EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000000739 (Gene tree)
Gene ID: -
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 211826 bases
Position: chrGeneScaffold_586:1930-213755
Accession: 25521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000000596	S1	PF00575.23	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000000739	SRBD1-201	2868	-	ENSETEP00000000596	955 (aa)	-	UPI0000E42E86

Gene Model

Click here to download ENSETEG00000000739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000000739's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000000739	SRBD1	91	82.500	ENSG00000068784	SRBD1	89	82.500	Homo_sapiens
ENSETEG00000000739	SRBD1	89	57.299	ENSAPOG00000005103	si:ch211-117n7.8	87	57.299	Acanthochromis_polyacanthus
ENSETEG00000000739	SRBD1	91	83.363	ENSAMEG00000005993	SRBD1	89	83.363	Ailuropoda_melanoleuca
ENSETEG00000000739	SRBD1	76	57.741	ENSACIG00000009875	si:ch211-117n7.8	75	57.923	Amphilophus_citrinellus
ENSETEG00000000739	SRBD1	82	57.117	ENSAOCG00000024718	si:ch211-117n7.8	80	57.377	Amphiprion_ocellaris
ENSETEG00000000739	SRBD1	82	57.559	ENSAPEG00000002645	si:ch211-117n7.8	82	57.377	Amphiprion_percula
ENSETEG00000000739	SRBD1	77	57.923	ENSATEG00000010844	si:ch211-117n7.8	74	57.664	Anabas_testudineus
ENSETEG00000000739	SRBD1	80	73.571	ENSAPLG00000006313	SRBD1	89	73.571	Anas_platyrhynchos
ENSETEG00000000739	SRBD1	91	83.214	ENSANAG00000025573	SRBD1	89	83.214	Aotus_nancymaae
ENSETEG00000000739	SRBD1	77	57.532	ENSACLG00000024219	si:ch211-117n7.8	84	57.685	Astatotilapia_calliptera
ENSETEG00000000739	SRBD1	79	61.091	ENSAMXG00000004294	SRBD1	84	61.091	Astyanax_mexicanus
ENSETEG00000000739	SRBD1	91	82.531	ENSBTAG00000007508	SRBD1	86	82.531	Bos_taurus
ENSETEG00000000739	SRBD1	91	81.964	ENSCJAG00000000727	SRBD1	89	81.964	Callithrix_jacchus
ENSETEG00000000739	SRBD1	91	82.740	ENSCAFG00000002554	SRBD1	89	82.740	Canis_familiaris
ENSETEG00000000739	SRBD1	91	81.818	ENSCAFG00020026284	SRBD1	95	78.049	Canis_lupus_dingo
ENSETEG00000000739	SRBD1	91	82.531	ENSCHIG00000016535	SRBD1	88	82.531	Capra_hircus
ENSETEG00000000739	SRBD1	91	83.126	ENSTSYG00000012797	SRBD1	89	83.126	Carlito_syrichta
ENSETEG00000000739	SRBD1	92	83.607	ENSCPOG00000004773	SRBD1	89	83.607	Cavia_porcellus
ENSETEG00000000739	SRBD1	91	83.036	ENSCCAG00000025589	SRBD1	89	83.036	Cebus_capucinus
ENSETEG00000000739	SRBD1	91	83.214	ENSCATG00000039530	SRBD1	89	83.214	Cercocebus_atys
ENSETEG00000000739	SRBD1	92	83.789	ENSCLAG00000008623	SRBD1	89	83.789	Chinchilla_lanigera
ENSETEG00000000739	SRBD1	91	83.214	ENSCSAG00000013350	SRBD1	89	83.214	Chlorocebus_sabaeus
ENSETEG00000000739	SRBD1	72	94.118	ENSCHOG00000003805	SRBD1	70	94.118	Choloepus_hoffmanni
ENSETEG00000000739	SRBD1	90	75.492	ENSCPBG00000005677	SRBD1	89	75.492	Chrysemys_picta_bellii
ENSETEG00000000739	SRBD1	72	40.820	ENSCING00000005950	-	89	40.575	Ciona_intestinalis
ENSETEG00000000739	SRBD1	72	41.924	ENSCSAVG00000000861	-	87	41.924	Ciona_savignyi
ENSETEG00000000739	SRBD1	91	82.679	ENSCANG00000016307	SRBD1	90	82.679	Colobus_angolensis_palliatus
ENSETEG00000000739	SRBD1	92	80.325	ENSCGRG00001000513	Srbd1	89	79.422	Cricetulus_griseus_chok1gshd
ENSETEG00000000739	SRBD1	92	80.325	ENSCGRG00000002283	Srbd1	89	79.422	Cricetulus_griseus_crigri
ENSETEG00000000739	SRBD1	77	56.443	ENSCSEG00000000856	si:ch211-117n7.8	74	56.080	Cynoglossus_semilaevis
ENSETEG00000000739	SRBD1	77	57.482	ENSCVAG00000020212	si:ch211-117n7.8	87	57.299	Cyprinodon_variegatus
ENSETEG00000000739	SRBD1	91	81.915	ENSDNOG00000018686	SRBD1	89	81.915	Dasypus_novemcinctus
ENSETEG00000000739	SRBD1	92	82.971	ENSDORG00000010468	Srbd1	89	82.971	Dipodomys_ordii
ENSETEG00000000739	SRBD1	87	35.986	FBgn0051156	CG31156	86	35.624	Drosophila_melanogaster
ENSETEG00000000739	SRBD1	57	45.357	ENSEBUG00000008902	si:ch211-117n7.8	72	45.000	Eptatretus_burgeri
ENSETEG00000000739	SRBD1	81	96.800	ENSEASG00005003132	SRBD1	83	96.063	Equus_asinus_asinus
ENSETEG00000000739	SRBD1	91	82.709	ENSECAG00000013865	SRBD1	88	82.709	Equus_caballus
ENSETEG00000000739	SRBD1	89	58.258	ENSELUG00000012592	si:ch211-117n7.8	81	58.258	Esox_lucius
ENSETEG00000000739	SRBD1	91	83.066	ENSFCAG00000005101	SRBD1	89	83.066	Felis_catus
ENSETEG00000000739	SRBD1	86	72.777	ENSFALG00000012966	SRBD1	89	72.414	Ficedula_albicollis
ENSETEG00000000739	SRBD1	92	82.878	ENSFDAG00000016670	SRBD1	90	82.696	Fukomys_damarensis
ENSETEG00000000739	SRBD1	89	58.364	ENSFHEG00000019480	si:ch211-117n7.8	83	58.364	Fundulus_heteroclitus
ENSETEG00000000739	SRBD1	79	73.968	ENSGALG00000009990	SRBD1	89	73.118	Gallus_gallus
ENSETEG00000000739	SRBD1	82	58.439	ENSGAFG00000019664	si:ch211-117n7.8	79	58.577	Gambusia_affinis
ENSETEG00000000739	SRBD1	57	55.851	ENSGACG00000010794	si:ch211-117n7.8	90	55.851	Gasterosteus_aculeatus
ENSETEG00000000739	SRBD1	82	71.924	ENSGAGG00000006166	SRBD1	90	74.955	Gopherus_agassizii
ENSETEG00000000739	SRBD1	92	82.679	ENSGGOG00000005910	SRBD1	92	82.679	Gorilla_gorilla
ENSETEG00000000739	SRBD1	63	55.435	ENSHBUG00000013207	si:ch211-117n7.8	80	55.596	Haplochromis_burtoni
ENSETEG00000000739	SRBD1	92	82.790	ENSHGLG00000018153	-	89	82.790	Heterocephalus_glaber_female
ENSETEG00000000739	SRBD1	92	82.609	ENSHGLG00100015183	-	89	82.609	Heterocephalus_glaber_male
ENSETEG00000000739	SRBD1	90	60.766	ENSIPUG00000009661	srbd1	86	60.036	Ictalurus_punctatus
ENSETEG00000000739	SRBD1	92	84.755	ENSSTOG00000005898	SRBD1	89	84.755	Ictidomys_tridecemlineatus
ENSETEG00000000739	SRBD1	92	81.159	ENSJJAG00000022244	Srbd1	90	81.159	Jaculus_jaculus
ENSETEG00000000739	SRBD1	77	57.741	ENSKMAG00000003473	si:ch211-117n7.8	73	57.482	Kryptolebias_marmoratus
ENSETEG00000000739	SRBD1	77	57.013	ENSLBEG00000027518	si:ch211-117n7.8	73	56.831	Labrus_bergylta
ENSETEG00000000739	SRBD1	77	69.946	ENSLACG00000009790	SRBD1	91	69.946	Latimeria_chalumnae
ENSETEG00000000739	SRBD1	90	62.568	ENSLOCG00000016360	si:ch211-117n7.8	88	62.976	Lepisosteus_oculatus
ENSETEG00000000739	SRBD1	91	83.214	ENSMFAG00000042026	SRBD1	89	83.214	Macaca_fascicularis
ENSETEG00000000739	SRBD1	91	83.214	ENSMMUG00000003490	SRBD1	89	83.214	Macaca_mulatta
ENSETEG00000000739	SRBD1	91	78.929	ENSMNEG00000034701	SRBD1	89	78.929	Macaca_nemestrina
ENSETEG00000000739	SRBD1	91	83.036	ENSMLEG00000000745	SRBD1	89	83.036	Mandrillus_leucophaeus
ENSETEG00000000739	SRBD1	75	56.727	ENSMAMG00000021921	si:ch211-117n7.8	87	56.545	Mastacembelus_armatus
ENSETEG00000000739	SRBD1	90	57.532	ENSMZEG00005027369	si:ch211-117n7.8	84	57.685	Maylandia_zebra
ENSETEG00000000739	SRBD1	74	73.084	ENSMGAG00000010273	SRBD1	90	73.084	Meleagris_gallopavo
ENSETEG00000000739	SRBD1	73	76.804	ENSMAUG00000013916	Srbd1	90	76.460	Mesocricetus_auratus
ENSETEG00000000739	SRBD1	91	83.393	ENSMICG00000007835	SRBD1	89	83.393	Microcebus_murinus
ENSETEG00000000739	SRBD1	92	80.325	ENSMOCG00000018716	Srbd1	89	79.783	Microtus_ochrogaster
ENSETEG00000000739	SRBD1	83	57.741	ENSMMOG00000007507	si:ch211-117n7.8	83	56.962	Mola_mola
ENSETEG00000000739	SRBD1	75	56.934	ENSMALG00000001562	si:ch211-117n7.8	87	56.934	Monopterus_albus
ENSETEG00000000739	SRBD1	91	80.470	MGP_CAROLIEiJ_G0021934	Srbd1	99	77.632	Mus_caroli
ENSETEG00000000739	SRBD1	92	80.470	ENSMUSG00000024135	Srbd1	100	72.887	Mus_musculus
ENSETEG00000000739	SRBD1	92	79.566	MGP_PahariEiJ_G0020924	Srbd1	89	78.843	Mus_pahari
ENSETEG00000000739	SRBD1	92	80.651	MGP_SPRETEiJ_G0022850	Srbd1	89	80.036	Mus_spretus
ENSETEG00000000739	SRBD1	91	81.996	ENSMLUG00000007039	SRBD1	89	81.996	Myotis_lucifugus
ENSETEG00000000739	SRBD1	92	77.148	ENSNGAG00000011893	Srbd1	90	77.148	Nannospalax_galili
ENSETEG00000000739	SRBD1	77	57.713	ENSNBRG00000012873	si:ch211-117n7.8	90	57.866	Neolamprologus_brichardi
ENSETEG00000000739	SRBD1	91	82.143	ENSNLEG00000016877	SRBD1	89	82.143	Nomascus_leucogenys
ENSETEG00000000739	SRBD1	92	81.785	ENSODEG00000012095	SRBD1	89	81.785	Octodon_degus
ENSETEG00000000739	SRBD1	90	57.532	ENSONIG00000000945	si:ch211-117n7.8	90	56.437	Oreochromis_niloticus
ENSETEG00000000739	SRBD1	91	81.818	ENSOCUG00000015385	SRBD1	89	82.175	Oryctolagus_cuniculus
ENSETEG00000000739	SRBD1	91	53.188	ENSORLG00000004427	si:ch211-117n7.8	87	53.188	Oryzias_latipes
ENSETEG00000000739	SRBD1	91	56.182	ENSORLG00020012792	si:ch211-117n7.8	88	56.204	Oryzias_latipes_hni
ENSETEG00000000739	SRBD1	89	56.648	ENSORLG00015018598	si:ch211-117n7.8	83	56.648	Oryzias_latipes_hsok
ENSETEG00000000739	SRBD1	90	55.839	ENSOMEG00000012229	si:ch211-117n7.8	81	64.894	Oryzias_melastigma
ENSETEG00000000739	SRBD1	92	76.292	ENSOGAG00000001076	SRBD1	89	76.292	Otolemur_garnettii
ENSETEG00000000739	SRBD1	91	74.874	ENSOARG00000005958	SRBD1	89	74.874	Ovis_aries
ENSETEG00000000739	SRBD1	91	82.321	ENSPPAG00000038442	SRBD1	89	82.321	Pan_paniscus
ENSETEG00000000739	SRBD1	91	83.393	ENSPPRG00000003449	SRBD1	89	83.393	Panthera_pardus
ENSETEG00000000739	SRBD1	91	83.571	ENSPTIG00000012495	SRBD1	89	83.571	Panthera_tigris_altaica
ENSETEG00000000739	SRBD1	91	82.321	ENSPTRG00000011889	SRBD1	89	82.321	Pan_troglodytes
ENSETEG00000000739	SRBD1	91	83.036	ENSPANG00000008063	SRBD1	89	83.036	Papio_anubis
ENSETEG00000000739	SRBD1	90	57.377	ENSPKIG00000021973	si:ch211-117n7.8	88	57.013	Paramormyrops_kingsleyae
ENSETEG00000000739	SRBD1	86	74.955	ENSPSIG00000008992	SRBD1	89	74.955	Pelodiscus_sinensis
ENSETEG00000000739	SRBD1	77	55.839	ENSPMGG00000013348	si:ch211-117n7.8	88	55.898	Periophthalmus_magnuspinnatus
ENSETEG00000000739	SRBD1	92	77.217	ENSPEMG00000020684	Srbd1	90	76.696	Peromyscus_maniculatus_bairdii
ENSETEG00000000739	SRBD1	77	57.847	ENSPFOG00000010650	si:ch211-117n7.8	73	58.394	Poecilia_formosa
ENSETEG00000000739	SRBD1	77	58.258	ENSPLAG00000002141	si:ch211-117n7.8	73	58.577	Poecilia_latipinna
ENSETEG00000000739	SRBD1	77	57.847	ENSPMEG00000018537	si:ch211-117n7.8	73	58.394	Poecilia_mexicana
ENSETEG00000000739	SRBD1	77	57.246	ENSPREG00000003258	si:ch211-117n7.8	75	57.741	Poecilia_reticulata
ENSETEG00000000739	SRBD1	88	94.709	ENSPPYG00000012444	SRBD1	80	94.709	Pongo_abelii
ENSETEG00000000739	SRBD1	76	90.458	ENSPCAG00000005629	SRBD1	78	90.458	Procavia_capensis
ENSETEG00000000739	SRBD1	80	91.304	ENSPCOG00000017669	SRBD1	82	91.304	Propithecus_coquereli
ENSETEG00000000739	SRBD1	81	86.957	ENSPVAG00000001782	SRBD1	80	86.957	Pteropus_vampyrus
ENSETEG00000000739	SRBD1	77	55.435	ENSPNYG00000000508	si:ch211-117n7.8	76	55.596	Pundamilia_nyererei
ENSETEG00000000739	SRBD1	90	61.496	ENSPNAG00000013492	SRBD1	86	61.496	Pygocentrus_nattereri
ENSETEG00000000739	SRBD1	91	79.603	ENSRNOG00000014720	Srbd1	89	79.603	Rattus_norvegicus
ENSETEG00000000739	SRBD1	91	82.679	ENSRBIG00000033486	SRBD1	90	82.679	Rhinopithecus_bieti
ENSETEG00000000739	SRBD1	91	82.679	ENSRROG00000041599	SRBD1	90	82.679	Rhinopithecus_roxellana
ENSETEG00000000739	SRBD1	91	83.214	ENSSBOG00000024982	SRBD1	89	83.214	Saimiri_boliviensis_boliviensis
ENSETEG00000000739	SRBD1	77	59.016	ENSSFOG00015001128	si:ch211-117n7.8	80	58.834	Scleropages_formosus
ENSETEG00000000739	SRBD1	92	57.013	ENSSMAG00000018256	si:ch211-117n7.8	88	57.195	Scophthalmus_maximus
ENSETEG00000000739	SRBD1	89	57.273	ENSSLDG00000023189	si:ch211-117n7.8	86	56.781	Seriola_lalandi_dorsalis
ENSETEG00000000739	SRBD1	83	80.901	ENSSARG00000009740	SRBD1	80	80.901	Sorex_araneus
ENSETEG00000000739	SRBD1	82	74.364	ENSSPUG00000010475	SRBD1	91	73.694	Sphenodon_punctatus
ENSETEG00000000739	SRBD1	82	54.197	ENSSPAG00000008092	-	86	54.380	Stegastes_partitus
ENSETEG00000000739	SRBD1	91	83.066	ENSSSCG00000008445	SRBD1	88	83.066	Sus_scrofa
ENSETEG00000000739	SRBD1	77	72.242	ENSTGUG00000003878	SRBD1	90	71.708	Taeniopygia_guttata
ENSETEG00000000739	SRBD1	92	56.934	ENSTRUG00000007080	si:ch211-117n7.8	88	56.934	Takifugu_rubripes
ENSETEG00000000739	SRBD1	92	54.578	ENSTNIG00000007464	si:ch211-117n7.8	88	53.737	Tetraodon_nigroviridis
ENSETEG00000000739	SRBD1	56	97.143	ENSTBEG00000004556	SRBD1	55	97.143	Tupaia_belangeri
ENSETEG00000000739	SRBD1	85	85.159	ENSTTRG00000011871	SRBD1	82	85.159	Tursiops_truncatus
ENSETEG00000000739	SRBD1	91	83.422	ENSUAMG00000008126	SRBD1	97	81.522	Ursus_americanus
ENSETEG00000000739	SRBD1	91	83.601	ENSUMAG00000012902	SRBD1	88	83.601	Ursus_maritimus
ENSETEG00000000739	SRBD1	85	83.036	ENSVPAG00000006825	SRBD1	91	83.036	Vicugna_pacos
ENSETEG00000000739	SRBD1	91	82.888	ENSVVUG00000005389	SRBD1	89	82.888	Vulpes_vulpes
ENSETEG00000000739	SRBD1	92	49.497	ENSXETG00000002760	srbd1	90	49.663	Xenopus_tropicalis
ENSETEG00000000739	SRBD1	77	58.076	ENSXMAG00000016861	si:ch211-117n7.8	73	58.212	Xiphophorus_maculatus