EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000001988 (Gene tree)
Gene ID: -
Gene Symbol: RTCB
Alias: C22orf28|FAAP|HSPC117
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 17128 bases
Position: chrGeneScaffold_1290:35847-52974
Accession: 26935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000001609	RtcB	PF01139.17	2.9e-135	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000001987	RTCB-201	1518	-	ENSETEP00000001609	505 (aa)	-	UPI0000E41057

Gene Model

Click here to download ENSETEG00000001988's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000001988's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000001988	RTCB	100	92.673	ENSG00000100220	RTCB	100	92.673	Homo_sapiens
ENSETEG00000001988	RTCB	100	88.317	ENSAPOG00000006040	rtcb	100	88.317	Acanthochromis_polyacanthus
ENSETEG00000001988	RTCB	100	92.475	ENSAMEG00000016152	RTCB	100	92.475	Ailuropoda_melanoleuca
ENSETEG00000001988	RTCB	100	83.960	ENSACIG00000009083	rtcb	100	83.960	Amphilophus_citrinellus
ENSETEG00000001988	RTCB	100	88.515	ENSAOCG00000005662	rtcb	100	88.696	Amphiprion_ocellaris
ENSETEG00000001988	RTCB	100	88.515	ENSAPEG00000024701	rtcb	100	88.515	Amphiprion_percula
ENSETEG00000001988	RTCB	96	83.573	ENSAPEG00000024653	rtcb	100	83.573	Amphiprion_percula
ENSETEG00000001988	RTCB	100	88.911	ENSATEG00000000618	rtcb	100	88.911	Anabas_testudineus
ENSETEG00000001988	RTCB	100	88.054	ENSACAG00000014817	RTCB	100	88.054	Anolis_carolinensis
ENSETEG00000001988	RTCB	100	79.406	ENSANAG00000018191	-	91	79.406	Aotus_nancymaae
ENSETEG00000001988	RTCB	72	97.222	ENSANAG00000023724	-	84	97.222	Aotus_nancymaae
ENSETEG00000001988	RTCB	100	87.525	ENSACLG00000008367	rtcb	100	88.043	Astatotilapia_calliptera
ENSETEG00000001988	RTCB	100	88.515	ENSAMXG00000042320	rtcb	100	88.515	Astyanax_mexicanus
ENSETEG00000001988	RTCB	100	92.673	ENSBTAG00000011070	RTCB	100	92.673	Bos_taurus
ENSETEG00000001988	RTCB	100	69.307	WBGene00008877	rtcb-1	100	69.307	Caenorhabditis_elegans
ENSETEG00000001988	RTCB	100	92.673	ENSCJAG00000006128	RTCB	100	92.673	Callithrix_jacchus
ENSETEG00000001988	RTCB	100	88.119	ENSCAFG00000010789	-	100	88.119	Canis_familiaris
ENSETEG00000001988	RTCB	100	92.475	ENSCAFG00000001785	RTCB	100	92.475	Canis_familiaris
ENSETEG00000001988	RTCB	87	87.727	ENSCAFG00020018953	-	99	87.727	Canis_lupus_dingo
ENSETEG00000001988	RTCB	100	92.475	ENSCAFG00020004890	-	100	92.475	Canis_lupus_dingo
ENSETEG00000001988	RTCB	100	92.871	ENSCHIG00000027009	-	100	92.871	Capra_hircus
ENSETEG00000001988	RTCB	100	92.277	ENSTSYG00000012320	RTCB	100	92.277	Carlito_syrichta
ENSETEG00000001988	RTCB	94	92.034	ENSCAPG00000011647	RTCB	96	92.034	Cavia_aperea
ENSETEG00000001988	RTCB	100	92.673	ENSCCAG00000000618	RTCB	100	92.673	Cebus_capucinus
ENSETEG00000001988	RTCB	100	92.277	ENSCATG00000033424	RTCB	100	92.277	Cercocebus_atys
ENSETEG00000001988	RTCB	100	92.475	ENSCLAG00000007997	RTCB	100	92.475	Chinchilla_lanigera
ENSETEG00000001988	RTCB	100	92.475	ENSCSAG00000008351	RTCB	100	92.475	Chlorocebus_sabaeus
ENSETEG00000001988	RTCB	100	78.416	ENSCHOG00000009123	RTCB	100	78.416	Choloepus_hoffmanni
ENSETEG00000001988	RTCB	100	89.901	ENSCPBG00000023184	RTCB	100	89.901	Chrysemys_picta_bellii
ENSETEG00000001988	RTCB	100	77.030	ENSCING00000003830	-	100	77.030	Ciona_intestinalis
ENSETEG00000001988	RTCB	100	77.426	ENSCSAVG00000008124	-	99	77.426	Ciona_savignyi
ENSETEG00000001988	RTCB	100	88.515	ENSCANG00000001891	RTCB	100	88.515	Colobus_angolensis_palliatus
ENSETEG00000001988	RTCB	100	92.079	ENSCGRG00001011173	Rtcb	100	92.079	Cricetulus_griseus_chok1gshd
ENSETEG00000001988	RTCB	93	92.144	ENSCGRG00000009587	-	96	92.144	Cricetulus_griseus_crigri
ENSETEG00000001988	RTCB	100	88.119	ENSCSEG00000003986	rtcb	100	88.119	Cynoglossus_semilaevis
ENSETEG00000001988	RTCB	82	86.058	ENSCVAG00000000569	rtcb	95	86.058	Cyprinodon_variegatus
ENSETEG00000001988	RTCB	100	88.515	ENSDARG00000101047	rtcb	100	88.515	Danio_rerio
ENSETEG00000001988	RTCB	72	98.347	ENSDNOG00000012425	RTCB	89	98.347	Dasypus_novemcinctus
ENSETEG00000001988	RTCB	100	92.079	ENSDORG00000010855	Rtcb	100	92.079	Dipodomys_ordii
ENSETEG00000001988	RTCB	99	80.119	FBgn0032781	RtcB	99	80.119	Drosophila_melanogaster
ENSETEG00000001988	RTCB	100	84.554	ENSEBUG00000014235	rtcb	100	84.554	Eptatretus_burgeri
ENSETEG00000001988	RTCB	100	92.475	ENSEASG00005019059	RTCB	100	92.475	Equus_asinus_asinus
ENSETEG00000001988	RTCB	100	92.475	ENSECAG00000023998	RTCB	100	92.475	Equus_caballus
ENSETEG00000001988	RTCB	89	82.774	ENSEEUG00000006251	RTCB	100	82.774	Erinaceus_europaeus
ENSETEG00000001988	RTCB	100	82.136	ENSELUG00000009275	rtcb	100	82.136	Esox_lucius
ENSETEG00000001988	RTCB	100	92.673	ENSFCAG00000026480	RTCB	100	92.673	Felis_catus
ENSETEG00000001988	RTCB	100	90.891	ENSFALG00000013334	RTCB	100	90.891	Ficedula_albicollis
ENSETEG00000001988	RTCB	100	92.475	ENSFDAG00000018150	RTCB	100	92.475	Fukomys_damarensis
ENSETEG00000001988	RTCB	100	88.317	ENSFHEG00000009595	rtcb	100	88.317	Fundulus_heteroclitus
ENSETEG00000001988	RTCB	100	85.941	ENSGMOG00000018882	rtcb	100	85.941	Gadus_morhua
ENSETEG00000001988	RTCB	100	90.693	ENSGALG00000012611	RTCB	100	90.693	Gallus_gallus
ENSETEG00000001988	RTCB	100	88.713	ENSGAFG00000004198	rtcb	100	88.713	Gambusia_affinis
ENSETEG00000001988	RTCB	100	87.723	ENSGACG00000000586	rtcb	100	87.723	Gasterosteus_aculeatus
ENSETEG00000001988	RTCB	93	88.723	ENSGAGG00000019133	RTCB	98	88.723	Gopherus_agassizii
ENSETEG00000001988	RTCB	100	92.673	ENSGGOG00000011402	RTCB	100	92.673	Gorilla_gorilla
ENSETEG00000001988	RTCB	100	87.525	ENSHBUG00000020571	rtcb	100	87.525	Haplochromis_burtoni
ENSETEG00000001988	RTCB	93	64.619	ENSHGLG00000001066	-	99	64.619	Heterocephalus_glaber_female
ENSETEG00000001988	RTCB	100	92.475	ENSHGLG00000004492	RTCB	100	92.475	Heterocephalus_glaber_female
ENSETEG00000001988	RTCB	100	92.475	ENSHGLG00100008965	RTCB	100	92.475	Heterocephalus_glaber_male
ENSETEG00000001988	RTCB	100	85.602	ENSHCOG00000006450	rtcb	100	85.602	Hippocampus_comes
ENSETEG00000001988	RTCB	100	88.317	ENSIPUG00000015443	rtcb	100	88.317	Ictalurus_punctatus
ENSETEG00000001988	RTCB	100	92.673	ENSSTOG00000003878	RTCB	100	92.673	Ictidomys_tridecemlineatus
ENSETEG00000001988	RTCB	100	91.683	ENSJJAG00000010667	Rtcb	100	91.683	Jaculus_jaculus
ENSETEG00000001988	RTCB	100	88.317	ENSKMAG00000013178	rtcb	100	88.317	Kryptolebias_marmoratus
ENSETEG00000001988	RTCB	100	88.515	ENSLBEG00000010566	RTCB	100	88.515	Labrus_bergylta
ENSETEG00000001988	RTCB	100	87.525	ENSLBEG00000000214	rtcb	100	87.525	Labrus_bergylta
ENSETEG00000001988	RTCB	100	88.713	ENSLACG00000013033	RTCB	100	88.713	Latimeria_chalumnae
ENSETEG00000001988	RTCB	100	88.317	ENSLOCG00000016515	rtcb	99	88.317	Lepisosteus_oculatus
ENSETEG00000001988	RTCB	100	92.079	ENSLAFG00000002082	RTCB	100	92.079	Loxodonta_africana
ENSETEG00000001988	RTCB	100	92.475	ENSMFAG00000034419	RTCB	100	92.475	Macaca_fascicularis
ENSETEG00000001988	RTCB	100	92.475	ENSMMUG00000006720	RTCB	100	92.475	Macaca_mulatta
ENSETEG00000001988	RTCB	100	92.475	ENSMNEG00000040669	RTCB	100	92.475	Macaca_nemestrina
ENSETEG00000001988	RTCB	100	92.277	ENSMLEG00000040505	RTCB	100	92.277	Mandrillus_leucophaeus
ENSETEG00000001988	RTCB	100	88.515	ENSMAMG00000020676	rtcb	100	88.515	Mastacembelus_armatus
ENSETEG00000001988	RTCB	100	87.525	ENSMZEG00005018942	rtcb	100	87.525	Maylandia_zebra
ENSETEG00000001988	RTCB	100	90.335	ENSMGAG00000012805	RTCB	100	90.335	Meleagris_gallopavo
ENSETEG00000001988	RTCB	59	100.000	ENSMAUG00000008301	Rtcb	100	100.000	Mesocricetus_auratus
ENSETEG00000001988	RTCB	100	74.257	ENSMICG00000036677	-	100	74.257	Microcebus_murinus
ENSETEG00000001988	RTCB	100	92.871	ENSMICG00000013303	-	100	92.871	Microcebus_murinus
ENSETEG00000001988	RTCB	100	92.079	ENSMOCG00000002440	Rtcb	100	92.079	Microtus_ochrogaster
ENSETEG00000001988	RTCB	100	88.911	ENSMMOG00000005987	rtcb	100	88.911	Mola_mola
ENSETEG00000001988	RTCB	100	91.485	ENSMODG00000001414	RTCB	100	91.485	Monodelphis_domestica
ENSETEG00000001988	RTCB	100	88.911	ENSMALG00000007603	rtcb	100	88.911	Monopterus_albus
ENSETEG00000001988	RTCB	100	92.475	MGP_CAROLIEiJ_G0015689	Rtcb	100	92.475	Mus_caroli
ENSETEG00000001988	RTCB	100	92.475	ENSMUSG00000001783	Rtcb	100	92.475	Mus_musculus
ENSETEG00000001988	RTCB	100	92.475	MGP_PahariEiJ_G0031396	Rtcb	100	92.475	Mus_pahari
ENSETEG00000001988	RTCB	100	92.475	MGP_SPRETEiJ_G0016507	Rtcb	100	92.475	Mus_spretus
ENSETEG00000001988	RTCB	100	92.475	ENSMPUG00000012285	RTCB	100	92.475	Mustela_putorius_furo
ENSETEG00000001988	RTCB	100	90.335	ENSMLUG00000007803	RTCB	100	90.335	Myotis_lucifugus
ENSETEG00000001988	RTCB	72	100.000	ENSNGAG00000005093	Rtcb	100	100.000	Nannospalax_galili
ENSETEG00000001988	RTCB	100	87.723	ENSNBRG00000017202	rtcb	100	87.723	Neolamprologus_brichardi
ENSETEG00000001988	RTCB	100	92.673	ENSNLEG00000004960	RTCB	100	92.673	Nomascus_leucogenys
ENSETEG00000001988	RTCB	100	78.218	ENSMEUG00000007809	-	100	78.218	Notamacropus_eugenii
ENSETEG00000001988	RTCB	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSETEG00000001988	RTCB	100	60.594	ENSODEG00000005042	-	100	60.594	Octodon_degus
ENSETEG00000001988	RTCB	82	100.000	ENSODEG00000013033	-	100	100.000	Octodon_degus
ENSETEG00000001988	RTCB	100	88.119	ENSONIG00000007474	rtcb	100	88.119	Oreochromis_niloticus
ENSETEG00000001988	RTCB	100	91.485	ENSOANG00000005524	RTCB	100	91.485	Ornithorhynchus_anatinus
ENSETEG00000001988	RTCB	93	92.128	ENSOCUG00000008270	RTCB	96	92.128	Oryctolagus_cuniculus
ENSETEG00000001988	RTCB	100	87.723	ENSORLG00000020093	rtcb	100	87.723	Oryzias_latipes
ENSETEG00000001988	RTCB	100	87.723	ENSORLG00020003706	rtcb	100	87.723	Oryzias_latipes_hni
ENSETEG00000001988	RTCB	100	87.921	ENSORLG00015002968	rtcb	100	87.921	Oryzias_latipes_hsok
ENSETEG00000001988	RTCB	100	87.525	ENSOMEG00000021278	rtcb	100	87.525	Oryzias_melastigma
ENSETEG00000001988	RTCB	100	92.277	ENSOGAG00000001425	RTCB	100	92.277	Otolemur_garnettii
ENSETEG00000001988	RTCB	100	92.871	ENSOARG00000018008	RTCB	100	92.871	Ovis_aries
ENSETEG00000001988	RTCB	100	92.673	ENSPPAG00000028667	RTCB	100	92.673	Pan_paniscus
ENSETEG00000001988	RTCB	100	92.673	ENSPPRG00000004038	RTCB	100	92.673	Panthera_pardus
ENSETEG00000001988	RTCB	94	88.000	ENSPTIG00000020499	RTCB	97	89.053	Panthera_tigris_altaica
ENSETEG00000001988	RTCB	100	92.673	ENSPTRG00000014287	RTCB	100	92.673	Pan_troglodytes
ENSETEG00000001988	RTCB	100	92.475	ENSPANG00000016035	RTCB	100	92.475	Papio_anubis
ENSETEG00000001988	RTCB	100	86.931	ENSPKIG00000001881	rtcb	100	86.931	Paramormyrops_kingsleyae
ENSETEG00000001988	RTCB	91	90.870	ENSPSIG00000011690	RTCB	100	90.870	Pelodiscus_sinensis
ENSETEG00000001988	RTCB	100	88.515	ENSPMGG00000016672	rtcb	100	88.515	Periophthalmus_magnuspinnatus
ENSETEG00000001988	RTCB	100	92.475	ENSPEMG00000019548	Rtcb	100	92.475	Peromyscus_maniculatus_bairdii
ENSETEG00000001988	RTCB	100	85.545	ENSPMAG00000005657	rtcb	100	85.545	Petromyzon_marinus
ENSETEG00000001988	RTCB	100	91.881	ENSPCIG00000009467	RTCB	100	91.881	Phascolarctos_cinereus
ENSETEG00000001988	RTCB	100	89.109	ENSPFOG00000003058	rtcb	100	89.109	Poecilia_formosa
ENSETEG00000001988	RTCB	100	88.911	ENSPLAG00000017663	rtcb	100	88.911	Poecilia_latipinna
ENSETEG00000001988	RTCB	100	89.109	ENSPMEG00000006227	rtcb	100	89.109	Poecilia_mexicana
ENSETEG00000001988	RTCB	100	88.911	ENSPREG00000018467	rtcb	100	88.911	Poecilia_reticulata
ENSETEG00000001988	RTCB	100	92.673	ENSPPYG00000011752	RTCB	100	92.673	Pongo_abelii
ENSETEG00000001988	RTCB	93	74.153	ENSPCAG00000013641	RTCB	100	74.153	Procavia_capensis
ENSETEG00000001988	RTCB	100	92.673	ENSPCOG00000017243	RTCB	100	92.673	Propithecus_coquereli
ENSETEG00000001988	RTCB	93	91.489	ENSPVAG00000002380	RTCB	100	91.489	Pteropus_vampyrus
ENSETEG00000001988	RTCB	100	87.525	ENSPNYG00000022760	rtcb	100	87.525	Pundamilia_nyererei
ENSETEG00000001988	RTCB	100	88.911	ENSPNAG00000009209	rtcb	100	88.911	Pygocentrus_nattereri
ENSETEG00000001988	RTCB	100	92.475	ENSRNOG00000004813	Rtcb	100	92.475	Rattus_norvegicus
ENSETEG00000001988	RTCB	100	83.399	ENSRBIG00000042090	RTCB	100	83.399	Rhinopithecus_bieti
ENSETEG00000001988	RTCB	100	88.119	ENSSBOG00000020085	-	100	88.119	Saimiri_boliviensis_boliviensis
ENSETEG00000001988	RTCB	94	92.405	ENSSHAG00000016277	RTCB	100	92.405	Sarcophilus_harrisii
ENSETEG00000001988	RTCB	100	87.921	ENSSFOG00015011572	RTCB	100	87.921	Scleropages_formosus
ENSETEG00000001988	RTCB	100	87.327	ENSSFOG00015000763	rtcb	100	87.327	Scleropages_formosus
ENSETEG00000001988	RTCB	100	85.545	ENSSMAG00000005096	rtcb	100	85.545	Scophthalmus_maximus
ENSETEG00000001988	RTCB	100	87.921	ENSSDUG00000012605	rtcb	100	87.921	Seriola_dumerili
ENSETEG00000001988	RTCB	100	87.921	ENSSLDG00000019458	rtcb	100	87.921	Seriola_lalandi_dorsalis
ENSETEG00000001988	RTCB	66	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSETEG00000001988	RTCB	100	89.505	ENSSPUG00000012814	RTCB	100	89.505	Sphenodon_punctatus
ENSETEG00000001988	RTCB	100	88.515	ENSSPAG00000004623	rtcb	100	88.515	Stegastes_partitus
ENSETEG00000001988	RTCB	100	92.673	ENSSSCG00000000158	RTCB	100	92.673	Sus_scrofa
ENSETEG00000001988	RTCB	100	90.891	ENSTGUG00000010947	RTCB	99	90.891	Taeniopygia_guttata
ENSETEG00000001988	RTCB	91	88.696	ENSTRUG00000009880	rtcb	100	89.759	Takifugu_rubripes
ENSETEG00000001988	RTCB	100	86.931	ENSTNIG00000002484	rtcb	100	86.931	Tetraodon_nigroviridis
ENSETEG00000001988	RTCB	87	100.000	ENSTBEG00000004418	RTCB	87	100.000	Tupaia_belangeri
ENSETEG00000001988	RTCB	93	91.702	ENSTTRG00000006417	RTCB	100	91.702	Tursiops_truncatus
ENSETEG00000001988	RTCB	100	92.475	ENSUAMG00000022792	RTCB	100	92.475	Ursus_americanus
ENSETEG00000001988	RTCB	100	92.475	ENSUMAG00000017225	RTCB	100	92.475	Ursus_maritimus
ENSETEG00000001988	RTCB	100	92.475	ENSVPAG00000005375	RTCB	100	92.475	Vicugna_pacos
ENSETEG00000001988	RTCB	100	92.475	ENSVVUG00000023408	RTCB	100	92.475	Vulpes_vulpes
ENSETEG00000001988	RTCB	100	88.911	ENSXETG00000011523	rtcb	100	88.911	Xenopus_tropicalis
ENSETEG00000001988	RTCB	100	89.109	ENSXMAG00000002855	rtcb	100	89.109	Xiphophorus_maculatus