EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000003104 (Gene tree)
Gene ID: -
Gene Symbol: NOM1
Alias: C7orf3|PPP1R113|SGD1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 54956 bases
Position: chrGeneScaffold_4785:80975-135930
Accession: 13244
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000002546	MA3	PF02847.17	4.1e-12	1	1
ENSETEP00000002546	MIF4G	PF02854.19	6.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000003105	NOM1-201	2562	-	ENSETEP00000002546	853 (aa)	-	UPI0000E42D17

Gene Model

Click here to download ENSETEG00000003104's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000003104's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000003104	NOM1	95	60.120	ENSG00000146909	NOM1	92	71.226	Homo_sapiens
ENSETEG00000003104	NOM1	77	57.920	ENSAPOG00000012073	nom1	75	57.920	Acanthochromis_polyacanthus
ENSETEG00000003104	NOM1	74	65.330	ENSAMEG00000001412	NOM1	89	65.330	Ailuropoda_melanoleuca
ENSETEG00000003104	NOM1	77	55.924	ENSAOCG00000006229	nom1	74	55.924	Amphiprion_ocellaris
ENSETEG00000003104	NOM1	75	55.924	ENSAPEG00000015994	nom1	74	55.924	Amphiprion_percula
ENSETEG00000003104	NOM1	75	57.109	ENSATEG00000005405	nom1	73	57.109	Anabas_testudineus
ENSETEG00000003104	NOM1	76	49.694	ENSAPLG00000006585	NOM1	80	54.389	Anas_platyrhynchos
ENSETEG00000003104	NOM1	80	46.143	ENSACAG00000011192	NOM1	54	61.045	Anolis_carolinensis
ENSETEG00000003104	NOM1	75	57.857	ENSACLG00000000033	nom1	73	57.857	Astatotilapia_calliptera
ENSETEG00000003104	NOM1	73	55.425	ENSAMXG00000041486	nom1	55	58.491	Astyanax_mexicanus
ENSETEG00000003104	NOM1	95	55.904	ENSBTAG00000016435	NOM1	92	66.274	Bos_taurus
ENSETEG00000003104	NOM1	95	59.026	ENSCJAG00000004336	NOM1	98	59.080	Callithrix_jacchus
ENSETEG00000003104	NOM1	96	57.194	ENSCAFG00020005121	NOM1	90	68.396	Canis_lupus_dingo
ENSETEG00000003104	NOM1	95	53.818	ENSCHIG00000020102	NOM1	92	66.745	Capra_hircus
ENSETEG00000003104	NOM1	95	61.671	ENSTSYG00000000227	NOM1	92	71.462	Carlito_syrichta
ENSETEG00000003104	NOM1	61	61.185	ENSCAPG00000016273	NOM1	100	61.185	Cavia_aperea
ENSETEG00000003104	NOM1	84	66.915	ENSCPOG00000025538	NOM1	91	66.915	Cavia_porcellus
ENSETEG00000003104	NOM1	87	70.991	ENSCCAG00000014944	NOM1	98	70.991	Cebus_capucinus
ENSETEG00000003104	NOM1	83	56.821	ENSCLAG00000000267	NOM1	83	55.633	Chinchilla_lanigera
ENSETEG00000003104	NOM1	69	67.797	ENSCPBG00000018215	NOM1	61	54.906	Chrysemys_picta_bellii
ENSETEG00000003104	NOM1	55	71.226	ENSCANG00000041984	NOM1	92	61.940	Colobus_angolensis_palliatus
ENSETEG00000003104	NOM1	79	59.329	ENSCGRG00001020293	Nom1	91	69.104	Cricetulus_griseus_chok1gshd
ENSETEG00000003104	NOM1	62	59.475	ENSCGRG00000005405	Nom1	100	59.475	Cricetulus_griseus_crigri
ENSETEG00000003104	NOM1	84	56.777	ENSCSEG00000000932	nom1	69	56.777	Cynoglossus_semilaevis
ENSETEG00000003104	NOM1	88	58.353	ENSCVAG00000007562	nom1	77	58.294	Cyprinodon_variegatus
ENSETEG00000003104	NOM1	90	57.210	ENSDARG00000060027	nom1	87	57.210	Danio_rerio
ENSETEG00000003104	NOM1	80	53.237	ENSDORG00000015682	Nom1	98	53.540	Dipodomys_ordii
ENSETEG00000003104	NOM1	96	59.759	ENSEASG00005001489	NOM1	98	60.166	Equus_asinus_asinus
ENSETEG00000003104	NOM1	81	61.399	ENSECAG00000007596	NOM1	92	58.879	Equus_caballus
ENSETEG00000003104	NOM1	57	58.333	ENSELUG00000006266	nom1	73	57.381	Esox_lucius
ENSETEG00000003104	NOM1	88	68.632	ENSFCAG00000006467	NOM1	90	68.632	Felis_catus
ENSETEG00000003104	NOM1	79	49.787	ENSFALG00000006904	NOM1	68	64.706	Ficedula_albicollis
ENSETEG00000003104	NOM1	97	55.942	ENSFDAG00000016241	NOM1	98	54.862	Fukomys_damarensis
ENSETEG00000003104	NOM1	89	57.311	ENSFHEG00000015974	nom1	74	57.311	Fundulus_heteroclitus
ENSETEG00000003104	NOM1	71	53.791	ENSGMOG00000005129	nom1	61	53.938	Gadus_morhua
ENSETEG00000003104	NOM1	84	49.098	ENSGALG00000006437	NOM1	86	51.934	Gallus_gallus
ENSETEG00000003104	NOM1	74	56.667	ENSGAFG00000003211	nom1	91	56.667	Gambusia_affinis
ENSETEG00000003104	NOM1	95	47.700	ENSGAGG00000014347	NOM1	89	54.906	Gopherus_agassizii
ENSETEG00000003104	NOM1	95	60.822	ENSGGOG00000010920	NOM1	91	60.793	Gorilla_gorilla
ENSETEG00000003104	NOM1	81	58.152	ENSHBUG00000014616	nom1	73	58.095	Haplochromis_burtoni
ENSETEG00000003104	NOM1	96	55.569	ENSHGLG00000007392	NOM1	99	54.007	Heterocephalus_glaber_female
ENSETEG00000003104	NOM1	96	55.569	ENSHGLG00100014407	NOM1	90	65.506	Heterocephalus_glaber_male
ENSETEG00000003104	NOM1	77	46.468	ENSIPUG00000013980	nom1	56	62.963	Ictalurus_punctatus
ENSETEG00000003104	NOM1	65	60.142	ENSSTOG00000031736	NOM1	98	60.142	Ictidomys_tridecemlineatus
ENSETEG00000003104	NOM1	72	56.028	ENSLBEG00000009252	nom1	56	56.897	Labrus_bergylta
ENSETEG00000003104	NOM1	72	57.647	ENSLACG00000011777	NOM1	74	57.647	Latimeria_chalumnae
ENSETEG00000003104	NOM1	87	58.907	ENSLOCG00000012452	nom1	75	58.907	Lepisosteus_oculatus
ENSETEG00000003104	NOM1	90	75.000	ENSLAFG00000007119	NOM1	92	75.000	Loxodonta_africana
ENSETEG00000003104	NOM1	98	59.255	ENSMMUG00000039033	NOM1	90	70.657	Macaca_mulatta
ENSETEG00000003104	NOM1	54	71.462	ENSMLEG00000037062	NOM1	88	71.462	Mandrillus_leucophaeus
ENSETEG00000003104	NOM1	88	56.872	ENSMAMG00000004118	nom1	74	56.872	Mastacembelus_armatus
ENSETEG00000003104	NOM1	71	57.857	ENSMZEG00005000384	nom1	73	57.857	Maylandia_zebra
ENSETEG00000003104	NOM1	80	50.072	ENSMGAG00000005051	NOM1	79	51.750	Meleagris_gallopavo
ENSETEG00000003104	NOM1	95	56.516	ENSMAUG00000017988	Nom1	98	55.920	Mesocricetus_auratus
ENSETEG00000003104	NOM1	95	59.394	ENSMICG00000017531	NOM1	92	69.104	Microcebus_murinus
ENSETEG00000003104	NOM1	99	56.206	ENSMOCG00000015962	Nom1	98	57.026	Microtus_ochrogaster
ENSETEG00000003104	NOM1	88	52.620	ENSMMOG00000004419	nom1	73	52.620	Mola_mola
ENSETEG00000003104	NOM1	98	53.775	ENSMODG00000005177	NOM1	92	69.340	Monodelphis_domestica
ENSETEG00000003104	NOM1	66	57.632	ENSMALG00000008800	nom1	72	57.632	Monopterus_albus
ENSETEG00000003104	NOM1	98	56.109	MGP_CAROLIEiJ_G0027043	Nom1	97	55.728	Mus_caroli
ENSETEG00000003104	NOM1	99	55.920	ENSMUSG00000001569	Nom1	98	55.399	Mus_musculus
ENSETEG00000003104	NOM1	98	56.310	MGP_SPRETEiJ_G0028039	Nom1	97	55.781	Mus_spretus
ENSETEG00000003104	NOM1	79	54.919	ENSMPUG00000009745	NOM1	99	54.706	Mustela_putorius_furo
ENSETEG00000003104	NOM1	65	70.188	ENSMLUG00000009129	NOM1	81	70.188	Myotis_lucifugus
ENSETEG00000003104	NOM1	87	58.095	ENSNBRG00000016429	nom1	76	58.095	Neolamprologus_brichardi
ENSETEG00000003104	NOM1	95	60.216	ENSNLEG00000000238	NOM1	99	60.070	Nomascus_leucogenys
ENSETEG00000003104	NOM1	67	68.681	ENSMEUG00000001108	NOM1	81	83.448	Notamacropus_eugenii
ENSETEG00000003104	NOM1	86	53.623	ENSOPRG00000014676	NOM1	80	63.184	Ochotona_princeps
ENSETEG00000003104	NOM1	79	57.122	ENSODEG00000009399	NOM1	97	57.164	Octodon_degus
ENSETEG00000003104	NOM1	71	57.619	ENSONIG00000005958	nom1	60	65.455	Oreochromis_niloticus
ENSETEG00000003104	NOM1	96	60.096	ENSOCUG00000004071	-	90	73.113	Oryctolagus_cuniculus
ENSETEG00000003104	NOM1	84	58.531	ENSOCUG00000021448	-	89	58.531	Oryctolagus_cuniculus
ENSETEG00000003104	NOM1	86	57.524	ENSORLG00000010541	nom1	74	56.635	Oryzias_latipes
ENSETEG00000003104	NOM1	70	57.524	ENSORLG00020010789	nom1	80	56.635	Oryzias_latipes_hni
ENSETEG00000003104	NOM1	86	57.282	ENSORLG00015010475	nom1	80	56.398	Oryzias_latipes_hsok
ENSETEG00000003104	NOM1	62	57.282	ENSOMEG00000004219	nom1	75	56.398	Oryzias_melastigma
ENSETEG00000003104	NOM1	69	56.998	ENSOGAG00000001124	NOM1	91	58.696	Otolemur_garnettii
ENSETEG00000003104	NOM1	79	56.350	ENSOARG00000007261	NOM1	92	56.350	Ovis_aries
ENSETEG00000003104	NOM1	100	59.746	ENSPPAG00000041374	NOM1	100	60.669	Pan_paniscus
ENSETEG00000003104	NOM1	74	68.235	ENSPTIG00000013532	NOM1	89	68.235	Panthera_tigris_altaica
ENSETEG00000003104	NOM1	100	59.746	ENSPTRG00000019917	NOM1	100	60.669	Pan_troglodytes
ENSETEG00000003104	NOM1	98	59.743	ENSPANG00000007605	NOM1	91	71.698	Papio_anubis
ENSETEG00000003104	NOM1	89	52.381	ENSPKIG00000005825	nom1	91	52.381	Paramormyrops_kingsleyae
ENSETEG00000003104	NOM1	54	62.708	ENSPSIG00000017848	NOM1	88	54.528	Pelodiscus_sinensis
ENSETEG00000003104	NOM1	77	56.635	ENSPMGG00000002577	nom1	73	56.635	Periophthalmus_magnuspinnatus
ENSETEG00000003104	NOM1	95	56.563	ENSPEMG00000024180	Nom1	98	57.576	Peromyscus_maniculatus_bairdii
ENSETEG00000003104	NOM1	98	53.872	ENSPCIG00000027941	NOM1	89	69.104	Phascolarctos_cinereus
ENSETEG00000003104	NOM1	78	56.905	ENSPFOG00000015771	nom1	56	65.455	Poecilia_formosa
ENSETEG00000003104	NOM1	74	56.905	ENSPLAG00000007856	nom1	72	56.905	Poecilia_latipinna
ENSETEG00000003104	NOM1	89	56.667	ENSPMEG00000014155	nom1	72	56.667	Poecilia_mexicana
ENSETEG00000003104	NOM1	89	56.905	ENSPREG00000008850	nom1	91	56.905	Poecilia_reticulata
ENSETEG00000003104	NOM1	95	56.182	ENSPPYG00000018222	NOM1	91	62.972	Pongo_abelii
ENSETEG00000003104	NOM1	61	84.500	ENSPCAG00000000440	NOM1	74	84.500	Procavia_capensis
ENSETEG00000003104	NOM1	62	60.640	ENSPCOG00000015222	NOM1	100	60.640	Propithecus_coquereli
ENSETEG00000003104	NOM1	88	68.396	ENSPVAG00000014760	NOM1	92	68.396	Pteropus_vampyrus
ENSETEG00000003104	NOM1	71	57.381	ENSPNYG00000006975	nom1	76	57.381	Pundamilia_nyererei
ENSETEG00000003104	NOM1	96	53.593	ENSRNOG00000048969	AABR07059041.1	100	53.228	Rattus_norvegicus
ENSETEG00000003104	NOM1	98	59.160	ENSRBIG00000037042	NOM1	91	71.226	Rhinopithecus_bieti
ENSETEG00000003104	NOM1	98	58.810	ENSRROG00000037293	NOM1	91	70.755	Rhinopithecus_roxellana
ENSETEG00000003104	NOM1	71	68.868	ENSSHAG00000017998	-	89	68.868	Sarcophilus_harrisii
ENSETEG00000003104	NOM1	88	57.583	ENSSMAG00000011047	nom1	73	57.583	Scophthalmus_maximus
ENSETEG00000003104	NOM1	88	58.768	ENSSDUG00000006834	nom1	73	58.768	Seriola_dumerili
ENSETEG00000003104	NOM1	88	58.531	ENSSLDG00000021812	nom1	73	58.531	Seriola_lalandi_dorsalis
ENSETEG00000003104	NOM1	75	58.786	ENSSPUG00000002556	NOM1	72	59.524	Sphenodon_punctatus
ENSETEG00000003104	NOM1	78	57.346	ENSSPAG00000000953	nom1	77	57.346	Stegastes_partitus
ENSETEG00000003104	NOM1	83	48.188	ENSTGUG00000000702	-	97	47.450	Taeniopygia_guttata
ENSETEG00000003104	NOM1	72	57.583	ENSTRUG00000010239	nom1	73	57.583	Takifugu_rubripes
ENSETEG00000003104	NOM1	87	56.974	ENSTNIG00000012783	nom1	61	60.000	Tetraodon_nigroviridis
ENSETEG00000003104	NOM1	88	68.322	ENSTTRG00000009691	NOM1	90	68.322	Tursiops_truncatus
ENSETEG00000003104	NOM1	88	66.509	ENSUAMG00000025450	NOM1	90	66.509	Ursus_americanus
ENSETEG00000003104	NOM1	85	57.944	ENSUMAG00000014275	NOM1	85	66.509	Ursus_maritimus
ENSETEG00000003104	NOM1	84	74.725	ENSVVUG00000002608	NOM1	84	82.192	Vulpes_vulpes
ENSETEG00000003104	NOM1	82	59.666	ENSXETG00000021611	nom1	74	59.666	Xenopus_tropicalis
ENSETEG00000003104	NOM1	87	56.905	ENSXMAG00000002451	nom1	72	56.905	Xiphophorus_maculatus