EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000002608 (Gene tree)
Gene ID: -
Gene Symbol: CPSF4
Alias: CPSF30|NAR
Full Name: cleavage and polyadenylation specific factor 4
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 10518 bases
Position: chrGeneScaffold_5670:1709-12226
Accession: 2327
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000002124	zf-CCCH	PF00642.24	3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000002606	CPSF4-201	810	-	ENSETEP00000002124	269 (aa)	-	UPI0000E412B8

Gene Model

Click here to download ENSETEG00000002608's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000002608's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000002608	CPSF4	70	100.000	ENSG00000160917	CPSF4	100	99.107	Homo_sapiens
ENSETEG00000002608	CPSF4	70	100.000	ENSAMEG00000006252	CPSF4	70	100.000	Ailuropoda_melanoleuca
ENSETEG00000002608	CPSF4	70	95.455	ENSACIG00000009248	cpsf4	78	95.455	Amphilophus_citrinellus
ENSETEG00000002608	CPSF4	70	95.455	ENSAOCG00000019616	cpsf4	71	95.455	Amphiprion_ocellaris
ENSETEG00000002608	CPSF4	70	95.455	ENSAPEG00000011679	cpsf4	71	95.455	Amphiprion_percula
ENSETEG00000002608	CPSF4	70	95.455	ENSATEG00000007010	cpsf4	76	95.455	Anabas_testudineus
ENSETEG00000002608	CPSF4	70	100.000	ENSACAG00000012941	CPSF4	62	100.000	Anolis_carolinensis
ENSETEG00000002608	CPSF4	70	100.000	ENSANAG00000021360	CPSF4	73	100.000	Aotus_nancymaae
ENSETEG00000002608	CPSF4	70	95.455	ENSACLG00000010374	cpsf4	83	95.455	Astatotilapia_calliptera
ENSETEG00000002608	CPSF4	70	95.455	ENSAMXG00000031647	cpsf4	77	95.455	Astyanax_mexicanus
ENSETEG00000002608	CPSF4	70	100.000	ENSBTAG00000002090	CPSF4	77	100.000	Bos_taurus
ENSETEG00000002608	CPSF4	70	100.000	ENSCJAG00000015826	CPSF4	73	100.000	Callithrix_jacchus
ENSETEG00000002608	CPSF4	70	100.000	ENSCAFG00000015036	CPSF4	99	89.697	Canis_familiaris
ENSETEG00000002608	CPSF4	70	100.000	ENSCAFG00020014462	CPSF4	73	100.000	Canis_lupus_dingo
ENSETEG00000002608	CPSF4	70	100.000	ENSCHIG00000014313	CPSF4	73	100.000	Capra_hircus
ENSETEG00000002608	CPSF4	70	95.455	ENSTSYG00000014604	-	76	95.455	Carlito_syrichta
ENSETEG00000002608	CPSF4	70	100.000	ENSTSYG00000005712	-	77	100.000	Carlito_syrichta
ENSETEG00000002608	CPSF4	59	91.176	ENSTSYG00000008195	-	73	90.909	Carlito_syrichta
ENSETEG00000002608	CPSF4	51	100.000	ENSCAPG00000013881	CPSF4	54	100.000	Cavia_aperea
ENSETEG00000002608	CPSF4	70	100.000	ENSCPOG00000001783	CPSF4	77	100.000	Cavia_porcellus
ENSETEG00000002608	CPSF4	70	100.000	ENSCCAG00000028291	CPSF4	73	100.000	Cebus_capucinus
ENSETEG00000002608	CPSF4	70	100.000	ENSCATG00000038440	CPSF4	80	100.000	Cercocebus_atys
ENSETEG00000002608	CPSF4	70	100.000	ENSCLAG00000007050	CPSF4	73	100.000	Chinchilla_lanigera
ENSETEG00000002608	CPSF4	70	100.000	ENSCSAG00000017795	CPSF4	70	100.000	Chlorocebus_sabaeus
ENSETEG00000002608	CPSF4	61	80.606	ENSCPBG00000010269	-	99	80.606	Chrysemys_picta_bellii
ENSETEG00000002608	CPSF4	50	100.000	ENSCPBG00000020869	CPSF4	62	100.000	Chrysemys_picta_bellii
ENSETEG00000002608	CPSF4	61	71.515	ENSCING00000021080	-	63	71.515	Ciona_intestinalis
ENSETEG00000002608	CPSF4	61	72.121	ENSCSAVG00000011469	-	57	72.121	Ciona_savignyi
ENSETEG00000002608	CPSF4	70	100.000	ENSCANG00000019384	CPSF4	81	100.000	Colobus_angolensis_palliatus
ENSETEG00000002608	CPSF4	70	100.000	ENSCGRG00001024184	Cpsf4	77	100.000	Cricetulus_griseus_chok1gshd
ENSETEG00000002608	CPSF4	70	100.000	ENSCGRG00000013892	Cpsf4	73	100.000	Cricetulus_griseus_crigri
ENSETEG00000002608	CPSF4	70	95.455	ENSCSEG00000019055	cpsf4	73	95.455	Cynoglossus_semilaevis
ENSETEG00000002608	CPSF4	70	92.727	ENSCVAG00000016528	cpsf4	71	92.727	Cyprinodon_variegatus
ENSETEG00000002608	CPSF4	70	95.455	ENSDARG00000020217	cpsf4	69	95.455	Danio_rerio
ENSETEG00000002608	CPSF4	70	100.000	ENSDNOG00000006344	CPSF4	70	100.000	Dasypus_novemcinctus
ENSETEG00000002608	CPSF4	50	100.000	ENSDORG00000000742	Cpsf4	62	100.000	Dipodomys_ordii
ENSETEG00000002608	CPSF4	61	68.862	FBgn0015621	Clp	56	68.862	Drosophila_melanogaster
ENSETEG00000002608	CPSF4	61	81.818	ENSEBUG00000012552	cpsf4	68	81.818	Eptatretus_burgeri
ENSETEG00000002608	CPSF4	70	100.000	ENSEASG00005002487	CPSF4	77	100.000	Equus_asinus_asinus
ENSETEG00000002608	CPSF4	70	100.000	ENSECAG00000007525	CPSF4	73	100.000	Equus_caballus
ENSETEG00000002608	CPSF4	70	95.455	ENSELUG00000011481	cpsf4	69	95.455	Esox_lucius
ENSETEG00000002608	CPSF4	70	100.000	ENSFCAG00000015070	CPSF4	73	100.000	Felis_catus
ENSETEG00000002608	CPSF4	61	56.395	ENSFALG00000012906	-	100	56.395	Ficedula_albicollis
ENSETEG00000002608	CPSF4	70	100.000	ENSFALG00000013799	CPSF4	77	100.000	Ficedula_albicollis
ENSETEG00000002608	CPSF4	60	100.000	ENSFDAG00000014092	CPSF4	70	100.000	Fukomys_damarensis
ENSETEG00000002608	CPSF4	70	93.333	ENSFHEG00000010880	cpsf4	71	93.333	Fundulus_heteroclitus
ENSETEG00000002608	CPSF4	70	95.455	ENSGMOG00000002330	cpsf4	73	95.455	Gadus_morhua
ENSETEG00000002608	CPSF4	61	53.659	ENSGALG00000004441	-	62	53.659	Gallus_gallus
ENSETEG00000002608	CPSF4	70	100.000	ENSGALG00000004714	CPSF4	77	100.000	Gallus_gallus
ENSETEG00000002608	CPSF4	70	92.121	ENSGAFG00000010580	cpsf4	71	92.121	Gambusia_affinis
ENSETEG00000002608	CPSF4	70	95.455	ENSGACG00000007792	cpsf4	74	95.455	Gasterosteus_aculeatus
ENSETEG00000002608	CPSF4	61	80.606	ENSGAGG00000020579	-	92	80.606	Gopherus_agassizii
ENSETEG00000002608	CPSF4	70	100.000	ENSGAGG00000021835	CPSF4	70	100.000	Gopherus_agassizii
ENSETEG00000002608	CPSF4	70	100.000	ENSGGOG00000015131	CPSF4	73	100.000	Gorilla_gorilla
ENSETEG00000002608	CPSF4	70	95.455	ENSHBUG00000013699	cpsf4	71	95.455	Haplochromis_burtoni
ENSETEG00000002608	CPSF4	70	100.000	ENSHGLG00000017150	CPSF4	73	100.000	Heterocephalus_glaber_female
ENSETEG00000002608	CPSF4	57	100.000	ENSHGLG00100009215	-	68	100.000	Heterocephalus_glaber_male
ENSETEG00000002608	CPSF4	61	67.879	ENSHGLG00100017302	-	74	67.879	Heterocephalus_glaber_male
ENSETEG00000002608	CPSF4	70	93.333	ENSHCOG00000004397	cpsf4	71	93.333	Hippocampus_comes
ENSETEG00000002608	CPSF4	70	95.455	ENSIPUG00000017147	cpsf4	69	95.455	Ictalurus_punctatus
ENSETEG00000002608	CPSF4	70	100.000	ENSSTOG00000001688	CPSF4	77	100.000	Ictidomys_tridecemlineatus
ENSETEG00000002608	CPSF4	70	100.000	ENSJJAG00000019426	Cpsf4	73	100.000	Jaculus_jaculus
ENSETEG00000002608	CPSF4	70	95.455	ENSKMAG00000015642	cpsf4	71	95.455	Kryptolebias_marmoratus
ENSETEG00000002608	CPSF4	70	100.000	ENSLACG00000010938	CPSF4	69	100.000	Latimeria_chalumnae
ENSETEG00000002608	CPSF4	61	77.711	ENSLACG00000018470	-	68	77.711	Latimeria_chalumnae
ENSETEG00000002608	CPSF4	70	100.000	ENSLOCG00000004814	cpsf4	70	100.000	Lepisosteus_oculatus
ENSETEG00000002608	CPSF4	70	100.000	ENSLAFG00000000159	CPSF4	70	100.000	Loxodonta_africana
ENSETEG00000002608	CPSF4	70	100.000	ENSMFAG00000001462	CPSF4	81	100.000	Macaca_fascicularis
ENSETEG00000002608	CPSF4	70	100.000	ENSMMUG00000019191	CPSF4	73	100.000	Macaca_mulatta
ENSETEG00000002608	CPSF4	70	100.000	ENSMNEG00000032306	CPSF4	81	100.000	Macaca_nemestrina
ENSETEG00000002608	CPSF4	70	100.000	ENSMLEG00000034721	CPSF4	80	100.000	Mandrillus_leucophaeus
ENSETEG00000002608	CPSF4	70	95.455	ENSMAMG00000006244	cpsf4	70	95.455	Mastacembelus_armatus
ENSETEG00000002608	CPSF4	70	95.455	ENSMZEG00005007515	cpsf4	71	95.455	Maylandia_zebra
ENSETEG00000002608	CPSF4	57	100.000	ENSMGAG00000004235	CPSF4	73	100.000	Meleagris_gallopavo
ENSETEG00000002608	CPSF4	70	100.000	ENSMAUG00000021253	Cpsf4	73	100.000	Mesocricetus_auratus
ENSETEG00000002608	CPSF4	70	100.000	ENSMICG00000017429	CPSF4	73	100.000	Microcebus_murinus
ENSETEG00000002608	CPSF4	70	100.000	ENSMOCG00000014901	Cpsf4	73	100.000	Microtus_ochrogaster
ENSETEG00000002608	CPSF4	70	95.455	ENSMMOG00000001813	cpsf4	95	86.667	Mola_mola
ENSETEG00000002608	CPSF4	70	100.000	ENSMODG00000001367	CPSF4	70	100.000	Monodelphis_domestica
ENSETEG00000002608	CPSF4	70	95.455	ENSMALG00000012611	cpsf4	70	95.455	Monopterus_albus
ENSETEG00000002608	CPSF4	70	100.000	MGP_CAROLIEiJ_G0028012	Cpsf4	77	100.000	Mus_caroli
ENSETEG00000002608	CPSF4	70	100.000	ENSMUSG00000029625	Cpsf4	77	100.000	Mus_musculus
ENSETEG00000002608	CPSF4	70	100.000	MGP_PahariEiJ_G0024581	Cpsf4	77	100.000	Mus_pahari
ENSETEG00000002608	CPSF4	70	100.000	MGP_SPRETEiJ_G0029013	Cpsf4	77	100.000	Mus_spretus
ENSETEG00000002608	CPSF4	70	100.000	ENSMPUG00000016508	CPSF4	70	100.000	Mustela_putorius_furo
ENSETEG00000002608	CPSF4	57	100.000	ENSMLUG00000010980	CPSF4	73	100.000	Myotis_lucifugus
ENSETEG00000002608	CPSF4	70	100.000	ENSNGAG00000001567	Cpsf4	73	100.000	Nannospalax_galili
ENSETEG00000002608	CPSF4	61	95.455	ENSNBRG00000003943	cpsf4	66	95.455	Neolamprologus_brichardi
ENSETEG00000002608	CPSF4	70	100.000	ENSNLEG00000011074	CPSF4	77	100.000	Nomascus_leucogenys
ENSETEG00000002608	CPSF4	70	100.000	ENSMEUG00000006955	CPSF4	70	100.000	Notamacropus_eugenii
ENSETEG00000002608	CPSF4	70	100.000	ENSOPRG00000013663	CPSF4	70	100.000	Ochotona_princeps
ENSETEG00000002608	CPSF4	61	82.424	ENSODEG00000018283	-	60	82.424	Octodon_degus
ENSETEG00000002608	CPSF4	70	100.000	ENSODEG00000011181	-	73	100.000	Octodon_degus
ENSETEG00000002608	CPSF4	70	90.909	ENSODEG00000009779	-	73	90.909	Octodon_degus
ENSETEG00000002608	CPSF4	70	95.455	ENSONIG00000008495	cpsf4	71	95.455	Oreochromis_niloticus
ENSETEG00000002608	CPSF4	61	69.880	ENSOANG00000009568	-	59	69.880	Ornithorhynchus_anatinus
ENSETEG00000002608	CPSF4	57	100.000	ENSOANG00000007729	CPSF4	65	100.000	Ornithorhynchus_anatinus
ENSETEG00000002608	CPSF4	70	95.455	ENSORLG00000022798	cpsf4	71	95.455	Oryzias_latipes
ENSETEG00000002608	CPSF4	70	95.455	ENSORLG00020008548	cpsf4	71	95.455	Oryzias_latipes_hni
ENSETEG00000002608	CPSF4	70	95.455	ENSORLG00015019575	cpsf4	71	95.455	Oryzias_latipes_hsok
ENSETEG00000002608	CPSF4	70	95.455	ENSOMEG00000005176	cpsf4	75	95.455	Oryzias_melastigma
ENSETEG00000002608	CPSF4	70	100.000	ENSOGAG00000010884	CPSF4	70	100.000	Otolemur_garnettii
ENSETEG00000002608	CPSF4	70	100.000	ENSOARG00000018668	CPSF4	68	100.000	Ovis_aries
ENSETEG00000002608	CPSF4	70	100.000	ENSPPAG00000043355	CPSF4	73	100.000	Pan_paniscus
ENSETEG00000002608	CPSF4	70	100.000	ENSPPRG00000003134	CPSF4	73	100.000	Panthera_pardus
ENSETEG00000002608	CPSF4	59	100.000	ENSPTIG00000005604	CPSF4	61	100.000	Panthera_tigris_altaica
ENSETEG00000002608	CPSF4	70	100.000	ENSPTRG00000019453	CPSF4	73	100.000	Pan_troglodytes
ENSETEG00000002608	CPSF4	70	100.000	ENSPANG00000023123	CPSF4	81	100.000	Papio_anubis
ENSETEG00000002608	CPSF4	70	95.455	ENSPKIG00000014278	cpsf4	68	95.455	Paramormyrops_kingsleyae
ENSETEG00000002608	CPSF4	50	98.214	ENSPSIG00000011229	CPSF4	62	98.214	Pelodiscus_sinensis
ENSETEG00000002608	CPSF4	70	95.455	ENSPMGG00000017735	cpsf4	78	95.455	Periophthalmus_magnuspinnatus
ENSETEG00000002608	CPSF4	70	100.000	ENSPEMG00000004508	Cpsf4	73	100.000	Peromyscus_maniculatus_bairdii
ENSETEG00000002608	CPSF4	70	100.000	ENSPCIG00000024776	CPSF4	70	100.000	Phascolarctos_cinereus
ENSETEG00000002608	CPSF4	70	92.121	ENSPFOG00000014912	cpsf4	71	92.121	Poecilia_formosa
ENSETEG00000002608	CPSF4	70	92.121	ENSPLAG00000009599	cpsf4	76	92.121	Poecilia_latipinna
ENSETEG00000002608	CPSF4	70	92.121	ENSPMEG00000009790	cpsf4	71	92.121	Poecilia_mexicana
ENSETEG00000002608	CPSF4	70	92.121	ENSPREG00000018166	cpsf4	71	92.121	Poecilia_reticulata
ENSETEG00000002608	CPSF4	57	100.000	ENSPPYG00000017378	CPSF4	65	100.000	Pongo_abelii
ENSETEG00000002608	CPSF4	70	100.000	ENSPCAG00000001892	CPSF4	70	100.000	Procavia_capensis
ENSETEG00000002608	CPSF4	70	100.000	ENSPCOG00000012771	CPSF4	73	100.000	Propithecus_coquereli
ENSETEG00000002608	CPSF4	70	100.000	ENSPVAG00000007531	CPSF4	70	100.000	Pteropus_vampyrus
ENSETEG00000002608	CPSF4	70	95.455	ENSPNYG00000018559	cpsf4	71	95.455	Pundamilia_nyererei
ENSETEG00000002608	CPSF4	70	95.758	ENSPNAG00000003736	cpsf4	69	95.758	Pygocentrus_nattereri
ENSETEG00000002608	CPSF4	70	100.000	ENSRNOG00000000985	Cpsf4	77	100.000	Rattus_norvegicus
ENSETEG00000002608	CPSF4	57	100.000	ENSRBIG00000033886	CPSF4	68	100.000	Rhinopithecus_bieti
ENSETEG00000002608	CPSF4	70	100.000	ENSRROG00000040431	CPSF4	77	100.000	Rhinopithecus_roxellana
ENSETEG00000002608	CPSF4	70	100.000	ENSSBOG00000020493	CPSF4	73	100.000	Saimiri_boliviensis_boliviensis
ENSETEG00000002608	CPSF4	70	100.000	ENSSHAG00000011533	CPSF4	70	100.000	Sarcophilus_harrisii
ENSETEG00000002608	CPSF4	70	95.758	ENSSFOG00015007883	cpsf4	68	95.758	Scleropages_formosus
ENSETEG00000002608	CPSF4	70	95.455	ENSSMAG00000006374	cpsf4	77	95.455	Scophthalmus_maximus
ENSETEG00000002608	CPSF4	70	95.455	ENSSDUG00000018887	cpsf4	70	95.455	Seriola_dumerili
ENSETEG00000002608	CPSF4	70	95.455	ENSSLDG00000019078	cpsf4	70	95.455	Seriola_lalandi_dorsalis
ENSETEG00000002608	CPSF4	57	100.000	ENSSARG00000012416	CPSF4	65	100.000	Sorex_araneus
ENSETEG00000002608	CPSF4	70	100.000	ENSSPUG00000003549	CPSF4	70	100.000	Sphenodon_punctatus
ENSETEG00000002608	CPSF4	61	80.000	ENSSPUG00000014803	-	74	80.000	Sphenodon_punctatus
ENSETEG00000002608	CPSF4	70	95.455	ENSSPAG00000006174	cpsf4	78	95.455	Stegastes_partitus
ENSETEG00000002608	CPSF4	70	100.000	ENSSSCG00000026896	CPSF4	77	100.000	Sus_scrofa
ENSETEG00000002608	CPSF4	70	100.000	ENSTGUG00000007552	CPSF4	77	100.000	Taeniopygia_guttata
ENSETEG00000002608	CPSF4	70	92.727	ENSTRUG00000024220	cpsf4	71	92.727	Takifugu_rubripes
ENSETEG00000002608	CPSF4	70	92.727	ENSTNIG00000006265	cpsf4	71	92.727	Tetraodon_nigroviridis
ENSETEG00000002608	CPSF4	57	100.000	ENSTBEG00000011406	CPSF4	64	100.000	Tupaia_belangeri
ENSETEG00000002608	CPSF4	70	100.000	ENSTTRG00000003007	CPSF4	70	100.000	Tursiops_truncatus
ENSETEG00000002608	CPSF4	61	98.788	ENSUAMG00000008051	CPSF4	64	98.788	Ursus_americanus
ENSETEG00000002608	CPSF4	70	100.000	ENSUMAG00000009474	CPSF4	77	100.000	Ursus_maritimus
ENSETEG00000002608	CPSF4	70	100.000	ENSVVUG00000008824	CPSF4	77	100.000	Vulpes_vulpes
ENSETEG00000002608	CPSF4	70	100.000	ENSXETG00000009892	cpsf4	71	100.000	Xenopus_tropicalis
ENSETEG00000002608	CPSF4	61	77.576	ENSXETG00000004641	cpsf4l	61	77.576	Xenopus_tropicalis
ENSETEG00000002608	CPSF4	70	91.515	ENSXCOG00000016040	cpsf4	73	90.909	Xiphophorus_couchianus
ENSETEG00000002608	CPSF4	70	92.121	ENSXMAG00000024670	cpsf4	71	92.121	Xiphophorus_maculatus