EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000002654 (Gene tree)
Gene ID: -
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 96238 bases
Position: chrGeneScaffold_2565:52424-148661
Accession: 101660246
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000002165	EST1	PF10374.9	4e-25	1	1
ENSETEP00000002165	EST1_DNA_bind	PF10373.9	2e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000002655	SMG7-201	3312	XM_004706683	ENSETEP00000002165	1104 (aa)	XP_004706740	UPI0000E43C7E

Gene Model

Click here to download ENSETEG00000002654's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000002654's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000002654	SMG7	100	96.286	ENSG00000116698	SMG7	100	97.222	Homo_sapiens
ENSETEG00000002654	SMG7	71	71.407	ENSAPOG00000009611	smg7	78	71.256	Acanthochromis_polyacanthus
ENSETEG00000002654	SMG7	96	90.884	ENSAMEG00000002357	SMG7	97	90.794	Ailuropoda_melanoleuca
ENSETEG00000002654	SMG7	97	59.240	ENSACIG00000015152	smg7	97	59.240	Amphilophus_citrinellus
ENSETEG00000002654	SMG7	99	64.146	ENSAOCG00000013538	smg7	97	64.159	Amphiprion_ocellaris
ENSETEG00000002654	SMG7	99	64.007	ENSAPEG00000007851	smg7	97	64.020	Amphiprion_percula
ENSETEG00000002654	SMG7	99	61.538	ENSATEG00000006931	smg7	96	62.130	Anabas_testudineus
ENSETEG00000002654	SMG7	100	81.055	ENSAPLG00000015811	SMG7	97	81.055	Anas_platyrhynchos
ENSETEG00000002654	SMG7	100	83.707	ENSACAG00000014989	SMG7	97	84.052	Anolis_carolinensis
ENSETEG00000002654	SMG7	100	96.014	ENSANAG00000028114	SMG7	94	96.014	Aotus_nancymaae
ENSETEG00000002654	SMG7	99	62.869	ENSACLG00000022079	smg7	97	63.737	Astatotilapia_calliptera
ENSETEG00000002654	SMG7	99	65.889	ENSAMXG00000020809	smg7	97	66.091	Astyanax_mexicanus
ENSETEG00000002654	SMG7	99	94.708	ENSBTAG00000008003	SMG7	94	94.708	Bos_taurus
ENSETEG00000002654	SMG7	100	96.105	ENSCJAG00000005135	SMG7	94	96.105	Callithrix_jacchus
ENSETEG00000002654	SMG7	99	95.255	ENSCAFG00000013276	SMG7	94	95.164	Canis_familiaris
ENSETEG00000002654	SMG7	99	95.255	ENSCAFG00020015475	SMG7	94	95.164	Canis_lupus_dingo
ENSETEG00000002654	SMG7	99	94.531	ENSCHIG00000018192	SMG7	96	94.531	Capra_hircus
ENSETEG00000002654	SMG7	99	95.525	ENSTSYG00000002667	SMG7	94	95.438	Carlito_syrichta
ENSETEG00000002654	SMG7	99	94.891	ENSCPOG00000008906	SMG7	96	93.978	Cavia_porcellus
ENSETEG00000002654	SMG7	100	88.174	ENSCCAG00000028596	SMG7	97	92.058	Cebus_capucinus
ENSETEG00000002654	SMG7	99	96.168	ENSCATG00000011063	SMG7	94	96.168	Cercocebus_atys
ENSETEG00000002654	SMG7	100	95.018	ENSCLAG00000010751	SMG7	97	95.018	Chinchilla_lanigera
ENSETEG00000002654	SMG7	99	95.985	ENSCSAG00000012654	SMG7	94	95.985	Chlorocebus_sabaeus
ENSETEG00000002654	SMG7	95	87.847	ENSCHOG00000010522	SMG7	93	88.230	Choloepus_hoffmanni
ENSETEG00000002654	SMG7	100	87.684	ENSCPBG00000015724	SMG7	97	87.684	Chrysemys_picta_bellii
ENSETEG00000002654	SMG7	96	92.058	ENSCANG00000015680	SMG7	97	92.058	Colobus_angolensis_palliatus
ENSETEG00000002654	SMG7	100	94.565	ENSCGRG00001013705	Smg7	97	94.565	Cricetulus_griseus_chok1gshd
ENSETEG00000002654	SMG7	99	94.434	ENSCGRG00000018401	Smg7	95	94.434	Cricetulus_griseus_crigri
ENSETEG00000002654	SMG7	98	61.954	ENSCVAG00000011842	smg7	97	61.954	Cyprinodon_variegatus
ENSETEG00000002654	SMG7	99	65.579	ENSDARG00000060767	smg7	97	65.414	Danio_rerio
ENSETEG00000002654	SMG7	100	94.746	ENSDORG00000007331	Smg7	97	94.746	Dipodomys_ordii
ENSETEG00000002654	SMG7	100	95.924	ENSEASG00005006524	SMG7	97	95.924	Equus_asinus_asinus
ENSETEG00000002654	SMG7	100	96.014	ENSECAG00000004313	SMG7	97	96.014	Equus_caballus
ENSETEG00000002654	SMG7	100	94.932	ENSEEUG00000002024	SMG7	94	94.932	Erinaceus_europaeus
ENSETEG00000002654	SMG7	92	76.765	ENSELUG00000010293	smg7	99	64.340	Esox_lucius
ENSETEG00000002654	SMG7	100	95.109	ENSFCAG00000010900	SMG7	97	95.018	Felis_catus
ENSETEG00000002654	SMG7	98	82.704	ENSFALG00000003047	SMG7	97	82.177	Ficedula_albicollis
ENSETEG00000002654	SMG7	99	94.646	ENSFDAG00000012121	SMG7	96	95.023	Fukomys_damarensis
ENSETEG00000002654	SMG7	99	59.760	ENSFHEG00000011073	smg7	96	59.966	Fundulus_heteroclitus
ENSETEG00000002654	SMG7	91	67.883	ENSGMOG00000004916	smg7	92	67.883	Gadus_morhua
ENSETEG00000002654	SMG7	100	81.504	ENSGALG00000004667	SMG7	97	81.417	Gallus_gallus
ENSETEG00000002654	SMG7	99	59.777	ENSGAFG00000019000	smg7	96	59.177	Gambusia_affinis
ENSETEG00000002654	SMG7	99	64.229	ENSGACG00000001634	smg7	99	64.789	Gasterosteus_aculeatus
ENSETEG00000002654	SMG7	99	96.168	ENSGGOG00000002342	SMG7	94	96.168	Gorilla_gorilla
ENSETEG00000002654	SMG7	99	62.954	ENSHBUG00000003726	smg7	99	63.737	Haplochromis_burtoni
ENSETEG00000002654	SMG7	98	95.023	ENSHGLG00000009353	SMG7	97	95.023	Heterocephalus_glaber_female
ENSETEG00000002654	SMG7	98	93.272	ENSHGLG00100009637	-	97	93.272	Heterocephalus_glaber_male
ENSETEG00000002654	SMG7	100	87.228	ENSHGLG00100004878	-	97	87.228	Heterocephalus_glaber_male
ENSETEG00000002654	SMG7	99	66.551	ENSIPUG00000016997	smg7	96	66.551	Ictalurus_punctatus
ENSETEG00000002654	SMG7	100	96.105	ENSSTOG00000000401	SMG7	97	96.105	Ictidomys_tridecemlineatus
ENSETEG00000002654	SMG7	100	93.750	ENSJJAG00000012351	Smg7	97	93.750	Jaculus_jaculus
ENSETEG00000002654	SMG7	89	65.644	ENSKMAG00000004900	smg7	97	54.688	Kryptolebias_marmoratus
ENSETEG00000002654	SMG7	99	61.288	ENSLBEG00000002983	smg7	96	61.288	Labrus_bergylta
ENSETEG00000002654	SMG7	50	63.748	ENSLBEG00000005220	-	75	63.620	Labrus_bergylta
ENSETEG00000002654	SMG7	99	74.754	ENSLACG00000000972	SMG7	96	73.952	Latimeria_chalumnae
ENSETEG00000002654	SMG7	99	66.438	ENSLOCG00000002010	smg7	97	66.524	Lepisosteus_oculatus
ENSETEG00000002654	SMG7	99	96.804	ENSLAFG00000008186	SMG7	96	96.804	Loxodonta_africana
ENSETEG00000002654	SMG7	100	96.196	ENSMFAG00000031653	SMG7	97	96.196	Macaca_fascicularis
ENSETEG00000002654	SMG7	100	96.286	ENSMMUG00000018458	SMG7	94	96.286	Macaca_mulatta
ENSETEG00000002654	SMG7	100	88.261	ENSMNEG00000034798	SMG7	97	92.148	Macaca_nemestrina
ENSETEG00000002654	SMG7	99	96.168	ENSMLEG00000037170	SMG7	94	96.168	Mandrillus_leucophaeus
ENSETEG00000002654	SMG7	90	63.822	ENSMAMG00000018733	smg7	84	66.102	Mastacembelus_armatus
ENSETEG00000002654	SMG7	99	63.413	ENSMZEG00005015247	smg7	97	63.745	Maylandia_zebra
ENSETEG00000002654	SMG7	99	81.343	ENSMGAG00000001561	SMG7	96	81.343	Meleagris_gallopavo
ENSETEG00000002654	SMG7	100	94.837	ENSMAUG00000019484	Smg7	97	94.837	Mesocricetus_auratus
ENSETEG00000002654	SMG7	99	96.259	ENSMICG00000007145	SMG7	95	96.259	Microcebus_murinus
ENSETEG00000002654	SMG7	100	94.565	ENSMOCG00000020748	Smg7	97	94.565	Microtus_ochrogaster
ENSETEG00000002654	SMG7	99	59.466	ENSMMOG00000001524	smg7	96	59.329	Mola_mola
ENSETEG00000002654	SMG7	95	84.511	ENSMODG00000007139	SMG7	99	84.511	Monodelphis_domestica
ENSETEG00000002654	SMG7	99	63.140	ENSMALG00000000061	smg7	90	63.768	Monopterus_albus
ENSETEG00000002654	SMG7	100	94.293	MGP_CAROLIEiJ_G0014704	Smg7	97	93.931	Mus_caroli
ENSETEG00000002654	SMG7	100	94.203	ENSMUSG00000042772	Smg7	97	94.203	Mus_musculus
ENSETEG00000002654	SMG7	100	94.203	MGP_PahariEiJ_G0027940	Smg7	97	94.203	Mus_pahari
ENSETEG00000002654	SMG7	100	94.293	MGP_SPRETEiJ_G0015511	Smg7	97	94.293	Mus_spretus
ENSETEG00000002654	SMG7	98	95.207	ENSMPUG00000011732	SMG7	94	95.115	Mustela_putorius_furo
ENSETEG00000002654	SMG7	99	95.073	ENSMLUG00000015417	SMG7	96	95.073	Myotis_lucifugus
ENSETEG00000002654	SMG7	99	94.434	ENSNGAG00000009836	Smg7	96	93.607	Nannospalax_galili
ENSETEG00000002654	SMG7	98	56.304	ENSNBRG00000024343	smg7	95	65.318	Neolamprologus_brichardi
ENSETEG00000002654	SMG7	99	96.350	ENSNLEG00000018018	SMG7	94	96.350	Nomascus_leucogenys
ENSETEG00000002654	SMG7	80	85.007	ENSMEUG00000004681	SMG7	77	85.216	Notamacropus_eugenii
ENSETEG00000002654	SMG7	99	84.201	ENSOPRG00000013942	SMG7	96	83.836	Ochotona_princeps
ENSETEG00000002654	SMG7	100	95.290	ENSODEG00000010390	SMG7	97	95.290	Octodon_degus
ENSETEG00000002654	SMG7	99	60.270	ENSONIG00000000277	smg7	96	60.940	Oreochromis_niloticus
ENSETEG00000002654	SMG7	98	89.734	ENSOANG00000000994	SMG7	97	89.826	Ornithorhynchus_anatinus
ENSETEG00000002654	SMG7	99	89.690	ENSOCUG00000005887	SMG7	89	89.690	Oryctolagus_cuniculus
ENSETEG00000002654	SMG7	99	61.154	ENSORLG00000007314	smg7	70	92.763	Oryzias_latipes
ENSETEG00000002654	SMG7	99	61.671	ENSORLG00020015779	smg7	70	92.763	Oryzias_latipes_hni
ENSETEG00000002654	SMG7	99	63.313	ENSORLG00015012289	smg7	96	61.116	Oryzias_latipes_hsok
ENSETEG00000002654	SMG7	99	61.459	ENSOMEG00000002328	smg7	96	61.459	Oryzias_melastigma
ENSETEG00000002654	SMG7	99	94.107	ENSOGAG00000003107	SMG7	94	94.016	Otolemur_garnettii
ENSETEG00000002654	SMG7	99	94.343	ENSOARG00000001352	SMG7	94	94.343	Ovis_aries
ENSETEG00000002654	SMG7	100	88.348	ENSPPAG00000031619	SMG7	97	92.238	Pan_paniscus
ENSETEG00000002654	SMG7	99	95.164	ENSPPRG00000011222	SMG7	94	95.073	Panthera_pardus
ENSETEG00000002654	SMG7	99	95.077	ENSPTIG00000007242	SMG7	97	91.065	Panthera_tigris_altaica
ENSETEG00000002654	SMG7	100	96.377	ENSPTRG00000001764	SMG7	94	96.377	Pan_troglodytes
ENSETEG00000002654	SMG7	100	96.286	ENSPANG00000004520	SMG7	94	96.286	Papio_anubis
ENSETEG00000002654	SMG7	99	63.455	ENSPKIG00000007242	smg7	96	64.410	Paramormyrops_kingsleyae
ENSETEG00000002654	SMG7	99	90.785	ENSPSIG00000012201	SMG7	96	90.693	Pelodiscus_sinensis
ENSETEG00000002654	SMG7	100	93.750	ENSPEMG00000011315	Smg7	97	93.750	Peromyscus_maniculatus_bairdii
ENSETEG00000002654	SMG7	100	88.966	ENSPCIG00000003786	SMG7	92	97.576	Phascolarctos_cinereus
ENSETEG00000002654	SMG7	99	62.596	ENSPFOG00000019219	smg7	97	62.254	Poecilia_formosa
ENSETEG00000002654	SMG7	99	60.411	ENSPLAG00000001446	smg7	96	59.983	Poecilia_latipinna
ENSETEG00000002654	SMG7	99	60.411	ENSPMEG00000005218	smg7	99	59.983	Poecilia_mexicana
ENSETEG00000002654	SMG7	90	60.360	ENSPREG00000019039	smg7	91	60.397	Poecilia_reticulata
ENSETEG00000002654	SMG7	100	88.435	ENSPPYG00000000427	SMG7	97	88.435	Pongo_abelii
ENSETEG00000002654	SMG7	98	84.779	ENSPCAG00000008360	SMG7	94	84.779	Procavia_capensis
ENSETEG00000002654	SMG7	100	96.377	ENSPCOG00000011996	SMG7	94	96.377	Propithecus_coquereli
ENSETEG00000002654	SMG7	95	90.153	ENSPVAG00000000851	SMG7	89	89.675	Pteropus_vampyrus
ENSETEG00000002654	SMG7	99	62.975	ENSPNYG00000007643	smg7	97	63.761	Pundamilia_nyererei
ENSETEG00000002654	SMG7	99	66.179	ENSPNAG00000011374	smg7	97	66.093	Pygocentrus_nattereri
ENSETEG00000002654	SMG7	100	94.299	ENSRNOG00000027962	Smg7	100	95.503	Rattus_norvegicus
ENSETEG00000002654	SMG7	99	96.077	ENSRBIG00000036316	SMG7	94	96.077	Rhinopithecus_bieti
ENSETEG00000002654	SMG7	100	96.196	ENSRROG00000035719	SMG7	97	96.196	Rhinopithecus_roxellana
ENSETEG00000002654	SMG7	100	96.558	ENSSBOG00000023454	SMG7	97	96.558	Saimiri_boliviensis_boliviensis
ENSETEG00000002654	SMG7	100	84.115	ENSSHAG00000013147	SMG7	97	84.115	Sarcophilus_harrisii
ENSETEG00000002654	SMG7	99	67.042	ENSSFOG00015017252	smg7	97	67.244	Scleropages_formosus
ENSETEG00000002654	SMG7	99	63.668	ENSSMAG00000006067	smg7	96	63.621	Scophthalmus_maximus
ENSETEG00000002654	SMG7	61	71.508	ENSSDUG00000017543	smg7	96	60.619	Seriola_dumerili
ENSETEG00000002654	SMG7	99	82.358	ENSSPUG00000002064	SMG7	96	82.358	Sphenodon_punctatus
ENSETEG00000002654	SMG7	100	60.393	ENSSPAG00000008733	smg7	97	60.565	Stegastes_partitus
ENSETEG00000002654	SMG7	100	95.743	ENSSSCG00000015558	SMG7	97	95.743	Sus_scrofa
ENSETEG00000002654	SMG7	99	81.533	ENSTGUG00000003928	SMG7	97	81.446	Taeniopygia_guttata
ENSETEG00000002654	SMG7	99	63.085	ENSTNIG00000002802	smg7	96	63.249	Tetraodon_nigroviridis
ENSETEG00000002654	SMG7	79	92.688	ENSTBEG00000003220	SMG7	75	93.118	Tupaia_belangeri
ENSETEG00000002654	SMG7	99	95.890	ENSTTRG00000014778	SMG7	94	95.890	Tursiops_truncatus
ENSETEG00000002654	SMG7	96	90.678	ENSUAMG00000017473	SMG7	96	90.584	Ursus_americanus
ENSETEG00000002654	SMG7	96	95.009	ENSUMAG00000016389	SMG7	97	94.915	Ursus_maritimus
ENSETEG00000002654	SMG7	100	96.105	ENSVVUG00000008976	SMG7	97	96.105	Vulpes_vulpes
ENSETEG00000002654	SMG7	100	65.609	ENSXETG00000012528	smg7	97	65.866	Xenopus_tropicalis
ENSETEG00000002654	SMG7	99	59.914	ENSXMAG00000007123	smg7	96	59.828	Xiphophorus_maculatus