EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000000412 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 163764 bases
Position: chrGeneScaffold_583:764-164527
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000000329	RNA_pol_Rpb1_5	PF04998.17	1.6e-24	1	2
ENSETEP00000000329	RNA_pol_Rpb1_5	PF04998.17	1.6e-24	2	2
ENSETEP00000000329	RNA_pol_Rpb1_2	PF00623.20	6.6e-28	1	1
ENSETEP00000000329	RNA_pol_Rpb1_3	PF04983.18	4.6e-32	1	1
ENSETEP00000000329	RNA_pol_Rpb1_1	PF04997.12	5.3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000000417	-	5103	-	ENSETEP00000000329	1701 (aa)	-	UPI0000E43FB9

Gene Model

Click here to download ENSETEG00000000412's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000000412's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000000412	-	72	96.875	ENSG00000068654	POLR1A	72	96.875	Homo_sapiens
ENSETEG00000000412	-	53	64.299	ENSAPOG00000017945	polr1a	75	64.299	Acanthochromis_polyacanthus
ENSETEG00000000412	-	72	96.875	ENSAMEG00000005807	POLR1A	88	88.073	Ailuropoda_melanoleuca
ENSETEG00000000412	-	68	87.500	ENSACIG00000022147	polr1a	70	87.500	Amphilophus_citrinellus
ENSETEG00000000412	-	71	90.625	ENSAOCG00000017336	polr1a	72	90.625	Amphiprion_ocellaris
ENSETEG00000000412	-	71	90.625	ENSAPEG00000016105	polr1a	72	90.625	Amphiprion_percula
ENSETEG00000000412	-	71	87.500	ENSATEG00000016773	polr1a	72	87.500	Anabas_testudineus
ENSETEG00000000412	-	57	87.097	ENSAPLG00000013871	POLR1A	67	87.097	Anas_platyrhynchos
ENSETEG00000000412	-	72	93.750	ENSACAG00000012141	POLR1A	72	93.750	Anolis_carolinensis
ENSETEG00000000412	-	72	100.000	ENSANAG00000033927	POLR1A	72	100.000	Aotus_nancymaae
ENSETEG00000000412	-	72	87.500	ENSACLG00000020541	polr1a	72	87.500	Astatotilapia_calliptera
ENSETEG00000000412	-	72	100.000	ENSBTAG00000006481	POLR1A	72	100.000	Bos_taurus
ENSETEG00000000412	-	68	36.388	WBGene00012999	rpoa-1	68	36.388	Caenorhabditis_elegans
ENSETEG00000000412	-	72	100.000	ENSCJAG00000019547	POLR1A	72	100.000	Callithrix_jacchus
ENSETEG00000000412	-	72	100.000	ENSCAFG00000007613	POLR1A	73	100.000	Canis_familiaris
ENSETEG00000000412	-	72	100.000	ENSCAFG00020014752	POLR1A	84	88.224	Canis_lupus_dingo
ENSETEG00000000412	-	72	100.000	ENSCHIG00000018204	POLR1A	72	100.000	Capra_hircus
ENSETEG00000000412	-	72	96.875	ENSTSYG00000002761	POLR1A	72	96.875	Carlito_syrichta
ENSETEG00000000412	-	69	93.750	ENSCAPG00000010132	POLR1A	70	93.750	Cavia_aperea
ENSETEG00000000412	-	72	93.750	ENSCPOG00000012350	POLR1A	72	93.750	Cavia_porcellus
ENSETEG00000000412	-	72	100.000	ENSCCAG00000019839	POLR1A	72	100.000	Cebus_capucinus
ENSETEG00000000412	-	72	100.000	ENSCATG00000029786	POLR1A	72	100.000	Cercocebus_atys
ENSETEG00000000412	-	72	93.750	ENSCLAG00000005187	POLR1A	72	93.750	Chinchilla_lanigera
ENSETEG00000000412	-	72	100.000	ENSCSAG00000016251	POLR1A	72	100.000	Chlorocebus_sabaeus
ENSETEG00000000412	-	71	93.548	ENSCPBG00000001115	POLR1A	72	93.548	Chrysemys_picta_bellii
ENSETEG00000000412	-	64	50.177	ENSCSAVG00000007184	-	71	44.687	Ciona_savignyi
ENSETEG00000000412	-	72	100.000	ENSCANG00000031785	POLR1A	72	100.000	Colobus_angolensis_palliatus
ENSETEG00000000412	-	68	96.875	ENSCGRG00001006651	Polr1a	71	96.875	Cricetulus_griseus_chok1gshd
ENSETEG00000000412	-	71	87.097	ENSCSEG00000020190	polr1a	72	87.097	Cynoglossus_semilaevis
ENSETEG00000000412	-	71	87.500	ENSCVAG00000020941	polr1a	72	87.500	Cyprinodon_variegatus
ENSETEG00000000412	-	71	81.250	ENSDARG00000098375	polr1a	71	81.250	Danio_rerio
ENSETEG00000000412	-	72	93.750	ENSDNOG00000010829	POLR1A	72	93.750	Dasypus_novemcinctus
ENSETEG00000000412	-	72	100.000	ENSDORG00000008298	Polr1a	72	100.000	Dipodomys_ordii
ENSETEG00000000412	-	60	43.784	FBgn0019938	RpI1	69	43.784	Drosophila_melanogaster
ENSETEG00000000412	-	59	46.875	ENSEBUG00000005667	-	71	46.875	Eptatretus_burgeri
ENSETEG00000000412	-	72	96.875	ENSEASG00005001625	POLR1A	72	96.875	Equus_asinus_asinus
ENSETEG00000000412	-	72	96.875	ENSECAG00000036306	-	69	100.000	Equus_caballus
ENSETEG00000000412	-	72	96.875	ENSECAG00000030510	-	75	96.875	Equus_caballus
ENSETEG00000000412	-	72	96.875	ENSECAG00000010092	POLR1A	72	96.875	Equus_caballus
ENSETEG00000000412	-	61	96.875	ENSEEUG00000000676	POLR1A	62	96.875	Erinaceus_europaeus
ENSETEG00000000412	-	71	81.250	ENSELUG00000012769	polr1a	70	81.250	Esox_lucius
ENSETEG00000000412	-	72	93.750	ENSFCAG00000008966	POLR1A	72	93.750	Felis_catus
ENSETEG00000000412	-	71	93.548	ENSFALG00000010082	POLR1A	72	93.548	Ficedula_albicollis
ENSETEG00000000412	-	72	96.875	ENSFDAG00000013726	POLR1A	72	96.875	Fukomys_damarensis
ENSETEG00000000412	-	72	87.500	ENSFHEG00000005996	polr1a	71	87.500	Fundulus_heteroclitus
ENSETEG00000000412	-	71	81.250	ENSGMOG00000002230	polr1a	71	81.250	Gadus_morhua
ENSETEG00000000412	-	70	69.590	ENSGALG00000038160	-	77	69.590	Gallus_gallus
ENSETEG00000000412	-	71	90.625	ENSGAFG00000015266	polr1a	72	90.625	Gambusia_affinis
ENSETEG00000000412	-	71	84.375	ENSGACG00000018791	polr1a	72	84.375	Gasterosteus_aculeatus
ENSETEG00000000412	-	61	90.323	ENSGAGG00000004984	-	68	90.323	Gopherus_agassizii
ENSETEG00000000412	-	72	100.000	ENSGGOG00000001788	POLR1A	72	100.000	Gorilla_gorilla
ENSETEG00000000412	-	55	87.500	ENSHBUG00000020021	polr1a	61	87.500	Haplochromis_burtoni
ENSETEG00000000412	-	72	96.875	ENSHGLG00000006334	POLR1A	72	96.875	Heterocephalus_glaber_female
ENSETEG00000000412	-	72	96.875	ENSHGLG00100006614	POLR1A	72	96.875	Heterocephalus_glaber_male
ENSETEG00000000412	-	71	87.500	ENSHCOG00000003345	polr1a	70	87.500	Hippocampus_comes
ENSETEG00000000412	-	71	83.871	ENSIPUG00000013174	polr1a	71	83.871	Ictalurus_punctatus
ENSETEG00000000412	-	72	100.000	ENSSTOG00000012580	POLR1A	72	100.000	Ictidomys_tridecemlineatus
ENSETEG00000000412	-	72	100.000	ENSJJAG00000013113	Polr1a	72	100.000	Jaculus_jaculus
ENSETEG00000000412	-	71	90.625	ENSKMAG00000007399	polr1a	71	90.625	Kryptolebias_marmoratus
ENSETEG00000000412	-	66	87.500	ENSLBEG00000015401	polr1a	69	87.500	Labrus_bergylta
ENSETEG00000000412	-	72	84.375	ENSLOCG00000010881	polr1a	72	84.375	Lepisosteus_oculatus
ENSETEG00000000412	-	72	100.000	ENSLAFG00000014948	POLR1A	72	100.000	Loxodonta_africana
ENSETEG00000000412	-	72	100.000	ENSMFAG00000046097	POLR1A	72	100.000	Macaca_fascicularis
ENSETEG00000000412	-	72	100.000	ENSMMUG00000015815	POLR1A	72	100.000	Macaca_mulatta
ENSETEG00000000412	-	72	100.000	ENSMNEG00000043313	POLR1A	72	100.000	Macaca_nemestrina
ENSETEG00000000412	-	72	100.000	ENSMLEG00000042428	POLR1A	72	100.000	Mandrillus_leucophaeus
ENSETEG00000000412	-	71	81.250	ENSMAMG00000016565	polr1a	72	81.250	Mastacembelus_armatus
ENSETEG00000000412	-	72	87.500	ENSMZEG00005004915	polr1a	72	87.500	Maylandia_zebra
ENSETEG00000000412	-	71	87.097	ENSMGAG00000013111	POLR1A	72	87.097	Meleagris_gallopavo
ENSETEG00000000412	-	63	96.875	ENSMAUG00000008497	Polr1a	69	96.875	Mesocricetus_auratus
ENSETEG00000000412	-	72	100.000	ENSMICG00000000757	POLR1A	72	100.000	Microcebus_murinus
ENSETEG00000000412	-	72	96.875	ENSMOCG00000000122	Polr1a	73	96.875	Microtus_ochrogaster
ENSETEG00000000412	-	72	87.500	ENSMMOG00000010216	polr1a	72	87.500	Mola_mola
ENSETEG00000000412	-	71	93.750	ENSMODG00000009335	POLR1A	72	93.750	Monodelphis_domestica
ENSETEG00000000412	-	71	90.625	ENSMALG00000013363	polr1a	72	90.625	Monopterus_albus
ENSETEG00000000412	-	72	96.875	MGP_CAROLIEiJ_G0028494	Polr1a	99	80.287	Mus_caroli
ENSETEG00000000412	-	72	96.875	ENSMUSG00000049553	Polr1a	99	80.645	Mus_musculus
ENSETEG00000000412	-	72	96.875	MGP_PahariEiJ_G0022230	Polr1a	99	81.004	Mus_pahari
ENSETEG00000000412	-	72	96.875	MGP_SPRETEiJ_G0029499	Polr1a	99	80.645	Mus_spretus
ENSETEG00000000412	-	72	100.000	ENSMPUG00000009135	POLR1A	72	100.000	Mustela_putorius_furo
ENSETEG00000000412	-	72	100.000	ENSMLUG00000015723	POLR1A	72	100.000	Myotis_lucifugus
ENSETEG00000000412	-	72	100.000	ENSNGAG00000017907	Polr1a	72	100.000	Nannospalax_galili
ENSETEG00000000412	-	72	87.500	ENSNBRG00000000519	polr1a	72	87.500	Neolamprologus_brichardi
ENSETEG00000000412	-	72	100.000	ENSNLEG00000002264	POLR1A	72	100.000	Nomascus_leucogenys
ENSETEG00000000412	-	66	79.516	ENSOPRG00000008269	POLR1A	67	79.516	Ochotona_princeps
ENSETEG00000000412	-	72	93.750	ENSODEG00000003542	POLR1A	72	93.750	Octodon_degus
ENSETEG00000000412	-	71	87.500	ENSONIG00000015895	polr1a	72	87.500	Oreochromis_niloticus
ENSETEG00000000412	-	72	100.000	ENSOCUG00000010138	POLR1A	72	100.000	Oryctolagus_cuniculus
ENSETEG00000000412	-	71	90.625	ENSORLG00000008753	polr1a	71	90.625	Oryzias_latipes
ENSETEG00000000412	-	72	90.625	ENSORLG00020020726	polr1a	70	90.625	Oryzias_latipes_hni
ENSETEG00000000412	-	67	90.625	ENSORLG00015016071	polr1a	68	90.625	Oryzias_latipes_hsok
ENSETEG00000000412	-	72	100.000	ENSOGAG00000004031	POLR1A	72	100.000	Otolemur_garnettii
ENSETEG00000000412	-	72	100.000	ENSOARG00000020601	POLR1A	72	100.000	Ovis_aries
ENSETEG00000000412	-	72	100.000	ENSPPAG00000042450	POLR1A	72	100.000	Pan_paniscus
ENSETEG00000000412	-	72	90.625	ENSPPRG00000006702	POLR1A	72	90.625	Panthera_pardus
ENSETEG00000000412	-	72	90.625	ENSPTIG00000018783	POLR1A	72	90.625	Panthera_tigris_altaica
ENSETEG00000000412	-	72	100.000	ENSPTRG00000012147	POLR1A	72	100.000	Pan_troglodytes
ENSETEG00000000412	-	72	100.000	ENSPANG00000025908	POLR1A	72	100.000	Papio_anubis
ENSETEG00000000412	-	71	84.375	ENSPKIG00000005468	polr1a	71	84.375	Paramormyrops_kingsleyae
ENSETEG00000000412	-	72	96.875	ENSPEMG00000022224	Polr1a	72	96.875	Peromyscus_maniculatus_bairdii
ENSETEG00000000412	-	70	79.781	ENSPCIG00000004222	POLR1A	73	79.781	Phascolarctos_cinereus
ENSETEG00000000412	-	71	87.500	ENSPFOG00000005025	polr1a	72	87.500	Poecilia_formosa
ENSETEG00000000412	-	71	87.500	ENSPLAG00000021389	polr1a	72	87.500	Poecilia_latipinna
ENSETEG00000000412	-	71	87.500	ENSPMEG00000006463	polr1a	71	87.500	Poecilia_mexicana
ENSETEG00000000412	-	71	87.500	ENSPREG00000002389	polr1a	72	87.500	Poecilia_reticulata
ENSETEG00000000412	-	72	100.000	ENSPPYG00000012217	POLR1A	72	100.000	Pongo_abelii
ENSETEG00000000412	-	63	96.000	ENSPCAG00000011582	POLR1A	63	96.000	Procavia_capensis
ENSETEG00000000412	-	72	100.000	ENSPCOG00000026987	POLR1A	72	100.000	Propithecus_coquereli
ENSETEG00000000412	-	67	100.000	ENSPVAG00000012674	POLR1A	68	100.000	Pteropus_vampyrus
ENSETEG00000000412	-	72	87.500	ENSPNYG00000000026	polr1a	72	87.500	Pundamilia_nyererei
ENSETEG00000000412	-	71	84.375	ENSPNAG00000019223	polr1a	71	84.375	Pygocentrus_nattereri
ENSETEG00000000412	-	72	96.875	ENSRNOG00000009545	Polr1a	72	96.875	Rattus_norvegicus
ENSETEG00000000412	-	72	100.000	ENSRBIG00000028335	POLR1A	72	100.000	Rhinopithecus_bieti
ENSETEG00000000412	-	72	100.000	ENSRROG00000031473	POLR1A	72	100.000	Rhinopithecus_roxellana
ENSETEG00000000412	-	69	34.232	YOR341W	RPA190	72	34.232	Saccharomyces_cerevisiae
ENSETEG00000000412	-	72	100.000	ENSSBOG00000030262	POLR1A	72	100.000	Saimiri_boliviensis_boliviensis
ENSETEG00000000412	-	72	93.750	ENSSHAG00000014739	POLR1A	72	93.750	Sarcophilus_harrisii
ENSETEG00000000412	-	72	87.500	ENSSFOG00015019716	polr1a	72	87.500	Scleropages_formosus
ENSETEG00000000412	-	71	90.625	ENSSMAG00000014342	polr1a	72	90.625	Scophthalmus_maximus
ENSETEG00000000412	-	71	90.625	ENSSDUG00000014631	polr1a	72	90.625	Seriola_dumerili
ENSETEG00000000412	-	71	90.625	ENSSLDG00000024095	polr1a	71	90.625	Seriola_lalandi_dorsalis
ENSETEG00000000412	-	56	92.000	ENSSARG00000003136	-	56	92.000	Sorex_araneus
ENSETEG00000000412	-	72	90.625	ENSSPUG00000004215	POLR1A	71	90.625	Sphenodon_punctatus
ENSETEG00000000412	-	53	58.022	ENSSPAG00000016341	polr1a	68	79.821	Stegastes_partitus
ENSETEG00000000412	-	65	87.941	ENSSSCG00000008226	POLR1A	77	87.941	Sus_scrofa
ENSETEG00000000412	-	70	93.750	ENSTGUG00000010704	POLR1A	71	93.750	Taeniopygia_guttata
ENSETEG00000000412	-	72	87.500	ENSTRUG00000002210	polr1a	72	87.500	Takifugu_rubripes
ENSETEG00000000412	-	72	84.375	ENSTNIG00000010116	polr1a	72	84.375	Tetraodon_nigroviridis
ENSETEG00000000412	-	72	100.000	ENSTTRG00000008597	POLR1A	72	100.000	Tursiops_truncatus
ENSETEG00000000412	-	72	96.875	ENSUMAG00000006700	POLR1A	85	86.460	Ursus_maritimus
ENSETEG00000000412	-	72	100.000	ENSVVUG00000001245	POLR1A	72	100.000	Vulpes_vulpes
ENSETEG00000000412	-	66	100.000	ENSXETG00000001952	polr1a	71	100.000	Xenopus_tropicalis
ENSETEG00000000412	-	71	87.500	ENSXMAG00000004032	polr1a	72	87.500	Xiphophorus_maculatus