EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000001147 (Gene tree)
Gene ID: -
Gene Symbol: R3HCC1
Alias: DKFZp564N123
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 10898 bases
Position: chrGeneScaffold_4830:79325-90222
Accession: 27329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000000927	R3H	PF01424.22	3.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000001147	R3HCC1-201	1368	-	ENSETEP00000000927	455 (aa)	-	UPI0000E413F8

Gene Model

Click here to download ENSETEG00000001147's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000001147's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000001147	R3HCC1	98	67.416	ENSG00000104679	R3HCC1	100	95.349	Homo_sapiens
ENSETEG00000001147	R3HCC1	92	31.034	ENSAPOG00000003616	r3hcc1	91	30.303	Acanthochromis_polyacanthus
ENSETEG00000001147	R3HCC1	97	68.864	ENSAMEG00000002963	R3HCC1	95	67.834	Ailuropoda_melanoleuca
ENSETEG00000001147	R3HCC1	91	30.282	ENSAOCG00000003945	r3hcc1	97	31.280	Amphiprion_ocellaris
ENSETEG00000001147	R3HCC1	94	44.369	ENSACAG00000016627	R3HCC1	96	43.844	Anolis_carolinensis
ENSETEG00000001147	R3HCC1	98	68.834	ENSANAG00000036169	R3HCC1	96	69.058	Aotus_nancymaae
ENSETEG00000001147	R3HCC1	97	68.397	ENSBTAG00000025830	R3HCC1	96	68.172	Bos_taurus
ENSETEG00000001147	R3HCC1	98	67.640	ENSCJAG00000020118	R3HCC1	99	60.000	Callithrix_jacchus
ENSETEG00000001147	R3HCC1	97	66.140	ENSCAFG00000009210	R3HCC1	96	66.140	Canis_familiaris
ENSETEG00000001147	R3HCC1	76	67.529	ENSCAFG00020012870	R3HCC1	81	67.241	Canis_lupus_dingo
ENSETEG00000001147	R3HCC1	96	62.528	ENSCHIG00000009107	R3HCC1	98	63.053	Capra_hircus
ENSETEG00000001147	R3HCC1	98	69.283	ENSTSYG00000000511	R3HCC1	78	69.283	Carlito_syrichta
ENSETEG00000001147	R3HCC1	86	54.884	ENSCAPG00000015813	R3HCC1	99	53.425	Cavia_aperea
ENSETEG00000001147	R3HCC1	95	58.263	ENSCPOG00000009696	R3HCC1	99	56.875	Cavia_porcellus
ENSETEG00000001147	R3HCC1	98	68.539	ENSCCAG00000037811	R3HCC1	95	68.192	Cebus_capucinus
ENSETEG00000001147	R3HCC1	100	67.538	ENSCATG00000032971	R3HCC1	92	67.974	Cercocebus_atys
ENSETEG00000001147	R3HCC1	96	67.808	ENSCLAG00000015556	R3HCC1	87	66.374	Chinchilla_lanigera
ENSETEG00000001147	R3HCC1	100	67.538	ENSCSAG00000016250	R3HCC1	95	67.974	Chlorocebus_sabaeus
ENSETEG00000001147	R3HCC1	97	66.966	ENSCHOG00000000396	R3HCC1	99	66.231	Choloepus_hoffmanni
ENSETEG00000001147	R3HCC1	100	67.538	ENSCANG00000029441	R3HCC1	95	67.756	Colobus_angolensis_palliatus
ENSETEG00000001147	R3HCC1	95	56.729	ENSCGRG00001014977	R3hcc1	98	56.846	Cricetulus_griseus_chok1gshd
ENSETEG00000001147	R3HCC1	95	56.729	ENSCGRG00000004454	R3hcc1	98	56.846	Cricetulus_griseus_crigri
ENSETEG00000001147	R3HCC1	93	30.303	ENSCSEG00000005748	r3hcc1	99	30.233	Cynoglossus_semilaevis
ENSETEG00000001147	R3HCC1	94	30.679	ENSDARG00000099593	r3hcc1	98	30.211	Danio_rerio
ENSETEG00000001147	R3HCC1	96	72.045	ENSDNOG00000007168	R3HCC1	92	72.045	Dasypus_novemcinctus
ENSETEG00000001147	R3HCC1	97	57.992	ENSDORG00000026365	R3hcc1	99	59.708	Dipodomys_ordii
ENSETEG00000001147	R3HCC1	96	70.320	ENSEASG00005018782	R3HCC1	80	70.091	Equus_asinus_asinus
ENSETEG00000001147	R3HCC1	96	69.863	ENSECAG00000025013	R3HCC1	97	69.635	Equus_caballus
ENSETEG00000001147	R3HCC1	99	63.656	ENSEEUG00000011918	R3HCC1	99	63.656	Erinaceus_europaeus
ENSETEG00000001147	R3HCC1	90	30.631	ENSELUG00000023650	r3hcc1	99	31.494	Esox_lucius
ENSETEG00000001147	R3HCC1	99	68.502	ENSFCAG00000012395	R3HCC1	97	69.300	Felis_catus
ENSETEG00000001147	R3HCC1	96	35.686	ENSFALG00000001646	R3HCC1	84	36.571	Ficedula_albicollis
ENSETEG00000001147	R3HCC1	97	58.621	ENSFDAG00000001572	R3HCC1	99	58.621	Fukomys_damarensis
ENSETEG00000001147	R3HCC1	65	35.862	ENSGMOG00000017590	-	82	35.862	Gadus_morhua
ENSETEG00000001147	R3HCC1	94	31.222	ENSGAFG00000008747	-	91	31.027	Gambusia_affinis
ENSETEG00000001147	R3HCC1	100	67.756	ENSGGOG00000013817	R3HCC1	99	67.273	Gorilla_gorilla
ENSETEG00000001147	R3HCC1	95	64.055	ENSHGLG00000010517	R3HCC1	93	63.355	Heterocephalus_glaber_female
ENSETEG00000001147	R3HCC1	95	64.055	ENSHGLG00100006388	R3HCC1	93	63.355	Heterocephalus_glaber_male
ENSETEG00000001147	R3HCC1	94	30.839	ENSHCOG00000011745	r3hcc1	71	38.217	Hippocampus_comes
ENSETEG00000001147	R3HCC1	95	33.333	ENSIPUG00000024504	r3hcc1	87	31.891	Ictalurus_punctatus
ENSETEG00000001147	R3HCC1	97	58.652	ENSSTOG00000027130	R3HCC1	95	58.652	Ictidomys_tridecemlineatus
ENSETEG00000001147	R3HCC1	97	57.996	ENSJJAG00000013075	R3hcc1	100	59.355	Jaculus_jaculus
ENSETEG00000001147	R3HCC1	94	36.712	ENSLACG00000011894	R3HCC1	97	36.323	Latimeria_chalumnae
ENSETEG00000001147	R3HCC1	94	33.184	ENSLOCG00000015442	r3hcc1	99	32.464	Lepisosteus_oculatus
ENSETEG00000001147	R3HCC1	100	66.799	ENSLAFG00000016137	R3HCC1	99	66.799	Loxodonta_africana
ENSETEG00000001147	R3HCC1	100	67.538	ENSMFAG00000032894	R3HCC1	93	68.043	Macaca_fascicularis
ENSETEG00000001147	R3HCC1	100	67.974	ENSMMUG00000016655	R3HCC1	94	68.478	Macaca_mulatta
ENSETEG00000001147	R3HCC1	100	67.320	ENSMNEG00000043283	R3HCC1	99	60.771	Macaca_nemestrina
ENSETEG00000001147	R3HCC1	100	67.609	ENSMLEG00000030147	R3HCC1	95	67.826	Mandrillus_leucophaeus
ENSETEG00000001147	R3HCC1	98	43.137	ENSMGAG00000001356	R3HCC1	94	43.137	Meleagris_gallopavo
ENSETEG00000001147	R3HCC1	98	68.315	ENSMICG00000011146	R3HCC1	95	68.233	Microcebus_murinus
ENSETEG00000001147	R3HCC1	55	60.317	ENSMOCG00000018508	R3hcc1	99	55.876	Microtus_ochrogaster
ENSETEG00000001147	R3HCC1	95	45.575	ENSMODG00000016809	-	100	46.239	Monodelphis_domestica
ENSETEG00000001147	R3HCC1	97	57.317	MGP_CAROLIEiJ_G0019467	R3hcc1	99	53.644	Mus_caroli
ENSETEG00000001147	R3HCC1	97	57.114	ENSMUSG00000034194	R3hcc1	99	56.301	Mus_musculus
ENSETEG00000001147	R3HCC1	97	56.768	MGP_SPRETEiJ_G0020359	R3hcc1	99	55.960	Mus_spretus
ENSETEG00000001147	R3HCC1	97	68.778	ENSMPUG00000003457	R3HCC1	90	68.271	Mustela_putorius_furo
ENSETEG00000001147	R3HCC1	97	65.315	ENSMLUG00000000266	R3HCC1	95	65.939	Myotis_lucifugus
ENSETEG00000001147	R3HCC1	97	63.181	ENSNGAG00000016747	R3hcc1	99	63.181	Nannospalax_galili
ENSETEG00000001147	R3HCC1	88	66.915	ENSNLEG00000015944	R3HCC1	89	66.268	Nomascus_leucogenys
ENSETEG00000001147	R3HCC1	96	51.011	ENSMEUG00000010587	R3HCC1	98	50.562	Notamacropus_eugenii
ENSETEG00000001147	R3HCC1	98	60.356	ENSOPRG00000013390	R3HCC1	97	59.465	Ochotona_princeps
ENSETEG00000001147	R3HCC1	95	59.402	ENSODEG00000007529	R3HCC1	98	59.915	Octodon_degus
ENSETEG00000001147	R3HCC1	96	53.483	ENSOANG00000013877	R3HCC1	97	53.587	Ornithorhynchus_anatinus
ENSETEG00000001147	R3HCC1	96	62.844	ENSOCUG00000023554	R3HCC1	86	62.217	Oryctolagus_cuniculus
ENSETEG00000001147	R3HCC1	99	63.415	ENSOGAG00000001291	R3HCC1	94	63.415	Otolemur_garnettii
ENSETEG00000001147	R3HCC1	96	68.182	ENSOARG00000010146	R3HCC1	98	66.964	Ovis_aries
ENSETEG00000001147	R3HCC1	98	67.416	ENSPPAG00000033165	R3HCC1	99	67.500	Pan_paniscus
ENSETEG00000001147	R3HCC1	97	68.182	ENSPPRG00000002522	R3HCC1	100	68.409	Panthera_pardus
ENSETEG00000001147	R3HCC1	89	65.679	ENSPTIG00000011230	R3HCC1	95	65.835	Panthera_tigris_altaica
ENSETEG00000001147	R3HCC1	98	68.090	ENSPTRG00000020076	R3HCC1	95	67.756	Pan_troglodytes
ENSETEG00000001147	R3HCC1	100	68.043	ENSPANG00000000453	R3HCC1	95	67.974	Papio_anubis
ENSETEG00000001147	R3HCC1	87	33.663	ENSPKIG00000014426	-	95	33.166	Paramormyrops_kingsleyae
ENSETEG00000001147	R3HCC1	87	33.007	ENSPKIG00000020397	-	95	32.178	Paramormyrops_kingsleyae
ENSETEG00000001147	R3HCC1	97	42.766	ENSPSIG00000017664	R3HCC1	99	43.070	Pelodiscus_sinensis
ENSETEG00000001147	R3HCC1	97	57.320	ENSPEMG00000007118	R3hcc1	99	55.670	Peromyscus_maniculatus_bairdii
ENSETEG00000001147	R3HCC1	87	47.445	ENSPCIG00000022718	-	83	46.988	Phascolarctos_cinereus
ENSETEG00000001147	R3HCC1	94	31.034	ENSPFOG00000022301	r3hcc1	90	30.159	Poecilia_formosa
ENSETEG00000001147	R3HCC1	94	31.034	ENSPMEG00000022515	r3hcc1	90	30.159	Poecilia_mexicana
ENSETEG00000001147	R3HCC1	94	30.963	ENSPREG00000000713	r3hcc1	90	30.505	Poecilia_reticulata
ENSETEG00000001147	R3HCC1	89	65.764	ENSPPYG00000018436	R3HCC1	99	66.010	Pongo_abelii
ENSETEG00000001147	R3HCC1	74	83.333	ENSPCAG00000012229	R3HCC1	73	83.333	Procavia_capensis
ENSETEG00000001147	R3HCC1	96	67.654	ENSPCOG00000027554	R3HCC1	99	67.654	Propithecus_coquereli
ENSETEG00000001147	R3HCC1	97	66.742	ENSPVAG00000009829	R3HCC1	96	66.516	Pteropus_vampyrus
ENSETEG00000001147	R3HCC1	97	56.452	ENSRNOG00000016777	AABR07018321.1	85	50.778	Rattus_norvegicus
ENSETEG00000001147	R3HCC1	97	67.955	ENSRBIG00000028045	R3HCC1	99	68.182	Rhinopithecus_bieti
ENSETEG00000001147	R3HCC1	100	67.756	ENSRROG00000031126	R3HCC1	99	61.364	Rhinopithecus_roxellana
ENSETEG00000001147	R3HCC1	97	67.045	ENSSBOG00000022590	R3HCC1	99	67.273	Saimiri_boliviensis_boliviensis
ENSETEG00000001147	R3HCC1	95	46.188	ENSSHAG00000016526	-	57	66.667	Sarcophilus_harrisii
ENSETEG00000001147	R3HCC1	88	34.398	ENSSFOG00015013507	r3hcc1	98	33.985	Scleropages_formosus
ENSETEG00000001147	R3HCC1	98	69.507	ENSSSCG00000039915	-	96	68.860	Sus_scrofa
ENSETEG00000001147	R3HCC1	96	62.273	ENSSSCG00000037347	-	90	62.045	Sus_scrofa
ENSETEG00000001147	R3HCC1	99	62.031	ENSTTRG00000012247	R3HCC1	99	62.031	Tursiops_truncatus
ENSETEG00000001147	R3HCC1	96	67.048	ENSUAMG00000007344	R3HCC1	99	67.277	Ursus_americanus
ENSETEG00000001147	R3HCC1	97	67.043	ENSVVUG00000005056	R3HCC1	96	66.817	Vulpes_vulpes
ENSETEG00000001147	R3HCC1	91	30.404	ENSXCOG00000017626	r3hcc1	89	31.043	Xiphophorus_couchianus
ENSETEG00000001147	R3HCC1	94	31.136	ENSXMAG00000018375	r3hcc1	91	31.746	Xiphophorus_maculatus