EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000001406 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 9287 bases
Position: chrGeneScaffold_6894:3522-12808
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000001131	SMN	PF06003.12	2e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000001404	-	612	-	ENSETEP00000001131	204 (aa)	-	UPI0000E43EA9

Gene Model

Click here to download ENSETEG00000001406's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000001406's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000001406	-	89	70.109	ENSG00000205571	SMN2	86	66.667	Homo_sapiens
ENSETEG00000001406	-	89	70.109	ENSG00000172062	SMN1	86	66.667	Homo_sapiens
ENSETEG00000001406	-	90	45.789	ENSAPOG00000011324	smn1	64	45.055	Acanthochromis_polyacanthus
ENSETEG00000001406	-	89	72.283	ENSAMEG00000003316	-	69	74.396	Ailuropoda_melanoleuca
ENSETEG00000001406	-	56	52.066	ENSACIG00000007598	smn1	88	45.732	Amphilophus_citrinellus
ENSETEG00000001406	-	82	44.134	ENSACIG00000019772	-	58	46.795	Amphilophus_citrinellus
ENSETEG00000001406	-	87	46.111	ENSAOCG00000024444	smn1	65	44.086	Amphiprion_ocellaris
ENSETEG00000001406	-	87	46.667	ENSAPEG00000016504	smn1	65	44.624	Amphiprion_percula
ENSETEG00000001406	-	76	49.682	ENSATEG00000002182	smn1	51	47.059	Anabas_testudineus
ENSETEG00000001406	-	95	53.807	ENSACAG00000010017	-	68	51.813	Anolis_carolinensis
ENSETEG00000001406	-	100	67.143	ENSANAG00000032133	-	71	67.143	Aotus_nancymaae
ENSETEG00000001406	-	75	48.148	ENSACLG00000007308	smn1	53	48.718	Astatotilapia_calliptera
ENSETEG00000001406	-	61	54.400	ENSAMXG00000013884	smn1	62	44.633	Astyanax_mexicanus
ENSETEG00000001406	-	96	69.347	ENSBTAG00000005743	SMN2	70	67.647	Bos_taurus
ENSETEG00000001406	-	89	69.022	ENSCJAG00000016290	-	80	69.048	Callithrix_jacchus
ENSETEG00000001406	-	100	72.947	ENSCAFG00000007812	SMN	72	72.947	Canis_familiaris
ENSETEG00000001406	-	100	72.947	ENSCAFG00020019229	-	67	72.947	Canis_lupus_dingo
ENSETEG00000001406	-	96	70.352	ENSCHIG00000015559	-	71	67.453	Capra_hircus
ENSETEG00000001406	-	93	71.354	ENSTSYG00000012058	-	80	72.464	Carlito_syrichta
ENSETEG00000001406	-	65	63.704	ENSCAPG00000011021	-	54	71.667	Cavia_aperea
ENSETEG00000001406	-	93	64.500	ENSCPOG00000012328	-	72	65.278	Cavia_porcellus
ENSETEG00000001406	-	93	65.641	ENSCPOG00000036973	-	72	66.351	Cavia_porcellus
ENSETEG00000001406	-	89	69.022	ENSCCAG00000018127	-	80	69.048	Cebus_capucinus
ENSETEG00000001406	-	89	70.109	ENSCATG00000037002	-	80	70.000	Cercocebus_atys
ENSETEG00000001406	-	89	63.212	ENSCLAG00000000284	-	81	64.651	Chinchilla_lanigera
ENSETEG00000001406	-	89	70.652	ENSCSAG00000015688	-	71	70.476	Chlorocebus_sabaeus
ENSETEG00000001406	-	81	72.024	ENSCHOG00000007346	-	73	73.224	Choloepus_hoffmanni
ENSETEG00000001406	-	93	54.124	ENSCPBG00000010968	-	70	55.191	Chrysemys_picta_bellii
ENSETEG00000001406	-	100	61.905	ENSCANG00000033324	-	80	61.905	Colobus_angolensis_palliatus
ENSETEG00000001406	-	89	70.109	ENSCANG00000038242	-	80	70.000	Colobus_angolensis_palliatus
ENSETEG00000001406	-	93	48.168	ENSCGRG00001016998	-	66	50.485	Cricetulus_griseus_chok1gshd
ENSETEG00000001406	-	93	68.586	ENSCGRG00001017959	-	71	69.903	Cricetulus_griseus_chok1gshd
ENSETEG00000001406	-	93	68.586	ENSCGRG00000007698	Smn1	71	69.903	Cricetulus_griseus_crigri
ENSETEG00000001406	-	93	41.624	ENSCSEG00000015227	smn1	58	47.059	Cynoglossus_semilaevis
ENSETEG00000001406	-	75	46.914	ENSCVAG00000007498	smn1	58	46.154	Cyprinodon_variegatus
ENSETEG00000001406	-	76	49.057	ENSDARG00000018494	smn1	55	50.932	Danio_rerio
ENSETEG00000001406	-	100	60.386	ENSDNOG00000045949	-	87	60.386	Dasypus_novemcinctus
ENSETEG00000001406	-	70	70.139	ENSDNOG00000007283	-	66	71.698	Dasypus_novemcinctus
ENSETEG00000001406	-	88	59.563	ENSDORG00000007082	Smn1	72	61.905	Dipodomys_ordii
ENSETEG00000001406	-	93	60.622	ENSEASG00005018000	-	72	62.019	Equus_asinus_asinus
ENSETEG00000001406	-	93	71.875	ENSECAG00000015215	-	71	72.464	Equus_caballus
ENSETEG00000001406	-	81	67.262	ENSEEUG00000015777	-	74	68.852	Erinaceus_europaeus
ENSETEG00000001406	-	93	44.724	ENSELUG00000018067	smn1	63	44.693	Esox_lucius
ENSETEG00000001406	-	93	71.354	ENSFCAG00000028292	SMN	80	71.498	Felis_catus
ENSETEG00000001406	-	79	53.614	ENSFALG00000012320	-	65	53.261	Ficedula_albicollis
ENSETEG00000001406	-	100	61.860	ENSFDAG00000017683	-	73	65.581	Fukomys_damarensis
ENSETEG00000001406	-	84	42.391	ENSGMOG00000017279	smn1	63	42.391	Gadus_morhua
ENSETEG00000001406	-	90	51.852	ENSGALG00000002430	SMN	63	53.448	Gallus_gallus
ENSETEG00000001406	-	87	46.369	ENSGAFG00000009501	smn1	59	50.641	Gambusia_affinis
ENSETEG00000001406	-	92	47.179	ENSGACG00000010584	smn1	57	48.466	Gasterosteus_aculeatus
ENSETEG00000001406	-	87	37.736	ENSGAGG00000013639	-	54	57.895	Gopherus_agassizii
ENSETEG00000001406	-	92	54.167	ENSGAGG00000011374	-	68	54.167	Gopherus_agassizii
ENSETEG00000001406	-	89	70.109	ENSGGOG00000026704	-	98	70.000	Gorilla_gorilla
ENSETEG00000001406	-	89	70.109	ENSGGOG00000003872	-	85	70.000	Gorilla_gorilla
ENSETEG00000001406	-	83	45.405	ENSHBUG00000013987	smn1	63	45.810	Haplochromis_burtoni
ENSETEG00000001406	-	100	62.791	ENSHGLG00000001018	-	72	65.116	Heterocephalus_glaber_female
ENSETEG00000001406	-	100	65.238	ENSHGLG00000001905	-	72	65.238	Heterocephalus_glaber_female
ENSETEG00000001406	-	100	62.791	ENSHGLG00100011252	-	72	65.116	Heterocephalus_glaber_male
ENSETEG00000001406	-	100	65.238	ENSHGLG00100018676	-	75	65.238	Heterocephalus_glaber_male
ENSETEG00000001406	-	91	44.149	ENSHCOG00000017136	smn1	57	44.767	Hippocampus_comes
ENSETEG00000001406	-	88	69.231	ENSSTOG00000012288	-	76	70.476	Ictidomys_tridecemlineatus
ENSETEG00000001406	-	84	58.382	ENSJJAG00000014853	-	100	58.947	Jaculus_jaculus
ENSETEG00000001406	-	81	45.238	ENSKMAG00000007239	smn1	58	43.529	Kryptolebias_marmoratus
ENSETEG00000001406	-	90	46.196	ENSLBEG00000022550	smn1	58	48.824	Labrus_bergylta
ENSETEG00000001406	-	71	41.611	ENSLACG00000009808	-	59	39.362	Latimeria_chalumnae
ENSETEG00000001406	-	88	46.448	ENSLOCG00000011339	smn1	65	47.093	Lepisosteus_oculatus
ENSETEG00000001406	-	92	76.410	ENSLAFG00000003425	-	76	77.778	Loxodonta_africana
ENSETEG00000001406	-	89	66.304	ENSMFAG00000008812	-	71	66.667	Macaca_fascicularis
ENSETEG00000001406	-	89	70.652	ENSMFAG00000031523	SMN1	80	70.476	Macaca_fascicularis
ENSETEG00000001406	-	89	65.761	ENSMMUG00000030594	-	71	66.190	Macaca_mulatta
ENSETEG00000001406	-	89	70.652	ENSMMUG00000020214	SMN1	80	70.476	Macaca_mulatta
ENSETEG00000001406	-	89	70.652	ENSMNEG00000035094	-	80	70.476	Macaca_nemestrina
ENSETEG00000001406	-	89	70.109	ENSMLEG00000041902	-	80	70.000	Mandrillus_leucophaeus
ENSETEG00000001406	-	89	47.895	ENSMAMG00000011034	smn1	58	48.521	Mastacembelus_armatus
ENSETEG00000001406	-	89	45.312	ENSMZEG00005013634	smn1	54	48.718	Maylandia_zebra
ENSETEG00000001406	-	93	67.539	ENSMAUG00000010262	Smn1	71	68.932	Mesocricetus_auratus
ENSETEG00000001406	-	96	70.854	ENSMICG00000034708	-	93	70.952	Microcebus_murinus
ENSETEG00000001406	-	93	67.016	ENSMOCG00000017833	Smn1	71	68.447	Microtus_ochrogaster
ENSETEG00000001406	-	91	44.792	ENSMMOG00000005504	smn1	68	43.956	Mola_mola
ENSETEG00000001406	-	90	60.847	ENSMODG00000001436	-	66	60.847	Monodelphis_domestica
ENSETEG00000001406	-	87	45.699	ENSMALG00000008025	smn1	61	44.828	Monopterus_albus
ENSETEG00000001406	-	93	67.539	MGP_CAROLIEiJ_G0018836	Smn1	72	73.729	Mus_caroli
ENSETEG00000001406	-	93	67.539	ENSMUSG00000021645	Smn1	72	73.729	Mus_musculus
ENSETEG00000001406	-	100	66.505	MGP_PahariEiJ_G0015911	Smn1	73	69.492	Mus_pahari
ENSETEG00000001406	-	93	67.539	MGP_SPRETEiJ_G0019718	Smn1	72	73.729	Mus_spretus
ENSETEG00000001406	-	93	74.093	ENSMPUG00000014470	-	74	75.000	Mustela_putorius_furo
ENSETEG00000001406	-	96	72.362	ENSMLUG00000010603	-	67	72.727	Myotis_lucifugus
ENSETEG00000001406	-	100	68.447	ENSNGAG00000019833	Smn1	71	68.447	Nannospalax_galili
ENSETEG00000001406	-	89	45.833	ENSNBRG00000023000	smn1	54	49.359	Neolamprologus_brichardi
ENSETEG00000001406	-	93	69.744	ENSNLEG00000004454	-	80	70.000	Nomascus_leucogenys
ENSETEG00000001406	-	70	53.103	ENSMEUG00000011393	-	65	53.472	Notamacropus_eugenii
ENSETEG00000001406	-	81	64.881	ENSOPRG00000002015	-	71	64.804	Ochotona_princeps
ENSETEG00000001406	-	89	65.946	ENSODEG00000015976	-	73	67.150	Octodon_degus
ENSETEG00000001406	-	90	45.361	ENSONIG00000011799	smn1	63	44.444	Oreochromis_niloticus
ENSETEG00000001406	-	92	54.404	ENSOANG00000001626	-	68	54.404	Ornithorhynchus_anatinus
ENSETEG00000001406	-	93	60.622	ENSOCUG00000025183	-	68	62.981	Oryctolagus_cuniculus
ENSETEG00000001406	-	93	67.172	ENSOCUG00000026649	-	74	68.545	Oryctolagus_cuniculus
ENSETEG00000001406	-	93	70.984	ENSOCUG00000017097	-	73	72.596	Oryctolagus_cuniculus
ENSETEG00000001406	-	75	51.899	ENSORLG00000010552	smn1	54	50.000	Oryzias_latipes
ENSETEG00000001406	-	75	49.682	ENSORLG00020007936	smn1	59	49.682	Oryzias_latipes_hni
ENSETEG00000001406	-	75	52.229	ENSORLG00015022425	smn1	54	52.229	Oryzias_latipes_hsok
ENSETEG00000001406	-	86	47.778	ENSOMEG00000007824	smn1	58	49.405	Oryzias_melastigma
ENSETEG00000001406	-	96	61.500	ENSOGAG00000031414	-	75	59.908	Otolemur_garnettii
ENSETEG00000001406	-	93	68.063	ENSOARG00000005425	-	69	65.445	Ovis_aries
ENSETEG00000001406	-	89	69.565	ENSPPAG00000036640	-	80	69.524	Pan_paniscus
ENSETEG00000001406	-	93	71.354	ENSPPRG00000005575	-	80	71.981	Panthera_pardus
ENSETEG00000001406	-	93	71.354	ENSPTIG00000007745	-	80	71.981	Panthera_tigris_altaica
ENSETEG00000001406	-	89	70.109	ENSPTRG00000016955	-	80	70.000	Pan_troglodytes
ENSETEG00000001406	-	93	70.256	ENSPANG00000013601	-	80	70.476	Papio_anubis
ENSETEG00000001406	-	89	66.848	ENSPANG00000000253	-	75	66.190	Papio_anubis
ENSETEG00000001406	-	89	46.114	ENSPKIG00000011096	smn1	66	47.953	Paramormyrops_kingsleyae
ENSETEG00000001406	-	84	57.386	ENSPSIG00000014787	-	56	55.294	Pelodiscus_sinensis
ENSETEG00000001406	-	83	44.318	ENSPMGG00000012285	smn1	63	44.828	Periophthalmus_magnuspinnatus
ENSETEG00000001406	-	57	46.281	ENSPMAG00000000277	-	96	44.628	Petromyzon_marinus
ENSETEG00000001406	-	90	60.638	ENSPCIG00000025764	-	66	60.638	Phascolarctos_cinereus
ENSETEG00000001406	-	86	47.486	ENSPFOG00000007786	smn1	66	46.354	Poecilia_formosa
ENSETEG00000001406	-	86	48.045	ENSPLAG00000012071	smn1	73	46.875	Poecilia_latipinna
ENSETEG00000001406	-	86	47.486	ENSPMEG00000017085	smn1	73	46.354	Poecilia_mexicana
ENSETEG00000001406	-	87	48.045	ENSPREG00000005824	smn1	63	50.000	Poecilia_reticulata
ENSETEG00000001406	-	82	67.647	ENSPPYG00000015533	-	67	68.108	Pongo_abelii
ENSETEG00000001406	-	72	56.164	ENSPPYG00000019189	-	75	52.740	Pongo_abelii
ENSETEG00000001406	-	89	70.213	ENSPCAG00000004187	-	70	70.213	Procavia_capensis
ENSETEG00000001406	-	84	71.839	ENSPCOG00000022307	-	79	71.839	Propithecus_coquereli
ENSETEG00000001406	-	88	72.131	ENSPVAG00000005977	-	72	73.333	Pteropus_vampyrus
ENSETEG00000001406	-	89	45.833	ENSPNYG00000014148	smn1	54	49.359	Pundamilia_nyererei
ENSETEG00000001406	-	93	67.539	ENSRNOG00000018067	Smn1	71	67.961	Rattus_norvegicus
ENSETEG00000001406	-	89	70.109	ENSRBIG00000037052	-	80	70.000	Rhinopithecus_bieti
ENSETEG00000001406	-	98	64.356	ENSRBIG00000036775	-	74	64.356	Rhinopithecus_bieti
ENSETEG00000001406	-	89	70.109	ENSRROG00000039399	-	80	70.000	Rhinopithecus_roxellana
ENSETEG00000001406	-	90	66.129	ENSRROG00000031088	-	76	62.562	Rhinopithecus_roxellana
ENSETEG00000001406	-	82	64.497	ENSSBOG00000020112	-	64	65.217	Saimiri_boliviensis_boliviensis
ENSETEG00000001406	-	89	68.478	ENSSBOG00000011665	-	80	68.571	Saimiri_boliviensis_boliviensis
ENSETEG00000001406	-	93	61.026	ENSSHAG00000001499	-	66	61.026	Sarcophilus_harrisii
ENSETEG00000001406	-	75	49.359	ENSSFOG00015015507	smn1	59	49.045	Scleropages_formosus
ENSETEG00000001406	-	60	50.000	ENSSMAG00000007922	smn1	56	48.193	Scophthalmus_maximus
ENSETEG00000001406	-	89	44.444	ENSSDUG00000018533	smn1	58	46.108	Seriola_dumerili
ENSETEG00000001406	-	89	45.789	ENSSLDG00000021135	smn1	58	47.619	Seriola_lalandi_dorsalis
ENSETEG00000001406	-	93	53.368	ENSSPUG00000000373	-	67	53.368	Sphenodon_punctatus
ENSETEG00000001406	-	91	45.833	ENSSPAG00000004345	smn1	69	43.011	Stegastes_partitus
ENSETEG00000001406	-	57	44.915	ENSSSCG00000033865	-	53	55.085	Sus_scrofa
ENSETEG00000001406	-	89	72.283	ENSSSCG00000016970	-	72	72.381	Sus_scrofa
ENSETEG00000001406	-	89	57.143	ENSSSCG00000029127	-	76	54.455	Sus_scrofa
ENSETEG00000001406	-	96	52.736	ENSTGUG00000001548	-	68	52.660	Taeniopygia_guttata
ENSETEG00000001406	-	78	50.311	ENSTRUG00000000736	smn	61	46.243	Takifugu_rubripes
ENSETEG00000001406	-	93	72.396	ENSTBEG00000002399	-	100	73.430	Tupaia_belangeri
ENSETEG00000001406	-	88	69.399	ENSTTRG00000005080	-	73	69.340	Tursiops_truncatus
ENSETEG00000001406	-	89	71.739	ENSUAMG00000024947	-	76	73.913	Ursus_americanus
ENSETEG00000001406	-	89	72.283	ENSUMAG00000007842	-	53	74.396	Ursus_maritimus
ENSETEG00000001406	-	75	70.513	ENSVPAG00000009887	-	61	70.238	Vicugna_pacos
ENSETEG00000001406	-	100	72.947	ENSVVUG00000006934	-	72	72.947	Vulpes_vulpes
ENSETEG00000001406	-	64	62.963	ENSXETG00000004912	-	77	62.963	Xenopus_tropicalis
ENSETEG00000001406	-	76	51.235	ENSXETG00000018189	smn2	55	52.439	Xenopus_tropicalis
ENSETEG00000001406	-	77	50.000	ENSXMAG00000001521	smn1	59	51.923	Xiphophorus_maculatus