EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000002557 (Gene tree)
Gene ID: -
Gene Symbol: YBX3
Alias: CSDA|CSDA1|ZONAB|dbpA
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 15025 bases
Position: chrGeneScaffold_462:3387-18411
Accession: 2428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000002089	CSD	PF00313.22	8e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000002558	YBX3-201	855	-	ENSETEP00000002089	285 (aa)	-	UPI0000E41030

Gene Model

Click here to download ENSETEG00000002557's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000002557's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000002557	YBX3	99	84.155	ENSG00000060138	YBX3	91	97.619	Homo_sapiens
ENSETEG00000002557	YBX3	99	82.746	ENSAMEG00000009393	YBX3	81	84.615	Ailuropoda_melanoleuca
ENSETEG00000002557	YBX3	99	58.947	ENSAPLG00000003147	YBX3	99	60.976	Anas_platyrhynchos
ENSETEG00000002557	YBX3	99	84.155	ENSANAG00000024492	-	90	85.315	Aotus_nancymaae
ENSETEG00000002557	YBX3	97	62.595	ENSANAG00000033366	-	67	83.019	Aotus_nancymaae
ENSETEG00000002557	YBX3	99	80.282	ENSBTAG00000009663	YBX3	75	79.021	Bos_taurus
ENSETEG00000002557	YBX3	99	83.451	ENSCJAG00000021660	-	77	84.615	Callithrix_jacchus
ENSETEG00000002557	YBX3	62	88.496	ENSCJAG00000033824	-	75	85.000	Callithrix_jacchus
ENSETEG00000002557	YBX3	99	83.803	ENSCAFG00000013401	YBX3	80	88.627	Canis_familiaris
ENSETEG00000002557	YBX3	99	80.282	ENSCAFG00020006412	YBX3	75	82.168	Canis_lupus_dingo
ENSETEG00000002557	YBX3	99	80.634	ENSCHIG00000010863	YBX3	79	82.517	Capra_hircus
ENSETEG00000002557	YBX3	99	49.296	ENSTSYG00000035821	-	69	96.471	Carlito_syrichta
ENSETEG00000002557	YBX3	99	84.859	ENSTSYG00000004204	-	87	85.614	Carlito_syrichta
ENSETEG00000002557	YBX3	99	78.169	ENSCAPG00000015039	YBX3	92	79.577	Cavia_aperea
ENSETEG00000002557	YBX3	99	78.169	ENSCPOG00000011329	YBX3	83	79.577	Cavia_porcellus
ENSETEG00000002557	YBX3	99	83.803	ENSCCAG00000016469	YBX3	76	84.965	Cebus_capucinus
ENSETEG00000002557	YBX3	99	83.803	ENSCATG00000034411	YBX3	76	84.561	Cercocebus_atys
ENSETEG00000002557	YBX3	99	79.225	ENSCLAG00000016030	YBX3	93	81.053	Chinchilla_lanigera
ENSETEG00000002557	YBX3	99	84.155	ENSCSAG00000008744	YBX3	76	84.912	Chlorocebus_sabaeus
ENSETEG00000002557	YBX3	75	100.000	ENSCHOG00000011988	YBX3	58	100.000	Choloepus_hoffmanni
ENSETEG00000002557	YBX3	99	70.526	ENSCPBG00000014147	YBX3	79	72.474	Chrysemys_picta_bellii
ENSETEG00000002557	YBX3	99	84.155	ENSCANG00000036801	YBX3	90	84.912	Colobus_angolensis_palliatus
ENSETEG00000002557	YBX3	99	82.746	ENSCGRG00001016148	Ybx3	78	84.266	Cricetulus_griseus_chok1gshd
ENSETEG00000002557	YBX3	99	81.315	ENSCGRG00000004563	Ybx3	97	82.818	Cricetulus_griseus_crigri
ENSETEG00000002557	YBX3	99	82.042	ENSDORG00000009103	Ybx3	80	83.916	Dipodomys_ordii
ENSETEG00000002557	YBX3	99	76.056	ENSEASG00005014726	YBX3	67	88.889	Equus_asinus_asinus
ENSETEG00000002557	YBX3	99	79.930	ENSECAG00000013777	YBX3	76	81.818	Equus_caballus
ENSETEG00000002557	YBX3	99	82.746	ENSEEUG00000010415	YBX3	100	82.746	Erinaceus_europaeus
ENSETEG00000002557	YBX3	99	83.803	ENSFCAG00000027748	YBX3	76	84.965	Felis_catus
ENSETEG00000002557	YBX3	99	56.643	ENSFALG00000003661	YBX3	99	56.207	Ficedula_albicollis
ENSETEG00000002557	YBX3	82	83.262	ENSFDAG00000021192	YBX3	91	77.895	Fukomys_damarensis
ENSETEG00000002557	YBX3	90	80.000	ENSGALG00000031890	YBX3	68	100.000	Gallus_gallus
ENSETEG00000002557	YBX3	99	70.175	ENSGAGG00000017780	YBX3	79	70.877	Gopherus_agassizii
ENSETEG00000002557	YBX3	99	84.155	ENSGGOG00000001352	YBX3	76	85.315	Gorilla_gorilla
ENSETEG00000002557	YBX3	99	68.750	ENSHGLG00000014798	-	84	71.080	Heterocephalus_glaber_female
ENSETEG00000002557	YBX3	83	74.477	ENSHGLG00000015495	-	74	71.875	Heterocephalus_glaber_female
ENSETEG00000002557	YBX3	53	100.000	ENSHGLG00100003589	YBX3	86	58.188	Heterocephalus_glaber_male
ENSETEG00000002557	YBX3	99	76.056	ENSSTOG00000002108	-	87	77.273	Ictidomys_tridecemlineatus
ENSETEG00000002557	YBX3	99	77.465	ENSSTOG00000032577	-	80	80.420	Ictidomys_tridecemlineatus
ENSETEG00000002557	YBX3	99	59.091	ENSJJAG00000014239	Ybx3	90	84.416	Jaculus_jaculus
ENSETEG00000002557	YBX3	99	84.155	ENSLAFG00000017247	YBX3	83	80.986	Loxodonta_africana
ENSETEG00000002557	YBX3	99	84.155	ENSMFAG00000039369	YBX3	76	84.912	Macaca_fascicularis
ENSETEG00000002557	YBX3	99	84.155	ENSMMUG00000022469	YBX3	87	84.912	Macaca_mulatta
ENSETEG00000002557	YBX3	99	83.803	ENSMNEG00000045109	YBX3	76	84.561	Macaca_nemestrina
ENSETEG00000002557	YBX3	99	83.803	ENSMLEG00000033618	YBX3	80	84.211	Mandrillus_leucophaeus
ENSETEG00000002557	YBX3	90	80.000	ENSMGAG00000014224	YBX3	92	100.000	Meleagris_gallopavo
ENSETEG00000002557	YBX3	99	82.746	ENSMAUG00000012185	Ybx3	88	84.266	Mesocricetus_auratus
ENSETEG00000002557	YBX3	99	83.451	ENSMICG00000038002	-	76	85.315	Microcebus_murinus
ENSETEG00000002557	YBX3	81	85.000	ENSMICG00000031459	-	75	85.000	Microcebus_murinus
ENSETEG00000002557	YBX3	99	82.746	ENSMOCG00000016291	Ybx3	92	84.266	Microtus_ochrogaster
ENSETEG00000002557	YBX3	99	74.386	ENSMODG00000018248	YBX3	90	76.923	Monodelphis_domestica
ENSETEG00000002557	YBX3	99	82.042	MGP_CAROLIEiJ_G0028947	Ybx3	78	82.807	Mus_caroli
ENSETEG00000002557	YBX3	99	82.042	ENSMUSG00000030189	Ybx3	78	82.807	Mus_musculus
ENSETEG00000002557	YBX3	99	82.746	MGP_PahariEiJ_G0022709	Ybx3	78	83.509	Mus_pahari
ENSETEG00000002557	YBX3	99	82.394	MGP_SPRETEiJ_G0029994	Ybx3	78	83.158	Mus_spretus
ENSETEG00000002557	YBX3	99	67.354	ENSMPUG00000011810	YBX3	77	67.577	Mustela_putorius_furo
ENSETEG00000002557	YBX3	93	81.784	ENSMLUG00000007476	YBX3	100	83.026	Myotis_lucifugus
ENSETEG00000002557	YBX3	99	76.842	ENSNGAG00000000710	Ybx3	88	54.704	Nannospalax_galili
ENSETEG00000002557	YBX3	99	80.702	ENSNLEG00000034844	YBX3	81	81.119	Nomascus_leucogenys
ENSETEG00000002557	YBX3	60	77.907	ENSMEUG00000002507	-	80	77.907	Notamacropus_eugenii
ENSETEG00000002557	YBX3	83	81.857	ENSODEG00000017957	YBX3	83	77.193	Octodon_degus
ENSETEG00000002557	YBX3	95	80.147	ENSOCUG00000001889	YBX3	81	79.930	Oryctolagus_cuniculus
ENSETEG00000002557	YBX3	99	82.474	ENSOGAG00000013245	YBX3	77	84.300	Otolemur_garnettii
ENSETEG00000002557	YBX3	99	67.483	ENSOARG00000020919	YBX3	96	74.306	Ovis_aries
ENSETEG00000002557	YBX3	99	84.155	ENSPPAG00000039068	YBX3	79	85.315	Pan_paniscus
ENSETEG00000002557	YBX3	99	84.155	ENSPPRG00000005859	YBX3	76	85.315	Panthera_pardus
ENSETEG00000002557	YBX3	99	83.099	ENSPTIG00000005322	YBX3	80	84.965	Panthera_tigris_altaica
ENSETEG00000002557	YBX3	99	84.155	ENSPTRG00000004681	YBX3	76	85.315	Pan_troglodytes
ENSETEG00000002557	YBX3	99	83.803	ENSPANG00000010280	YBX3	76	84.561	Papio_anubis
ENSETEG00000002557	YBX3	74	99.029	ENSPSIG00000009247	YBX3	91	100.000	Pelodiscus_sinensis
ENSETEG00000002557	YBX3	99	82.394	ENSPEMG00000012132	-	89	84.615	Peromyscus_maniculatus_bairdii
ENSETEG00000002557	YBX3	69	100.000	ENSPEMG00000010391	-	81	58.042	Peromyscus_maniculatus_bairdii
ENSETEG00000002557	YBX3	91	69.231	ENSPCIG00000029949	YBX3	100	71.264	Phascolarctos_cinereus
ENSETEG00000002557	YBX3	99	83.803	ENSPPYG00000004279	YBX3	77	84.965	Pongo_abelii
ENSETEG00000002557	YBX3	72	95.098	ENSPCAG00000001397	YBX3	71	95.098	Procavia_capensis
ENSETEG00000002557	YBX3	60	90.698	ENSPCOG00000011663	YBX3	66	90.698	Propithecus_coquereli
ENSETEG00000002557	YBX3	99	80.282	ENSPVAG00000006740	YBX3	76	80.282	Pteropus_vampyrus
ENSETEG00000002557	YBX3	99	82.746	ENSRNOG00000005480	Ybx3	78	84.266	Rattus_norvegicus
ENSETEG00000002557	YBX3	99	84.155	ENSRBIG00000039208	YBX3	77	84.912	Rhinopithecus_bieti
ENSETEG00000002557	YBX3	99	84.155	ENSRROG00000029638	YBX3	77	84.912	Rhinopithecus_roxellana
ENSETEG00000002557	YBX3	99	84.155	ENSSBOG00000030573	YBX3	84	85.315	Saimiri_boliviensis_boliviensis
ENSETEG00000002557	YBX3	99	72.759	ENSSHAG00000003262	YBX3	97	73.196	Sarcophilus_harrisii
ENSETEG00000002557	YBX3	99	84.155	ENSSSCG00000000633	YBX3	74	85.315	Sus_scrofa
ENSETEG00000002557	YBX3	99	56.842	ENSTGUG00000012047	YBX3	99	57.840	Taeniopygia_guttata
ENSETEG00000002557	YBX3	99	85.211	ENSTBEG00000012570	YBX3	78	86.364	Tupaia_belangeri
ENSETEG00000002557	YBX3	92	74.060	ENSTTRG00000008045	YBX3	100	75.746	Tursiops_truncatus
ENSETEG00000002557	YBX3	98	79.496	ENSUAMG00000016662	YBX3	100	81.429	Ursus_americanus
ENSETEG00000002557	YBX3	99	83.099	ENSUMAG00000016118	YBX3	93	84.965	Ursus_maritimus
ENSETEG00000002557	YBX3	99	61.620	ENSVPAG00000000876	YBX3	100	63.287	Vicugna_pacos
ENSETEG00000002557	YBX3	98	79.856	ENSVVUG00000004956	YBX3	100	81.786	Vulpes_vulpes
ENSETEG00000002557	YBX3	99	51.712	ENSXETG00000016239	ybx3	89	47.475	Xenopus_tropicalis