EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000002469 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 5070 bases
Position: chrGeneScaffold_385:134812-139881
Accession: 101648844
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000002010	EXOSC1	PF10447.9	4.8e-15	1	1
ENSETEP00000002010	ECR1_N	PF14382.6	3.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000002468	-	588	XM_004701031	ENSETEP00000002010	195 (aa)	XP_004701088	UPI0000E43335

Gene Model

Click here to download ENSETEG00000002469's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000002469's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000002469	-	100	94.872	ENSG00000171311	EXOSC1	100	94.872	Homo_sapiens
ENSETEG00000002469	-	98	78.534	ENSAPOG00000007822	exosc1	98	78.534	Acanthochromis_polyacanthus
ENSETEG00000002469	-	100	95.897	ENSAMEG00000000129	EXOSC1	100	95.897	Ailuropoda_melanoleuca
ENSETEG00000002469	-	96	77.660	ENSACIG00000018956	exosc1	92	77.660	Amphilophus_citrinellus
ENSETEG00000002469	-	98	78.534	ENSAOCG00000010699	exosc1	98	78.534	Amphiprion_ocellaris
ENSETEG00000002469	-	92	68.715	ENSAPEG00000012690	exosc1	96	68.715	Amphiprion_percula
ENSETEG00000002469	-	98	78.010	ENSATEG00000018683	exosc1	98	78.010	Anabas_testudineus
ENSETEG00000002469	-	99	84.536	ENSACAG00000002101	EXOSC1	99	84.536	Anolis_carolinensis
ENSETEG00000002469	-	100	96.410	ENSANAG00000034669	EXOSC1	100	96.410	Aotus_nancymaae
ENSETEG00000002469	-	98	78.534	ENSACLG00000021243	exosc1	98	78.534	Astatotilapia_calliptera
ENSETEG00000002469	-	98	80.105	ENSAMXG00000011116	exosc1	98	80.105	Astyanax_mexicanus
ENSETEG00000002469	-	100	95.385	ENSBTAG00000012699	EXOSC1	100	95.385	Bos_taurus
ENSETEG00000002469	-	92	31.915	WBGene00012966	exos-1	90	31.915	Caenorhabditis_elegans
ENSETEG00000002469	-	100	96.923	ENSCJAG00000016586	EXOSC1	100	96.923	Callithrix_jacchus
ENSETEG00000002469	-	100	95.385	ENSCAFG00000009068	EXOSC1	94	95.385	Canis_familiaris
ENSETEG00000002469	-	100	95.385	ENSCAFG00020006002	EXOSC1	94	95.385	Canis_lupus_dingo
ENSETEG00000002469	-	100	95.385	ENSCHIG00000015253	EXOSC1	100	95.385	Capra_hircus
ENSETEG00000002469	-	100	95.897	ENSTSYG00000000760	EXOSC1	100	95.897	Carlito_syrichta
ENSETEG00000002469	-	100	96.410	ENSCPOG00000001173	EXOSC1	100	96.410	Cavia_porcellus
ENSETEG00000002469	-	100	55.330	ENSCCAG00000023986	EXOSC1	100	55.330	Cebus_capucinus
ENSETEG00000002469	-	100	94.872	ENSCATG00000034114	EXOSC1	100	94.872	Cercocebus_atys
ENSETEG00000002469	-	100	95.897	ENSCLAG00000002463	EXOSC1	100	95.897	Chinchilla_lanigera
ENSETEG00000002469	-	100	94.359	ENSCSAG00000005870	EXOSC1	100	94.359	Chlorocebus_sabaeus
ENSETEG00000002469	-	96	83.422	ENSCHOG00000006477	EXOSC1	100	83.422	Choloepus_hoffmanni
ENSETEG00000002469	-	54	81.132	ENSCPBG00000011949	EXOSC1	88	81.132	Chrysemys_picta_bellii
ENSETEG00000002469	-	95	54.545	ENSCING00000022734	-	89	54.545	Ciona_intestinalis
ENSETEG00000002469	-	95	56.150	ENSCSAVG00000010865	-	95	56.150	Ciona_savignyi
ENSETEG00000002469	-	100	94.872	ENSCANG00000034159	EXOSC1	100	94.872	Colobus_angolensis_palliatus
ENSETEG00000002469	-	100	96.410	ENSCGRG00001000335	Exosc1	100	96.410	Cricetulus_griseus_chok1gshd
ENSETEG00000002469	-	100	96.410	ENSCGRG00000011602	Exosc1	100	96.410	Cricetulus_griseus_crigri
ENSETEG00000002469	-	98	67.539	ENSCSEG00000007895	exosc1	95	67.539	Cynoglossus_semilaevis
ENSETEG00000002469	-	98	74.869	ENSCVAG00000016748	exosc1	98	74.869	Cyprinodon_variegatus
ENSETEG00000002469	-	98	79.058	ENSDARG00000059841	exosc1	98	79.058	Danio_rerio
ENSETEG00000002469	-	75	94.595	ENSDNOG00000007983	EXOSC1	100	94.595	Dasypus_novemcinctus
ENSETEG00000002469	-	100	94.872	ENSDORG00000016528	Exosc1	100	94.872	Dipodomys_ordii
ENSETEG00000002469	-	94	48.677	FBgn0032346	Csl4	92	48.677	Drosophila_melanogaster
ENSETEG00000002469	-	99	62.755	ENSEBUG00000008164	exosc1	98	62.755	Eptatretus_burgeri
ENSETEG00000002469	-	100	87.692	ENSEASG00005008684	EXOSC1	100	87.692	Equus_asinus_asinus
ENSETEG00000002469	-	61	77.311	ENSECAG00000010621	EXOSC1	71	77.311	Equus_caballus
ENSETEG00000002469	-	100	94.872	ENSEEUG00000005647	EXOSC1	100	94.872	Erinaceus_europaeus
ENSETEG00000002469	-	94	78.804	ENSELUG00000017369	exosc1	97	64.062	Esox_lucius
ENSETEG00000002469	-	100	95.897	ENSFCAG00000040563	EXOSC1	94	95.897	Felis_catus
ENSETEG00000002469	-	100	84.103	ENSFALG00000008450	EXOSC1	100	84.103	Ficedula_albicollis
ENSETEG00000002469	-	100	96.923	ENSFDAG00000000846	EXOSC1	100	96.923	Fukomys_damarensis
ENSETEG00000002469	-	98	74.869	ENSFHEG00000009154	exosc1	98	74.869	Fundulus_heteroclitus
ENSETEG00000002469	-	98	78.534	ENSGMOG00000008993	exosc1	98	78.534	Gadus_morhua
ENSETEG00000002469	-	100	73.333	ENSGALG00000039917	EXOSC1	100	87.671	Gallus_gallus
ENSETEG00000002469	-	98	74.869	ENSGAFG00000010265	exosc1	94	74.869	Gambusia_affinis
ENSETEG00000002469	-	98	79.058	ENSGACG00000018936	exosc1	98	79.058	Gasterosteus_aculeatus
ENSETEG00000002469	-	100	84.615	ENSGAGG00000019192	EXOSC1	100	84.615	Gopherus_agassizii
ENSETEG00000002469	-	100	83.590	ENSGGOG00000003099	EXOSC1	100	83.590	Gorilla_gorilla
ENSETEG00000002469	-	98	78.534	ENSHBUG00000017857	exosc1	98	78.534	Haplochromis_burtoni
ENSETEG00000002469	-	100	96.410	ENSHGLG00000016927	EXOSC1	100	96.410	Heterocephalus_glaber_female
ENSETEG00000002469	-	100	96.410	ENSHGLG00100012208	EXOSC1	100	96.410	Heterocephalus_glaber_male
ENSETEG00000002469	-	98	77.487	ENSHCOG00000019882	exosc1	98	77.487	Hippocampus_comes
ENSETEG00000002469	-	98	79.058	ENSIPUG00000007685	exosc1	98	79.058	Ictalurus_punctatus
ENSETEG00000002469	-	63	78.689	ENSSTOG00000029860	-	93	78.689	Ictidomys_tridecemlineatus
ENSETEG00000002469	-	100	95.897	ENSSTOG00000006615	EXOSC1	100	95.897	Ictidomys_tridecemlineatus
ENSETEG00000002469	-	100	94.872	ENSJJAG00000013311	Exosc1	100	94.872	Jaculus_jaculus
ENSETEG00000002469	-	98	76.562	ENSKMAG00000001202	exosc1	81	76.562	Kryptolebias_marmoratus
ENSETEG00000002469	-	98	78.010	ENSLBEG00000011448	exosc1	98	78.010	Labrus_bergylta
ENSETEG00000002469	-	98	58.586	ENSLOCG00000003776	exosc1	99	58.586	Lepisosteus_oculatus
ENSETEG00000002469	-	100	96.923	ENSLAFG00000015983	EXOSC1	100	96.923	Loxodonta_africana
ENSETEG00000002469	-	100	94.872	ENSMFAG00000001493	EXOSC1	100	94.872	Macaca_fascicularis
ENSETEG00000002469	-	100	94.872	ENSMMUG00000020028	EXOSC1	100	88.442	Macaca_mulatta
ENSETEG00000002469	-	100	94.872	ENSMNEG00000029816	EXOSC1	100	94.872	Macaca_nemestrina
ENSETEG00000002469	-	100	89.744	ENSMLEG00000027643	EXOSC1	100	89.744	Mandrillus_leucophaeus
ENSETEG00000002469	-	98	79.058	ENSMAMG00000012200	exosc1	98	79.058	Mastacembelus_armatus
ENSETEG00000002469	-	98	78.534	ENSMZEG00005007042	exosc1	98	78.534	Maylandia_zebra
ENSETEG00000002469	-	100	84.615	ENSMAUG00000020462	-	100	84.615	Mesocricetus_auratus
ENSETEG00000002469	-	100	95.385	ENSMICG00000007664	EXOSC1	92	95.385	Microcebus_murinus
ENSETEG00000002469	-	100	96.410	ENSMOCG00000006004	-	100	96.410	Microtus_ochrogaster
ENSETEG00000002469	-	97	90.526	ENSMOCG00000017124	-	97	90.526	Microtus_ochrogaster
ENSETEG00000002469	-	99	58.031	ENSMMOG00000021403	exosc1	99	58.031	Mola_mola
ENSETEG00000002469	-	100	90.816	ENSMODG00000004213	EXOSC1	100	90.816	Monodelphis_domestica
ENSETEG00000002469	-	94	78.804	ENSMALG00000007061	exosc1	92	78.804	Monopterus_albus
ENSETEG00000002469	-	100	95.897	MGP_CAROLIEiJ_G0022959	Exosc1	100	95.897	Mus_caroli
ENSETEG00000002469	-	100	95.897	ENSMUSG00000034321	Exosc1	100	95.897	Mus_musculus
ENSETEG00000002469	-	100	96.410	MGP_PahariEiJ_G0014449	Exosc1	100	96.410	Mus_pahari
ENSETEG00000002469	-	100	95.897	MGP_SPRETEiJ_G0023880	Exosc1	100	95.897	Mus_spretus
ENSETEG00000002469	-	100	95.897	ENSMPUG00000017044	EXOSC1	100	95.897	Mustela_putorius_furo
ENSETEG00000002469	-	100	95.385	ENSMLUG00000009228	EXOSC1	100	95.385	Myotis_lucifugus
ENSETEG00000002469	-	100	95.385	ENSNGAG00000022033	Exosc1	100	95.385	Nannospalax_galili
ENSETEG00000002469	-	98	59.686	ENSNBRG00000024007	exosc1	97	59.686	Neolamprologus_brichardi
ENSETEG00000002469	-	100	94.359	ENSNLEG00000013872	EXOSC1	100	94.359	Nomascus_leucogenys
ENSETEG00000002469	-	59	87.826	ENSMEUG00000002246	EXOSC1	100	87.826	Notamacropus_eugenii
ENSETEG00000002469	-	100	94.872	ENSOPRG00000005065	EXOSC1	100	94.872	Ochotona_princeps
ENSETEG00000002469	-	100	96.410	ENSODEG00000016709	EXOSC1	100	96.410	Octodon_degus
ENSETEG00000002469	-	98	78.534	ENSONIG00000017683	exosc1	98	78.534	Oreochromis_niloticus
ENSETEG00000002469	-	59	93.043	ENSOANG00000006563	EXOSC1	98	91.129	Ornithorhynchus_anatinus
ENSETEG00000002469	-	100	89.231	ENSOCUG00000026461	-	100	89.231	Oryctolagus_cuniculus
ENSETEG00000002469	-	100	94.388	ENSOCUG00000011898	-	100	94.388	Oryctolagus_cuniculus
ENSETEG00000002469	-	98	77.083	ENSORLG00000011595	exosc1	98	77.083	Oryzias_latipes
ENSETEG00000002469	-	98	77.083	ENSORLG00020005831	exosc1	98	77.083	Oryzias_latipes_hni
ENSETEG00000002469	-	98	77.083	ENSORLG00015004317	exosc1	98	77.083	Oryzias_latipes_hsok
ENSETEG00000002469	-	98	62.304	ENSOMEG00000013907	exosc1	98	62.304	Oryzias_melastigma
ENSETEG00000002469	-	100	94.872	ENSOGAG00000016259	EXOSC1	100	94.872	Otolemur_garnettii
ENSETEG00000002469	-	100	94.872	ENSOARG00000010136	EXOSC1	100	94.872	Ovis_aries
ENSETEG00000002469	-	100	89.394	ENSPPAG00000039842	EXOSC1	100	89.394	Pan_paniscus
ENSETEG00000002469	-	100	95.897	ENSPPRG00000023366	EXOSC1	100	95.897	Panthera_pardus
ENSETEG00000002469	-	100	95.897	ENSPTIG00000017701	EXOSC1	100	95.897	Panthera_tigris_altaica
ENSETEG00000002469	-	100	94.872	ENSPTRG00000002808	EXOSC1	100	94.872	Pan_troglodytes
ENSETEG00000002469	-	100	94.872	ENSPANG00000021324	EXOSC1	100	94.872	Papio_anubis
ENSETEG00000002469	-	98	79.581	ENSPKIG00000016037	exosc1	98	79.581	Paramormyrops_kingsleyae
ENSETEG00000002469	-	75	80.822	ENSPSIG00000013571	EXOSC1	98	81.148	Pelodiscus_sinensis
ENSETEG00000002469	-	98	68.586	ENSPMGG00000014002	exosc1	98	68.586	Periophthalmus_magnuspinnatus
ENSETEG00000002469	-	100	96.410	ENSPEMG00000010710	-	100	96.410	Peromyscus_maniculatus_bairdii
ENSETEG00000002469	-	95	70.053	ENSPMAG00000000195	exosc1	95	70.053	Petromyzon_marinus
ENSETEG00000002469	-	100	91.795	ENSPCIG00000002210	EXOSC1	99	91.795	Phascolarctos_cinereus
ENSETEG00000002469	-	98	74.346	ENSPFOG00000006755	exosc1	94	74.346	Poecilia_formosa
ENSETEG00000002469	-	98	74.346	ENSPLAG00000005880	exosc1	98	74.346	Poecilia_latipinna
ENSETEG00000002469	-	98	74.346	ENSPMEG00000015598	exosc1	94	74.346	Poecilia_mexicana
ENSETEG00000002469	-	98	66.146	ENSPREG00000000405	exosc1	93	66.146	Poecilia_reticulata
ENSETEG00000002469	-	100	94.359	ENSPPYG00000002531	EXOSC1	100	94.359	Pongo_abelii
ENSETEG00000002469	-	100	95.897	ENSPCAG00000009135	EXOSC1	100	95.897	Procavia_capensis
ENSETEG00000002469	-	100	89.744	ENSPCOG00000027539	EXOSC1	100	89.744	Propithecus_coquereli
ENSETEG00000002469	-	100	95.897	ENSPVAG00000003372	EXOSC1	100	95.897	Pteropus_vampyrus
ENSETEG00000002469	-	98	78.534	ENSPNYG00000021745	exosc1	98	78.534	Pundamilia_nyererei
ENSETEG00000002469	-	98	79.058	ENSPNAG00000001944	exosc1	98	79.058	Pygocentrus_nattereri
ENSETEG00000002469	-	100	96.410	ENSRNOG00000048708	Exosc1	100	96.410	Rattus_norvegicus
ENSETEG00000002469	-	100	94.872	ENSRBIG00000035618	EXOSC1	100	94.872	Rhinopithecus_bieti
ENSETEG00000002469	-	100	94.872	ENSRROG00000032589	EXOSC1	92	94.872	Rhinopithecus_roxellana
ENSETEG00000002469	-	100	96.410	ENSSBOG00000000359	EXOSC1	100	96.410	Saimiri_boliviensis_boliviensis
ENSETEG00000002469	-	75	93.878	ENSSHAG00000018219	EXOSC1	100	93.878	Sarcophilus_harrisii
ENSETEG00000002469	-	97	76.316	ENSSFOG00015016289	-	98	76.316	Scleropages_formosus
ENSETEG00000002469	-	98	81.152	ENSSFOG00015009069	exosc1	98	81.152	Scleropages_formosus
ENSETEG00000002469	-	98	79.058	ENSSMAG00000003721	exosc1	98	79.058	Scophthalmus_maximus
ENSETEG00000002469	-	98	79.058	ENSSDUG00000002993	exosc1	98	79.058	Seriola_dumerili
ENSETEG00000002469	-	98	79.058	ENSSLDG00000025181	exosc1	98	79.058	Seriola_lalandi_dorsalis
ENSETEG00000002469	-	100	83.077	ENSSARG00000000162	EXOSC1	100	83.077	Sorex_araneus
ENSETEG00000002469	-	99	82.474	ENSSPUG00000012263	EXOSC1	99	82.474	Sphenodon_punctatus
ENSETEG00000002469	-	98	70.157	ENSSPAG00000016792	exosc1	82	70.157	Stegastes_partitus
ENSETEG00000002469	-	100	94.872	ENSSSCG00000010518	EXOSC1	91	94.872	Sus_scrofa
ENSETEG00000002469	-	98	82.812	ENSTGUG00000009692	EXOSC1	99	82.812	Taeniopygia_guttata
ENSETEG00000002469	-	97	71.429	ENSTRUG00000007706	exosc1	98	71.429	Takifugu_rubripes
ENSETEG00000002469	-	97	71.354	ENSTNIG00000014079	exosc1	97	71.354	Tetraodon_nigroviridis
ENSETEG00000002469	-	100	86.667	ENSTBEG00000006011	EXOSC1	100	86.667	Tupaia_belangeri
ENSETEG00000002469	-	94	96.739	ENSTTRG00000009887	EXOSC1	100	96.739	Tursiops_truncatus
ENSETEG00000002469	-	100	80.513	ENSUAMG00000010266	EXOSC1	100	80.513	Ursus_americanus
ENSETEG00000002469	-	100	80.513	ENSUMAG00000022002	EXOSC1	100	80.513	Ursus_maritimus
ENSETEG00000002469	-	100	95.385	ENSVVUG00000023192	EXOSC1	63	95.385	Vulpes_vulpes
ENSETEG00000002469	-	98	79.167	ENSXETG00000003434	exosc1	99	79.167	Xenopus_tropicalis
ENSETEG00000002469	-	62	84.167	ENSXCOG00000014499	exosc1	92	84.167	Xiphophorus_couchianus
ENSETEG00000002469	-	98	66.667	ENSXMAG00000023382	exosc1	93	66.667	Xiphophorus_maculatus