EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000002729 (Gene tree)
Gene ID: -
Gene Symbol: SF3B3
Alias: KIAA0017|RSE1|SAP130|SF3b130
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 62200 bases
Position: chrGeneScaffold_8803:73055-135254
Accession: 10770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000002235	CPSF_A	PF03178.15	3.2e-79	1	2
ENSETEP00000002235	CPSF_A	PF03178.15	3.2e-79	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000002733	SF3B3-201	3654	-	ENSETEP00000002235	1217 (aa)	-	UPI0000E42A0F

Gene Model

Click here to download ENSETEG00000002729's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000002729's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000002729	SF3B3	84	100.000	ENSG00000189091	SF3B3	100	100.000	Homo_sapiens
ENSETEG00000002729	SF3B3	80	96.203	ENSAPOG00000006172	sf3b3	81	96.203	Acanthochromis_polyacanthus
ENSETEG00000002729	SF3B3	84	100.000	ENSAMEG00000002187	SF3B3	84	100.000	Ailuropoda_melanoleuca
ENSETEG00000002729	SF3B3	70	98.571	ENSACIG00000016487	sf3b3	78	98.571	Amphilophus_citrinellus
ENSETEG00000002729	SF3B3	84	96.203	ENSAOCG00000007158	sf3b3	84	96.203	Amphiprion_ocellaris
ENSETEG00000002729	SF3B3	84	96.203	ENSAPEG00000022786	sf3b3	84	96.203	Amphiprion_percula
ENSETEG00000002729	SF3B3	84	95.781	ENSATEG00000013708	sf3b3	84	95.781	Anabas_testudineus
ENSETEG00000002729	SF3B3	65	98.925	ENSAPLG00000004996	SF3B3	80	98.925	Anas_platyrhynchos
ENSETEG00000002729	SF3B3	84	98.387	ENSACAG00000001817	SF3B3	84	98.387	Anolis_carolinensis
ENSETEG00000002729	SF3B3	84	100.000	ENSANAG00000028001	SF3B3	84	100.000	Aotus_nancymaae
ENSETEG00000002729	SF3B3	80	95.781	ENSACLG00000022555	sf3b3	81	95.781	Astatotilapia_calliptera
ENSETEG00000002729	SF3B3	84	95.359	ENSAMXG00000003410	sf3b3	84	95.359	Astyanax_mexicanus
ENSETEG00000002729	SF3B3	84	100.000	ENSBTAG00000010627	SF3B3	84	100.000	Bos_taurus
ENSETEG00000002729	SF3B3	83	70.464	WBGene00019323	teg-4	84	70.464	Caenorhabditis_elegans
ENSETEG00000002729	SF3B3	84	100.000	ENSCJAG00000014773	SF3B3	84	100.000	Callithrix_jacchus
ENSETEG00000002729	SF3B3	84	100.000	ENSCAFG00000020151	SF3B3	84	100.000	Canis_familiaris
ENSETEG00000002729	SF3B3	84	100.000	ENSCAFG00020020912	SF3B3	84	100.000	Canis_lupus_dingo
ENSETEG00000002729	SF3B3	84	100.000	ENSCHIG00000019822	SF3B3	84	100.000	Capra_hircus
ENSETEG00000002729	SF3B3	84	100.000	ENSTSYG00000007910	SF3B3	84	100.000	Carlito_syrichta
ENSETEG00000002729	SF3B3	66	96.774	ENSCAPG00000001484	SF3B3	79	96.774	Cavia_aperea
ENSETEG00000002729	SF3B3	84	100.000	ENSCPOG00000000586	SF3B3	84	100.000	Cavia_porcellus
ENSETEG00000002729	SF3B3	84	100.000	ENSCCAG00000017736	SF3B3	84	100.000	Cebus_capucinus
ENSETEG00000002729	SF3B3	84	100.000	ENSCATG00000036562	SF3B3	84	100.000	Cercocebus_atys
ENSETEG00000002729	SF3B3	84	100.000	ENSCLAG00000003921	SF3B3	85	100.000	Chinchilla_lanigera
ENSETEG00000002729	SF3B3	84	100.000	ENSCSAG00000004371	SF3B3	84	100.000	Chlorocebus_sabaeus
ENSETEG00000002729	SF3B3	72	90.295	ENSCHOG00000001878	SF3B3	72	90.295	Choloepus_hoffmanni
ENSETEG00000002729	SF3B3	84	100.000	ENSCPBG00000015853	SF3B3	84	100.000	Chrysemys_picta_bellii
ENSETEG00000002729	SF3B3	84	89.730	ENSCING00000001342	-	84	89.730	Ciona_intestinalis
ENSETEG00000002729	SF3B3	83	88.649	ENSCSAVG00000011454	-	84	88.649	Ciona_savignyi
ENSETEG00000002729	SF3B3	84	100.000	ENSCANG00000042920	SF3B3	83	100.000	Colobus_angolensis_palliatus
ENSETEG00000002729	SF3B3	84	100.000	ENSCGRG00001015908	Sf3b3	84	100.000	Cricetulus_griseus_chok1gshd
ENSETEG00000002729	SF3B3	84	100.000	ENSCGRG00000010180	Sf3b3	84	100.000	Cricetulus_griseus_crigri
ENSETEG00000002729	SF3B3	66	95.781	ENSCSEG00000014192	sf3b3	80	95.781	Cynoglossus_semilaevis
ENSETEG00000002729	SF3B3	84	95.699	ENSCVAG00000010459	sf3b3	84	95.699	Cyprinodon_variegatus
ENSETEG00000002729	SF3B3	84	96.237	ENSDARG00000103553	sf3b3	84	96.237	Danio_rerio
ENSETEG00000002729	SF3B3	69	100.000	ENSDNOG00000043626	SF3B3	81	100.000	Dasypus_novemcinctus
ENSETEG00000002729	SF3B3	84	100.000	ENSDORG00000014176	Sf3b3	84	100.000	Dipodomys_ordii
ENSETEG00000002729	SF3B3	84	87.634	FBgn0035162	Sf3b3	84	87.634	Drosophila_melanogaster
ENSETEG00000002729	SF3B3	84	94.086	ENSEBUG00000006117	sf3b3	84	94.086	Eptatretus_burgeri
ENSETEG00000002729	SF3B3	84	100.000	ENSEASG00005013376	SF3B3	84	100.000	Equus_asinus_asinus
ENSETEG00000002729	SF3B3	84	100.000	ENSECAG00000014053	SF3B3	84	100.000	Equus_caballus
ENSETEG00000002729	SF3B3	81	99.462	ENSEEUG00000015611	SF3B3	81	99.462	Erinaceus_europaeus
ENSETEG00000002729	SF3B3	84	95.781	ENSELUG00000015417	sf3b3	84	95.781	Esox_lucius
ENSETEG00000002729	SF3B3	84	100.000	ENSFCAG00000009487	SF3B3	84	100.000	Felis_catus
ENSETEG00000002729	SF3B3	84	99.156	ENSFALG00000007372	SF3B3	84	99.156	Ficedula_albicollis
ENSETEG00000002729	SF3B3	84	100.000	ENSFDAG00000002608	SF3B3	84	100.000	Fukomys_damarensis
ENSETEG00000002729	SF3B3	84	95.699	ENSFHEG00000017824	sf3b3	84	95.699	Fundulus_heteroclitus
ENSETEG00000002729	SF3B3	84	95.359	ENSGMOG00000008139	sf3b3	84	95.359	Gadus_morhua
ENSETEG00000002729	SF3B3	84	98.925	ENSGALG00000002531	SF3B3	84	98.925	Gallus_gallus
ENSETEG00000002729	SF3B3	84	95.161	ENSGAFG00000015206	sf3b3	84	95.161	Gambusia_affinis
ENSETEG00000002729	SF3B3	84	95.781	ENSGACG00000002646	sf3b3	84	95.781	Gasterosteus_aculeatus
ENSETEG00000002729	SF3B3	80	100.000	ENSGAGG00000006746	SF3B3	81	100.000	Gopherus_agassizii
ENSETEG00000002729	SF3B3	84	100.000	ENSGGOG00000003246	SF3B3	84	100.000	Gorilla_gorilla
ENSETEG00000002729	SF3B3	70	98.571	ENSHBUG00000005960	sf3b3	81	98.571	Haplochromis_burtoni
ENSETEG00000002729	SF3B3	84	100.000	ENSHGLG00000010135	SF3B3	84	100.000	Heterocephalus_glaber_female
ENSETEG00000002729	SF3B3	84	100.000	ENSHGLG00100011148	SF3B3	83	100.000	Heterocephalus_glaber_male
ENSETEG00000002729	SF3B3	84	95.699	ENSHCOG00000011981	sf3b3	84	95.699	Hippocampus_comes
ENSETEG00000002729	SF3B3	84	95.359	ENSIPUG00000020435	sf3b3	84	95.359	Ictalurus_punctatus
ENSETEG00000002729	SF3B3	84	100.000	ENSSTOG00000007065	SF3B3	84	100.000	Ictidomys_tridecemlineatus
ENSETEG00000002729	SF3B3	84	100.000	ENSJJAG00000003948	Sf3b3	84	100.000	Jaculus_jaculus
ENSETEG00000002729	SF3B3	84	95.699	ENSKMAG00000004066	sf3b3	84	95.699	Kryptolebias_marmoratus
ENSETEG00000002729	SF3B3	84	95.699	ENSLBEG00000018302	sf3b3	84	95.699	Labrus_bergylta
ENSETEG00000002729	SF3B3	82	96.296	ENSLACG00000012501	SF3B3	83	96.296	Latimeria_chalumnae
ENSETEG00000002729	SF3B3	84	97.046	ENSLOCG00000007566	sf3b3	84	97.046	Lepisosteus_oculatus
ENSETEG00000002729	SF3B3	84	100.000	ENSLAFG00000012219	SF3B3	90	100.000	Loxodonta_africana
ENSETEG00000002729	SF3B3	84	100.000	ENSMFAG00000045487	SF3B3	84	100.000	Macaca_fascicularis
ENSETEG00000002729	SF3B3	84	100.000	ENSMMUG00000017812	SF3B3	84	100.000	Macaca_mulatta
ENSETEG00000002729	SF3B3	84	100.000	ENSMNEG00000033385	SF3B3	84	100.000	Macaca_nemestrina
ENSETEG00000002729	SF3B3	80	100.000	ENSMLEG00000043891	SF3B3	82	99.624	Mandrillus_leucophaeus
ENSETEG00000002729	SF3B3	84	96.203	ENSMAMG00000016837	sf3b3	84	96.203	Mastacembelus_armatus
ENSETEG00000002729	SF3B3	84	95.781	ENSMZEG00005010836	sf3b3	84	95.781	Maylandia_zebra
ENSETEG00000002729	SF3B3	66	99.010	ENSMZEG00005026015	sf3b3	76	99.010	Maylandia_zebra
ENSETEG00000002729	SF3B3	84	98.925	ENSMGAG00000001597	SF3B3	84	98.925	Meleagris_gallopavo
ENSETEG00000002729	SF3B3	84	100.000	ENSMICG00000001363	SF3B3	83	100.000	Microcebus_murinus
ENSETEG00000002729	SF3B3	84	100.000	ENSMOCG00000006108	Sf3b3	84	100.000	Microtus_ochrogaster
ENSETEG00000002729	SF3B3	66	99.010	ENSMMOG00000002598	sf3b3	75	99.010	Mola_mola
ENSETEG00000002729	SF3B3	82	100.000	ENSMODG00000014363	SF3B3	82	100.000	Monodelphis_domestica
ENSETEG00000002729	SF3B3	84	96.203	ENSMALG00000008014	sf3b3	84	96.203	Monopterus_albus
ENSETEG00000002729	SF3B3	84	100.000	MGP_CAROLIEiJ_G0031563	Sf3b3	84	100.000	Mus_caroli
ENSETEG00000002729	SF3B3	84	100.000	ENSMUSG00000033732	Sf3b3	84	100.000	Mus_musculus
ENSETEG00000002729	SF3B3	84	100.000	MGP_SPRETEiJ_G0032681	Sf3b3	84	100.000	Mus_spretus
ENSETEG00000002729	SF3B3	84	100.000	ENSMPUG00000010277	SF3B3	84	100.000	Mustela_putorius_furo
ENSETEG00000002729	SF3B3	84	100.000	ENSMLUG00000014607	SF3B3	84	100.000	Myotis_lucifugus
ENSETEG00000002729	SF3B3	84	100.000	ENSNGAG00000021903	Sf3b3	84	100.000	Nannospalax_galili
ENSETEG00000002729	SF3B3	61	97.222	ENSNBRG00000007197	sf3b3	74	97.222	Neolamprologus_brichardi
ENSETEG00000002729	SF3B3	84	100.000	ENSNLEG00000016127	SF3B3	84	100.000	Nomascus_leucogenys
ENSETEG00000002729	SF3B3	72	100.000	ENSMEUG00000004479	SF3B3	73	100.000	Notamacropus_eugenii
ENSETEG00000002729	SF3B3	82	100.000	ENSOPRG00000009847	SF3B3	83	100.000	Ochotona_princeps
ENSETEG00000002729	SF3B3	84	100.000	ENSODEG00000014154	SF3B3	84	100.000	Octodon_degus
ENSETEG00000002729	SF3B3	84	96.203	ENSONIG00000011198	sf3b3	84	96.203	Oreochromis_niloticus
ENSETEG00000002729	SF3B3	84	100.000	ENSOANG00000001161	-	84	100.000	Ornithorhynchus_anatinus
ENSETEG00000002729	SF3B3	84	100.000	ENSOCUG00000004139	SF3B3	84	100.000	Oryctolagus_cuniculus
ENSETEG00000002729	SF3B3	84	95.359	ENSORLG00000013472	sf3b3	84	95.359	Oryzias_latipes
ENSETEG00000002729	SF3B3	84	95.359	ENSORLG00020017473	sf3b3	84	95.359	Oryzias_latipes_hni
ENSETEG00000002729	SF3B3	84	95.359	ENSORLG00015007710	sf3b3	84	95.359	Oryzias_latipes_hsok
ENSETEG00000002729	SF3B3	84	95.359	ENSOMEG00000014483	sf3b3	84	95.359	Oryzias_melastigma
ENSETEG00000002729	SF3B3	84	100.000	ENSOGAG00000016051	SF3B3	84	100.000	Otolemur_garnettii
ENSETEG00000002729	SF3B3	84	100.000	ENSOARG00000004816	SF3B3	84	100.000	Ovis_aries
ENSETEG00000002729	SF3B3	84	100.000	ENSPPAG00000026807	SF3B3	84	100.000	Pan_paniscus
ENSETEG00000002729	SF3B3	84	100.000	ENSPPRG00000001686	SF3B3	84	100.000	Panthera_pardus
ENSETEG00000002729	SF3B3	67	100.000	ENSPTIG00000020382	SF3B3	77	100.000	Panthera_tigris_altaica
ENSETEG00000002729	SF3B3	84	100.000	ENSPTRG00000008308	SF3B3	84	100.000	Pan_troglodytes
ENSETEG00000002729	SF3B3	84	100.000	ENSPANG00000024075	SF3B3	84	100.000	Papio_anubis
ENSETEG00000002729	SF3B3	84	96.203	ENSPKIG00000002712	sf3b3	84	96.203	Paramormyrops_kingsleyae
ENSETEG00000002729	SF3B3	73	100.000	ENSPSIG00000002232	SF3B3	82	100.000	Pelodiscus_sinensis
ENSETEG00000002729	SF3B3	84	100.000	ENSPEMG00000008603	Sf3b3	84	100.000	Peromyscus_maniculatus_bairdii
ENSETEG00000002729	SF3B3	84	95.161	ENSPMAG00000001793	sf3b3	84	95.161	Petromyzon_marinus
ENSETEG00000002729	SF3B3	84	100.000	ENSPCIG00000014927	SF3B3	84	100.000	Phascolarctos_cinereus
ENSETEG00000002729	SF3B3	84	95.161	ENSPFOG00000015516	sf3b3	84	95.161	Poecilia_formosa
ENSETEG00000002729	SF3B3	84	95.161	ENSPLAG00000014330	sf3b3	84	95.161	Poecilia_latipinna
ENSETEG00000002729	SF3B3	84	95.161	ENSPMEG00000019856	sf3b3	84	95.161	Poecilia_mexicana
ENSETEG00000002729	SF3B3	65	95.161	ENSPREG00000019669	sf3b3	77	95.161	Poecilia_reticulata
ENSETEG00000002729	SF3B3	79	100.000	ENSPPYG00000007539	SF3B3	83	100.000	Pongo_abelii
ENSETEG00000002729	SF3B3	72	100.000	ENSPCAG00000002623	SF3B3	73	100.000	Procavia_capensis
ENSETEG00000002729	SF3B3	77	100.000	ENSPCOG00000026582	SF3B3	92	100.000	Propithecus_coquereli
ENSETEG00000002729	SF3B3	84	100.000	ENSPVAG00000000684	SF3B3	84	100.000	Pteropus_vampyrus
ENSETEG00000002729	SF3B3	84	95.781	ENSPNYG00000003528	sf3b3	84	95.781	Pundamilia_nyererei
ENSETEG00000002729	SF3B3	84	96.624	ENSPNAG00000015419	sf3b3	84	96.624	Pygocentrus_nattereri
ENSETEG00000002729	SF3B3	84	100.000	ENSRNOG00000017724	Sf3b3	84	100.000	Rattus_norvegicus
ENSETEG00000002729	SF3B3	84	100.000	ENSRBIG00000021904	SF3B3	84	100.000	Rhinopithecus_bieti
ENSETEG00000002729	SF3B3	84	100.000	ENSRROG00000045703	SF3B3	84	100.000	Rhinopithecus_roxellana
ENSETEG00000002729	SF3B3	58	40.323	YML049C	-	52	40.323	Saccharomyces_cerevisiae
ENSETEG00000002729	SF3B3	84	100.000	ENSSBOG00000029156	SF3B3	84	100.000	Saimiri_boliviensis_boliviensis
ENSETEG00000002729	SF3B3	84	100.000	ENSSHAG00000000372	SF3B3	84	100.000	Sarcophilus_harrisii
ENSETEG00000002729	SF3B3	84	95.781	ENSSFOG00015012877	sf3b3	84	95.781	Scleropages_formosus
ENSETEG00000002729	SF3B3	84	95.699	ENSSMAG00000014386	sf3b3	84	95.699	Scophthalmus_maximus
ENSETEG00000002729	SF3B3	84	96.203	ENSSDUG00000021201	sf3b3	84	96.203	Seriola_dumerili
ENSETEG00000002729	SF3B3	84	96.203	ENSSLDG00000017532	sf3b3	84	96.203	Seriola_lalandi_dorsalis
ENSETEG00000002729	SF3B3	77	100.000	ENSSARG00000006917	SF3B3	77	100.000	Sorex_araneus
ENSETEG00000002729	SF3B3	84	99.462	ENSSPUG00000006253	SF3B3	84	99.462	Sphenodon_punctatus
ENSETEG00000002729	SF3B3	80	95.699	ENSSPAG00000003125	sf3b3	81	95.699	Stegastes_partitus
ENSETEG00000002729	SF3B3	84	100.000	ENSSSCG00000025323	SF3B3	84	100.000	Sus_scrofa
ENSETEG00000002729	SF3B3	84	99.156	ENSTGUG00000006082	SF3B3	84	99.156	Taeniopygia_guttata
ENSETEG00000002729	SF3B3	73	96.237	ENSTNIG00000004857	sf3b3	82	96.237	Tetraodon_nigroviridis
ENSETEG00000002729	SF3B3	69	100.000	ENSTBEG00000002946	SF3B3	73	100.000	Tupaia_belangeri
ENSETEG00000002729	SF3B3	84	100.000	ENSTTRG00000005855	SF3B3	84	100.000	Tursiops_truncatus
ENSETEG00000002729	SF3B3	84	100.000	ENSUAMG00000006780	SF3B3	84	100.000	Ursus_americanus
ENSETEG00000002729	SF3B3	84	100.000	ENSUMAG00000017757	SF3B3	84	100.000	Ursus_maritimus
ENSETEG00000002729	SF3B3	84	100.000	ENSVPAG00000003202	SF3B3	84	100.000	Vicugna_pacos
ENSETEG00000002729	SF3B3	84	100.000	ENSVVUG00000017922	SF3B3	84	100.000	Vulpes_vulpes
ENSETEG00000002729	SF3B3	84	97.046	ENSXETG00000032869	SF3B3	84	97.046	Xenopus_tropicalis
ENSETEG00000002729	SF3B3	61	95.161	ENSXCOG00000013628	sf3b3	76	95.161	Xiphophorus_couchianus
ENSETEG00000002729	SF3B3	84	95.161	ENSXMAG00000006334	sf3b3	84	95.161	Xiphophorus_maculatus