EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000002540 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 17299 bases
Position: chrGeneScaffold_7507:47710-65008
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000002073	RNA_pol_Rpb1_5	PF04998.17	4.4e-101	1	1
ENSETEP00000002073	RNA_pol_Rpb1_4	PF05000.17	2.7e-38	1	1
ENSETEP00000002073	RNA_pol_Rpb1_2	PF00623.20	1.9e-40	1	1
ENSETEP00000002073	RNA_pol_Rpb1_3	PF04983.18	6.4e-50	1	1
ENSETEP00000002073	RNA_pol_Rpb1_1	PF04997.12	2.2e-68	1	1
ENSETEP00000002073	RNA_pol_Rpb1_7	PF04990.12	7.1e-32	1	1
ENSETEP00000002073	RNA_pol_Rpb1_6	PF04992.14	1.7e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000002541	-	5679	-	ENSETEP00000002073	1893 (aa)	-	UPI0000E40E47

Gene Model

Click here to download ENSETEG00000002540's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000002540's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000002540	-	79	91.096	ENSAPOG00000006552	polr2a	91	90.000	Acanthochromis_polyacanthus
ENSETEG00000002540	-	94	84.348	ENSAMEG00000016265	-	94	87.707	Ailuropoda_melanoleuca
ENSETEG00000002540	-	87	87.757	ENSACIG00000015982	polr2a	94	87.642	Amphilophus_citrinellus
ENSETEG00000002540	-	87	87.586	ENSAOCG00000004255	polr2a	94	88.076	Amphiprion_ocellaris
ENSETEG00000002540	-	87	91.267	ENSAPEG00000012623	polr2a	94	90.163	Amphiprion_percula
ENSETEG00000002540	-	87	90.839	ENSATEG00000019644	polr2a	94	89.756	Anabas_testudineus
ENSETEG00000002540	-	87	94.768	ENSACAG00000014561	POLR2A	94	93.577	Anolis_carolinensis
ENSETEG00000002540	-	87	92.796	ENSANAG00000020093	-	94	88.097	Aotus_nancymaae
ENSETEG00000002540	-	87	91.096	ENSACLG00000006735	polr2a	94	90.000	Astatotilapia_calliptera
ENSETEG00000002540	-	87	91.438	ENSAMXG00000020046	polr2a	94	90.325	Astyanax_mexicanus
ENSETEG00000002540	-	94	88.097	ENSBTAG00000046765	POLR2A	94	88.097	Bos_taurus
ENSETEG00000002540	-	86	69.160	WBGene00000123	ama-1	90	68.506	Caenorhabditis_elegans
ENSETEG00000002540	-	94	85.030	ENSCAFG00000016532	POLR2A	93	90.022	Canis_familiaris
ENSETEG00000002540	-	87	91.595	ENSCAFG00020007929	-	94	86.791	Canis_lupus_dingo
ENSETEG00000002540	-	94	88.097	ENSCHIG00000027173	-	94	88.097	Capra_hircus
ENSETEG00000002540	-	87	95.195	ENSTSYG00000012803	-	94	89.457	Carlito_syrichta
ENSETEG00000002540	-	83	97.610	ENSCAPG00000001882	-	91	97.610	Cavia_aperea
ENSETEG00000002540	-	87	95.625	ENSCPOG00000014812	-	94	91.795	Cavia_porcellus
ENSETEG00000002540	-	87	92.796	ENSCCAG00000020938	-	94	88.097	Cebus_capucinus
ENSETEG00000002540	-	94	84.711	ENSCATG00000013680	-	94	88.097	Cercocebus_atys
ENSETEG00000002540	-	87	92.539	ENSCLAG00000012196	-	94	90.172	Chinchilla_lanigera
ENSETEG00000002540	-	87	85.605	ENSCSAG00000011644	-	94	84.895	Chlorocebus_sabaeus
ENSETEG00000002540	-	87	90.395	ENSCPBG00000012697	POLR2A	94	89.268	Chrysemys_picta_bellii
ENSETEG00000002540	-	88	72.374	ENSCING00000007884	-	93	71.242	Ciona_intestinalis
ENSETEG00000002540	-	87	72.567	ENSCSAVG00000008334	-	93	76.389	Ciona_savignyi
ENSETEG00000002540	-	87	93.824	ENSCANG00000010622	-	94	92.697	Colobus_angolensis_palliatus
ENSETEG00000002540	-	87	87.225	ENSCGRG00001003538	Polr2a	94	86.437	Cricetulus_griseus_chok1gshd
ENSETEG00000002540	-	79	90.948	ENSCGRG00000012105	Polr2a	94	89.832	Cricetulus_griseus_crigri
ENSETEG00000002540	-	87	90.325	ENSCSEG00000002635	polr2a	94	89.268	Cynoglossus_semilaevis
ENSETEG00000002540	-	87	91.695	ENSCVAG00000005156	polr2a	94	90.569	Cyprinodon_variegatus
ENSETEG00000002540	-	87	91.104	ENSDARG00000099966	polr2a	94	90.008	Danio_rerio
ENSETEG00000002540	-	87	91.252	ENSDNOG00000016482	-	94	90.244	Dasypus_novemcinctus
ENSETEG00000002540	-	87	92.796	ENSDORG00000008667	Polr2a	94	88.097	Dipodomys_ordii
ENSETEG00000002540	-	89	65.677	FBgn0003277	RpII215	93	69.024	Drosophila_melanogaster
ENSETEG00000002540	-	87	85.456	ENSEBUG00000013967	polr2a	94	83.740	Eptatretus_burgeri
ENSETEG00000002540	-	88	93.310	ENSEASG00005019114	-	94	92.195	Equus_asinus_asinus
ENSETEG00000002540	-	94	84.711	ENSECAG00000018485	POLR2A	94	88.097	Equus_caballus
ENSETEG00000002540	-	73	96.008	ENSEEUG00000001154	-	87	96.008	Erinaceus_europaeus
ENSETEG00000002540	-	90	86.916	ENSELUG00000014284	polr2a	94	86.776	Esox_lucius
ENSETEG00000002540	-	87	93.396	ENSFDAG00000008287	-	94	92.276	Fukomys_damarensis
ENSETEG00000002540	-	88	91.695	ENSFHEG00000001768	polr2a	94	90.569	Fundulus_heteroclitus
ENSETEG00000002540	-	80	85.738	ENSGMOG00000007725	polr2a	93	84.367	Gadus_morhua
ENSETEG00000002540	-	90	91.524	ENSGAFG00000005389	polr2a	93	89.391	Gambusia_affinis
ENSETEG00000002540	-	88	86.031	ENSGACG00000019366	polr2a	93	84.181	Gasterosteus_aculeatus
ENSETEG00000002540	-	87	93.162	ENSGGOG00000014800	-	94	92.058	Gorilla_gorilla
ENSETEG00000002540	-	88	91.096	ENSHBUG00000018937	polr2a	94	90.000	Haplochromis_burtoni
ENSETEG00000002540	-	87	92.796	ENSHGLG00000012381	POLR2A	94	88.097	Heterocephalus_glaber_female
ENSETEG00000002540	-	87	92.796	ENSHGLG00100014843	POLR2A	94	88.097	Heterocephalus_glaber_male
ENSETEG00000002540	-	87	90.925	ENSHCOG00000011874	polr2a	94	89.837	Hippocampus_comes
ENSETEG00000002540	-	87	90.668	ENSIPUG00000002613	Polr2a	94	89.593	Ictalurus_punctatus
ENSETEG00000002540	-	87	92.796	ENSSTOG00000001304	-	94	88.097	Ictidomys_tridecemlineatus
ENSETEG00000002540	-	87	92.710	ENSJJAG00000013049	Polr2a	94	90.414	Jaculus_jaculus
ENSETEG00000002540	-	73	91.429	ENSKMAG00000016343	polr2a	77	91.429	Kryptolebias_marmoratus
ENSETEG00000002540	-	87	90.925	ENSLBEG00000027652	polr2a	94	89.837	Labrus_bergylta
ENSETEG00000002540	-	80	93.227	ENSLACG00000012071	POLR2A	88	93.227	Latimeria_chalumnae
ENSETEG00000002540	-	87	91.346	ENSLOCG00000013863	polr2a	94	88.780	Lepisosteus_oculatus
ENSETEG00000002540	-	87	95.641	ENSLAFG00000008626	-	94	95.641	Loxodonta_africana
ENSETEG00000002540	-	87	92.796	ENSMMUG00000023620	-	94	88.097	Macaca_mulatta
ENSETEG00000002540	-	94	87.190	ENSMNEG00000040407	-	94	91.382	Macaca_nemestrina
ENSETEG00000002540	-	83	97.211	ENSMLEG00000030263	-	90	97.211	Mandrillus_leucophaeus
ENSETEG00000002540	-	87	91.010	ENSMAMG00000003351	polr2a	94	89.919	Mastacembelus_armatus
ENSETEG00000002540	-	87	91.096	ENSMZEG00005021429	polr2a	94	90.000	Maylandia_zebra
ENSETEG00000002540	-	94	84.646	ENSMICG00000013372	-	86	97.744	Microcebus_murinus
ENSETEG00000002540	-	87	90.090	ENSMOCG00000018279	Polr2a	94	90.090	Microtus_ochrogaster
ENSETEG00000002540	-	81	90.411	ENSMMOG00000012515	polr2a	90	89.350	Mola_mola
ENSETEG00000002540	-	94	84.449	ENSMODG00000007009	-	94	87.820	Monodelphis_domestica
ENSETEG00000002540	-	87	90.948	ENSMALG00000008716	polr2a	91	89.756	Monopterus_albus
ENSETEG00000002540	-	94	88.028	MGP_CAROLIEiJ_G0016587	Polr2a	94	88.028	Mus_caroli
ENSETEG00000002540	-	94	88.028	ENSMUSG00000005198	Polr2a	94	88.028	Mus_musculus
ENSETEG00000002540	-	94	84.656	MGP_PahariEiJ_G0017718	Polr2a	94	88.036	Mus_pahari
ENSETEG00000002540	-	94	88.028	MGP_SPRETEiJ_G0017423	Polr2a	94	88.028	Mus_spretus
ENSETEG00000002540	-	94	84.580	ENSMPUG00000009648	-	94	87.958	Mustela_putorius_furo
ENSETEG00000002540	-	94	84.646	ENSMLUG00000009088	-	94	88.028	Myotis_lucifugus
ENSETEG00000002540	-	87	92.796	ENSNGAG00000002543	Polr2a	94	88.097	Nannospalax_galili
ENSETEG00000002540	-	87	87.500	ENSNBRG00000002005	polr2a	94	87.317	Neolamprologus_brichardi
ENSETEG00000002540	-	87	94.188	ENSNLEG00000009460	-	94	93.031	Nomascus_leucogenys
ENSETEG00000002540	-	86	99.366	ENSMEUG00000008611	-	86	99.366	Notamacropus_eugenii
ENSETEG00000002540	-	77	95.694	ENSOPRG00000015116	-	93	93.431	Ochotona_princeps
ENSETEG00000002540	-	85	95.817	ENSODEG00000017674	-	94	88.853	Octodon_degus
ENSETEG00000002540	-	87	91.010	ENSONIG00000009231	polr2a	94	89.919	Oreochromis_niloticus
ENSETEG00000002540	-	88	95.062	ENSOCUG00000017929	-	93	95.062	Oryctolagus_cuniculus
ENSETEG00000002540	-	87	91.267	ENSORLG00000006431	polr2a	94	90.163	Oryzias_latipes
ENSETEG00000002540	-	87	91.267	ENSORLG00020010235	polr2a	94	90.163	Oryzias_latipes_hni
ENSETEG00000002540	-	87	91.182	ENSORLG00015007075	polr2a	94	90.081	Oryzias_latipes_hsok
ENSETEG00000002540	-	85	91.409	ENSOMEG00000010713	polr2a	93	91.409	Oryzias_melastigma
ENSETEG00000002540	-	94	84.580	ENSOGAG00000033608	-	94	87.958	Otolemur_garnettii
ENSETEG00000002540	-	93	88.304	ENSOARG00000013874	-	94	88.304	Ovis_aries
ENSETEG00000002540	-	87	92.647	ENSPPAG00000043734	-	94	90.813	Pan_paniscus
ENSETEG00000002540	-	87	94.188	ENSPTRG00000008691	POLR2A	94	93.031	Pan_troglodytes
ENSETEG00000002540	-	87	91.681	ENSPANG00000024099	-	94	87.197	Papio_anubis
ENSETEG00000002540	-	74	92.756	ENSPKIG00000005727	polr2a	78	92.756	Paramormyrops_kingsleyae
ENSETEG00000002540	-	81	93.250	ENSPSIG00000014006	POLR2A	93	93.250	Pelodiscus_sinensis
ENSETEG00000002540	-	89	90.833	ENSPMGG00000019734	polr2a	93	90.232	Periophthalmus_magnuspinnatus
ENSETEG00000002540	-	87	92.796	ENSPEMG00000012521	Polr2a	94	88.097	Peromyscus_maniculatus_bairdii
ENSETEG00000002540	-	79	95.801	ENSPCIG00000028851	-	76	95.798	Phascolarctos_cinereus
ENSETEG00000002540	-	88	91.524	ENSPFOG00000007890	polr2a	94	90.407	Poecilia_formosa
ENSETEG00000002540	-	88	91.524	ENSPLAG00000007399	polr2a	94	90.407	Poecilia_latipinna
ENSETEG00000002540	-	88	91.524	ENSPMEG00000002071	polr2a	94	90.407	Poecilia_mexicana
ENSETEG00000002540	-	87	91.438	ENSPREG00000013122	polr2a	94	90.325	Poecilia_reticulata
ENSETEG00000002540	-	94	85.960	ENSPPYG00000007924	-	94	87.656	Pongo_abelii
ENSETEG00000002540	-	79	99.683	ENSPCAG00000006951	-	86	99.683	Procavia_capensis
ENSETEG00000002540	-	87	94.242	ENSPCOG00000025260	-	94	93.092	Propithecus_coquereli
ENSETEG00000002540	-	94	84.449	ENSPVAG00000005069	-	94	87.820	Pteropus_vampyrus
ENSETEG00000002540	-	87	91.182	ENSPNYG00000022340	polr2a	94	90.081	Pundamilia_nyererei
ENSETEG00000002540	-	87	91.267	ENSPNAG00000011237	polr2a	94	90.163	Pygocentrus_nattereri
ENSETEG00000002540	-	94	88.028	ENSRNOG00000028834	Polr2a	94	88.028	Rattus_norvegicus
ENSETEG00000002540	-	87	92.796	ENSRBIG00000002471	-	94	85.300	Rhinopithecus_bieti
ENSETEG00000002540	-	92	86.892	ENSRROG00000029583	-	94	88.089	Rhinopithecus_roxellana
ENSETEG00000002540	-	78	47.623	YDL140C	RPO21	92	65.493	Saccharomyces_cerevisiae
ENSETEG00000002540	-	87	92.796	ENSSBOG00000000808	-	94	88.097	Saimiri_boliviensis_boliviensis
ENSETEG00000002540	-	94	87.525	ENSSHAG00000002858	-	94	87.560	Sarcophilus_harrisii
ENSETEG00000002540	-	87	91.267	ENSSFOG00015023275	polr2a	94	90.163	Scleropages_formosus
ENSETEG00000002540	-	87	90.753	ENSSMAG00000009137	polr2a	94	89.675	Scophthalmus_maximus
ENSETEG00000002540	-	87	91.096	ENSSDUG00000020466	polr2a	94	90.000	Seriola_dumerili
ENSETEG00000002540	-	87	91.096	ENSSLDG00000020613	polr2a	94	90.000	Seriola_lalandi_dorsalis
ENSETEG00000002540	-	81	90.547	ENSSARG00000005875	-	93	90.547	Sorex_araneus
ENSETEG00000002540	-	87	91.267	ENSSPAG00000016741	polr2a	89	90.163	Stegastes_partitus
ENSETEG00000002540	-	87	94.854	ENSSSCG00000028278	-	94	93.659	Sus_scrofa
ENSETEG00000002540	-	74	92.982	ENSTRUG00000012320	polr2a	74	90.566	Takifugu_rubripes
ENSETEG00000002540	-	81	90.839	ENSTNIG00000010136	polr2a	93	88.609	Tetraodon_nigroviridis
ENSETEG00000002540	-	62	99.843	ENSTBEG00000013294	-	50	99.843	Tupaia_belangeri
ENSETEG00000002540	-	87	93.997	ENSTTRG00000014273	-	94	92.846	Tursiops_truncatus
ENSETEG00000002540	-	86	95.000	ENSUAMG00000014866	-	94	95.000	Ursus_americanus
ENSETEG00000002540	-	82	99.747	ENSUMAG00000015732	-	91	99.747	Ursus_maritimus
ENSETEG00000002540	-	58	97.342	ENSVPAG00000008842	-	75	97.342	Vicugna_pacos
ENSETEG00000002540	-	94	86.698	ENSVVUG00000027878	-	94	87.716	Vulpes_vulpes
ENSETEG00000002540	-	83	93.739	ENSXETG00000012465	polr2a	91	92.829	Xenopus_tropicalis
ENSETEG00000002540	-	86	87.671	ENSXCOG00000001804	polr2a	93	88.158	Xiphophorus_couchianus
ENSETEG00000002540	-	87	91.438	ENSXMAG00000015687	polr2a	94	90.325	Xiphophorus_maculatus