EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSETEG00000001887 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 25042 bases
Position: chrGeneScaffold_855:2442-27483
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000001531	KH_1	PF00013.29	2.8e-11	1	1
ENSETEP00000001531	DEAD	PF00270.29	1.6e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000001886	-	1938	-	ENSETEP00000001531	645 (aa)	-	UPI0000E41BA0

Gene Model

Click here to download ENSETEG00000001887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000001887's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSETEG00000001887	-	51	51.534	ENSETEG00000014626	-	62	51.534
ENSETEG00000001887	-	60	49.618	ENSETEG00000019547	-	62	49.618

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000001887	-	81	88.462	ENSAMEG00000007851	-	80	88.462	Ailuropoda_melanoleuca
ENSETEG00000001887	-	81	86.905	ENSBTAG00000021814	-	80	86.905	Bos_taurus
ENSETEG00000001887	-	81	87.278	ENSCAFG00020010029	-	80	87.278	Canis_lupus_dingo
ENSETEG00000001887	-	75	86.391	ENSCAFG00020002717	-	80	86.391	Canis_lupus_dingo
ENSETEG00000001887	-	81	87.500	ENSCHIG00000017351	-	80	87.500	Capra_hircus
ENSETEG00000001887	-	53	88.791	ENSCAPG00000004247	-	76	88.791	Cavia_aperea
ENSETEG00000001887	-	81	88.791	ENSCPOG00000003991	-	80	88.791	Cavia_porcellus
ENSETEG00000001887	-	76	87.748	ENSCLAG00000010261	-	79	87.748	Chinchilla_lanigera
ENSETEG00000001887	-	61	80.826	ENSCHOG00000003450	-	70	80.826	Choloepus_hoffmanni
ENSETEG00000001887	-	81	89.941	ENSCGRG00001001145	Ddx43	80	89.941	Cricetulus_griseus_chok1gshd
ENSETEG00000001887	-	68	89.645	ENSCGRG00000010217	Ddx43	77	89.645	Cricetulus_griseus_crigri
ENSETEG00000001887	-	81	92.647	ENSDNOG00000017589	-	80	92.647	Dasypus_novemcinctus
ENSETEG00000001887	-	81	91.150	ENSDORG00000030010	Ddx43	80	91.150	Dipodomys_ordii
ENSETEG00000001887	-	81	92.625	ENSEASG00005004346	-	71	92.625	Equus_asinus_asinus
ENSETEG00000001887	-	81	92.625	ENSECAG00000017971	DDX43	78	92.625	Equus_caballus
ENSETEG00000001887	-	81	85.546	ENSFCAG00000031631	-	80	85.546	Felis_catus
ENSETEG00000001887	-	68	86.726	ENSHGLG00000001118	-	77	86.726	Heterocephalus_glaber_female
ENSETEG00000001887	-	71	86.726	ENSHGLG00100011895	-	71	86.726	Heterocephalus_glaber_male
ENSETEG00000001887	-	62	82.119	ENSSTOG00000032538	-	74	82.119	Ictidomys_tridecemlineatus
ENSETEG00000001887	-	81	89.381	ENSJJAG00000014184	Ddx43	80	89.381	Jaculus_jaculus
ENSETEG00000001887	-	74	94.985	ENSLAFG00000012755	-	78	94.985	Loxodonta_africana
ENSETEG00000001887	-	81	90.828	ENSMAUG00000001441	Ddx43	80	90.828	Mesocricetus_auratus
ENSETEG00000001887	-	81	88.791	ENSMOCG00000012956	Ddx43	80	88.791	Microtus_ochrogaster
ENSETEG00000001887	-	81	90.560	MGP_CAROLIEiJ_G0032467	Ddx43	80	90.560	Mus_caroli
ENSETEG00000001887	-	81	90.265	ENSMUSG00000070291	Ddx43	80	90.265	Mus_musculus
ENSETEG00000001887	-	81	89.381	MGP_PahariEiJ_G0015333	Ddx43	78	89.381	Mus_pahari
ENSETEG00000001887	-	81	90.265	MGP_SPRETEiJ_G0033607	Ddx43	80	90.265	Mus_spretus
ENSETEG00000001887	-	81	89.086	ENSMPUG00000004342	-	80	89.086	Mustela_putorius_furo
ENSETEG00000001887	-	81	90.265	ENSMLUG00000017604	-	80	90.265	Myotis_lucifugus
ENSETEG00000001887	-	81	89.381	ENSNGAG00000015102	Ddx43	80	89.381	Nannospalax_galili
ENSETEG00000001887	-	65	86.391	ENSODEG00000016207	-	76	86.391	Octodon_degus
ENSETEG00000001887	-	72	79.692	ENSOCUG00000025811	-	71	79.692	Oryctolagus_cuniculus
ENSETEG00000001887	-	71	86.431	ENSOCUG00000006338	-	70	86.431	Oryctolagus_cuniculus
ENSETEG00000001887	-	81	87.500	ENSOARG00000010873	-	80	87.500	Ovis_aries
ENSETEG00000001887	-	81	86.136	ENSPTIG00000017842	-	80	86.136	Panthera_tigris_altaica
ENSETEG00000001887	-	68	90.265	ENSPEMG00000023986	Ddx43	77	90.265	Peromyscus_maniculatus_bairdii
ENSETEG00000001887	-	80	95.000	ENSPCAG00000005962	-	80	95.000	Procavia_capensis
ENSETEG00000001887	-	68	91.740	ENSPVAG00000012718	-	77	91.740	Pteropus_vampyrus
ENSETEG00000001887	-	81	89.971	ENSRNOG00000050868	Ddx43	80	89.971	Rattus_norvegicus
ENSETEG00000001887	-	65	91.176	ENSSARG00000013493	-	76	91.176	Sorex_araneus
ENSETEG00000001887	-	81	87.798	ENSSSCG00000004287	-	83	87.798	Sus_scrofa
ENSETEG00000001887	-	67	77.545	ENSTTRG00000001488	-	76	77.545	Tursiops_truncatus
ENSETEG00000001887	-	64	90.393	ENSUAMG00000012894	-	63	90.393	Ursus_americanus
ENSETEG00000001887	-	81	88.496	ENSUMAG00000012291	-	80	88.496	Ursus_maritimus
ENSETEG00000001887	-	75	77.027	ENSVPAG00000004969	-	78	77.027	Vicugna_pacos
ENSETEG00000001887	-	81	87.278	ENSVVUG00000013908	-	80	87.278	Vulpes_vulpes