dasypus_novemcinctus
ENSETEG00000000375	SND1	92	100.000	ENSDORG00000000336	Snd1	90	100.000	Dipodomys_ordii
ENSETEG00000000375	SND1	88	40.887	FBgn0035121	Tudor-SN	86	41.140	Drosophila_melanogaster
ENSETEG00000000375	SND1	92	100.000	ENSEASG00005008513	SND1	90	100.000	Equus_asinus_asinus
ENSETEG00000000375	SND1	92	100.000	ENSECAG00000011451	SND1	90	100.000	Equus_caballus
ENSETEG00000000375	SND1	88	68.462	ENSEEUG00000014737	SND1	86	68.462	Erinaceus_europaeus
ENSETEG00000000375	SND1	92	85.294	ENSELUG00000001805	snd1	86	85.294	Esox_lucius
ENSETEG00000000375	SND1	92	100.000	ENSFCAG00000008289	SND1	90	100.000	Felis_catus
ENSETEG00000000375	SND1	92	100.000	ENSFDAG00000015881	SND1	90	100.000	Fukomys_damarensis
ENSETEG00000000375	SND1	92	88.889	ENSFHEG00000004093	snd1	90	88.889	Fundulus_heteroclitus
ENSETEG00000000375	SND1	55	83.333	ENSGMOG00000018932	snd1	55	83.333	Gadus_morhua
ENSETEG00000000375	SND1	92	88.889	ENSGAFG00000008421	snd1	92	88.889	Gambusia_affinis
ENSETEG00000000375	SND1	65	88.889	ENSGACG00000019793	snd1	65	88.889	Gasterosteus_aculeatus
ENSETEG00000000375	SND1	92	100.000	ENSGGOG00000009614	SND1	91	100.000	Gorilla_gorilla
ENSETEG00000000375	SND1	92	91.667	ENSHBUG00000019135	snd1	90	91.667	Haplochromis_burtoni
ENSETEG00000000375	SND1	92	100.000	ENSHGLG00000003618	SND1	90	100.000	Heterocephalus_glaber_female
ENSETEG00000000375	SND1	92	100.000	ENSHGLG00100012449	SND1	90	100.000	Heterocephalus_glaber_male
ENSETEG00000000375	SND1	92	86.111	ENSHCOG00000005266	snd1	90	86.111	Hippocampus_comes
ENSETEG00000000375	SND1	92	88.889	ENSIPUG00000013279	snd1	90	88.889	Ictalurus_punctatus
ENSETEG00000000375	SND1	92	100.000	ENSSTOG00000002140	SND1	90	100.000	Ictidomys_tridecemlineatus
ENSETEG00000000375	SND1	92	100.000	ENSJJAG00000009561	Snd1	90	100.000	Jaculus_jaculus
ENSETEG00000000375	SND1	92	91.667	ENSKMAG00000016997	snd1	90	91.667	Kryptolebias_marmoratus
ENSETEG00000000375	SND1	91	90.476	ENSLBEG00000013563	snd1	90	90.476	Labrus_bergylta
ENSETEG00000000375	SND1	92	94.444	ENSLOCG00000015537	snd1	90	94.444	Lepisosteus_oculatus
ENSETEG00000000375	SND1	92	100.000	ENSLAFG00000009696	SND1	90	100.000	Loxodonta_africana
ENSETEG00000000375	SND1	92	100.000	ENSMFAG00000038114	SND1	92	100.000	Macaca_fascicularis
ENSETEG00000000375	SND1	92	100.000	ENSMMUG00000015432	SND1	90	100.000	Macaca_mulatta
ENSETEG00000000375	SND1	92	100.000	ENSMNEG00000039808	SND1	92	100.000	Macaca_nemestrina
ENSETEG00000000375	SND1	92	100.000	ENSMLEG00000029040	SND1	92	100.000	Mandrillus_leucophaeus
ENSETEG00000000375	SND1	92	91.667	ENSMAMG00000011739	snd1	90	91.667	Mastacembelus_armatus
ENSETEG00000000375	SND1	91	95.238	ENSMZEG00005005681	snd1	90	95.238	Maylandia_zebra
ENSETEG00000000375	SND1	92	100.000	ENSMICG00000000097	SND1	91	100.000	Microcebus_murinus
ENSETEG00000000375	SND1	92	100.000	ENSMOCG00000005040	Snd1	90	100.000	Microtus_ochrogaster
ENSETEG00000000375	SND1	92	88.889	ENSMMOG00000001795	snd1	90	88.889	Mola_mola
ENSETEG00000000375	SND1	92	100.000	ENSMODG00000015182	SND1	90	100.000	Monodelphis_domestica
ENSETEG00000000375	SND1	92	91.667	ENSMALG00000012071	snd1	90	91.667	Monopterus_albus
ENSETEG00000000375	SND1	92	100.000	MGP_CAROLIEiJ_G0028159	Snd1	90	100.000	Mus_caroli
ENSETEG00000000375	SND1	92	100.000	ENSMUSG00000001424	Snd1	90	100.000	Mus_musculus
ENSETEG00000000375	SND1	92	100.000	MGP_PahariEiJ_G0021917	Snd1	90	100.000	Mus_pahari
ENSETEG00000000375	SND1	92	100.000	MGP_SPRETEiJ_G0029159	Snd1	90	100.000	Mus_spretus
ENSETEG00000000375	SND1	92	100.000	ENSMPUG00000006545	SND1	90	100.000	Mustela_putorius_furo
ENSETEG00000000375	SND1	92	100.000	ENSMLUG00000017130	SND1	92	100.000	Myotis_lucifugus
ENSETEG00000000375	SND1	92	100.000	ENSNGAG00000011186	Snd1	90	100.000	Nannospalax_galili
ENSETEG00000000375	SND1	92	91.667	ENSNBRG00000006681	snd1	90	91.667	Neolamprologus_brichardi
ENSETEG00000000375	SND1	92	100.000	ENSNLEG00000012263	SND1	92	100.000	Nomascus_leucogenys
ENSETEG00000000375	SND1	92	100.000	ENSOPRG00000013405	SND1	90	100.000	Ochotona_princeps
ENSETEG00000000375	SND1	92	100.000	ENSODEG00000011502	SND1	90	100.000	Octodon_degus
ENSETEG00000000375	SND1	92	91.667	ENSONIG00000011481	snd1	87	91.667	Oreochromis_niloticus
ENSETEG00000000375	SND1	92	100.000	ENSOANG00000000817	SND1	90	100.000	Ornithorhynchus_anatinus
ENSETEG00000000375	SND1	92	100.000	ENSOCUG00000001620	SND1	90	100.000	Oryctolagus_cuniculus
ENSETEG00000000375	SND1	92	88.889	ENSORLG00000015201	snd1	90	88.889	Oryzias_latipes
ENSETEG00000000375	SND1	92	88.889	ENSORLG00020013991	snd1	90	88.889	Oryzias_latipes_hni
ENSETEG00000000375	SND1	92	88.889	ENSORLG00015012436	snd1	90	88.889	Oryzias_latipes_hsok
ENSETEG00000000375	SND1	92	88.889	ENSOMEG00000006406	snd1	90	88.889	Oryzias_melastigma
ENSETEG00000000375	SND1	92	100.000	ENSOGAG00000013356	SND1	85	100.000	Otolemur_garnettii
ENSETEG00000000375	SND1	92	100.000	ENSOARG00000002149	SND1	92	100.000	Ovis_aries
ENSETEG00000000375	SND1	92	100.000	ENSPPAG00000042947	SND1	91	100.000	Pan_paniscus
ENSETEG00000000375	SND1	92	100.000	ENSPPRG00000004494	SND1	90	100.000	Panthera_pardus
ENSETEG00000000375	SND1	92	100.000	ENSPTIG00000014214	SND1	90	100.000	Panthera_tigris_altaica
ENSETEG00000000375	SND1	92	100.000	ENSPTRG00000023911	SND1	91	100.000	Pan_troglodytes
ENSETEG00000000375	SND1	92	100.000	ENSPANG00000011997	SND1	92	100.000	Papio_anubis
ENSETEG00000000375	SND1	92	86.111	ENSPKIG00000023494	snd1	90	86.111	Paramormyrops_kingsleyae
ENSETEG00000000375	SND1	86	66.144	ENSPMGG00000003629	snd1	92	66.144	Periophthalmus_magnuspinnatus
ENSETEG00000000375	SND1	92	100.000	ENSPEMG00000010240	Snd1	90	100.000	Peromyscus_maniculatus_bairdii
ENSETEG00000000375	SND1	88	60.714	ENSPMAG00000007915	-	88	60.714	Petromyzon_marinus
ENSETEG00000000375	SND1	92	100.000	ENSPCIG00000011561	SND1	90	100.000	Phascolarctos_cinereus
ENSETEG00000000375	SND1	92	88.889	ENSPFOG00000001557	snd1	90	88.889	Poecilia_formosa
ENSETEG00000000375	SND1	92	88.889	ENSPLAG00000018459	snd1	87	88.889	Poecilia_latipinna
ENSETEG00000000375	SND1	92	88.889	ENSPMEG00000006803	snd1	90	88.889	Poecilia_mexicana
ENSETEG00000000375	SND1	92	88.889	ENSPREG00000002189	snd1	90	88.889	Poecilia_reticulata
ENSETEG00000000375	SND1	92	100.000	ENSPPYG00000017972	SND1	97	100.000	Pongo_abelii
ENSETEG00000000375	SND1	92	100.000	ENSPCAG00000011305	SND1	90	100.000	Procavia_capensis
ENSETEG00000000375	SND1	92	100.000	ENSPCOG00000026791	SND1	92	100.000	Propithecus_coquereli
ENSETEG00000000375	SND1	92	100.000	ENSPVAG00000013945	SND1	90	100.000	Pteropus_vampyrus
ENSETEG00000000375	SND1	92	91.667	ENSPNYG00000000932	snd1	90	91.667	Pundamilia_nyererei
ENSETEG00000000375	SND1	92	88.889	ENSPNAG00000001206	snd1	90	88.889	Pygocentrus_nattereri
ENSETEG00000000375	SND1	92	100.000	ENSRNOG00000031173	Snd1	92	100.000	Rattus_norvegicus
ENSETEG00000000375	SND1	72	69.680	ENSRBIG00000027782	-	93	69.772	Rhinopithecus_bieti
ENSETEG00000000375	SND1	92	100.000	ENSRROG00000033020	SND1	90	100.000	Rhinopithecus_roxellana
ENSETEG00000000375	SND1	92	100.000	ENSSBOG00000032461	SND1	92	100.000	Saimiri_boliviensis_boliviensis
ENSETEG00000000375	SND1	92	100.000	ENSSHAG00000015359	SND1	92	100.000	Sarcophilus_harrisii
ENSETEG00000000375	SND1	92	80.556	ENSSFOG00015001103	snd1	90	80.556	Scleropages_formosus
ENSETEG00000000375	SND1	92	88.889	ENSSMAG00000001932	snd1	85	88.889	Scophthalmus_maximus
ENSETEG00000000375	SND1	92	91.667	ENSSDUG00000002699	snd1	84	91.667	Seriola_dumerili
ENSETEG00000000375	SND1	92	91.667	ENSSLDG00000001950	snd1	89	91.667	Seriola_lalandi_dorsalis
ENSETEG00000000375	SND1	81	92.105	ENSSARG00000004877	SND1	84	92.105	Sorex_araneus
ENSETEG00000000375	SND1	72	61.391	ENSSPUG00000017586	SND1	96	61.391	Sphenodon_punctatus
ENSETEG00000000375	SND1	72	61.593	ENSSPAG00000021398	snd1	94	61.593	Stegastes_partitus
ENSETEG00000000375	SND1	92	100.000	ENSSSCG00000016590	SND1	90	100.000	Sus_scrofa
ENSETEG00000000375	SND1	92	86.111	ENSTRUG00000014067	snd1	90	86.111	Takifugu_rubripes
ENSETEG00000000375	SND1	92	86.111	ENSTNIG00000011019	snd1	90	86.111	Tetraodon_nigroviridis
ENSETEG00000000375	SND1	88	70.769	ENSTBEG00000003999	SND1	92	70.769	Tupaia_belangeri
ENSETEG00000000375	SND1	92	100.000	ENSTTRG00000006059	SND1	90	100.000	Tursiops_truncatus
ENSETEG00000000375	SND1	51	72.327	ENSUAMG00000002820	-	74	72.327	Ursus_americanus
ENSETEG00000000375	SND1	70	100.000	ENSUAMG00000005604	-	81	100.000	Ursus_americanus
ENSETEG00000000375	SND1	92	100.000	ENSUMAG00000005960	SND1	90	100.000	Ursus_maritimus
ENSETEG00000000375	SND1	64	100.000	ENSVPAG00000008302	SND1	60	100.000	Vicugna_pacos
ENSETEG00000000375	SND1	92	100.000	ENSVVUG00000007226	SND1	90	100.000	Vulpes_vulpes
ENSETEG00000000375	SND1	88	67.263	ENSXETG00000023043	snd1	88	67.318	Xenopus_tropicalis
ENSETEG00000000375	SND1	86	64.706	ENSXCOG00000013629	snd1	90	64.706	Xiphophorus_couchianus
ENSETEG00000000375	SND1	92	88.889	ENSXMAG00000011469	snd1	90	88.889	Xiphophorus_maculatus