EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSETEG00000003824 (Gene tree)
Gene ID: -
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 14064 bases
Position: chrGeneScaffold_9139:213017-227080
Accession: 12651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000003140	tRNA-synt_1	PF00133.22	5.7e-140	1	2
ENSETEP00000003140	tRNA-synt_1	PF00133.22	5.7e-140	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000003826	VARS-201	3414	-	ENSETEP00000003140	1137 (aa)	-	UPI0000E42F13

Gene Model

Click here to download ENSETEG00000003824's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000003824's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSETEG00000003824	VARS	63	43.502	ENSETEG00000014844	VARS2	65	43.502

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000003824	VARS	76	86.076	ENSG00000204394	VARS	99	79.141	Homo_sapiens
ENSETEG00000003824	VARS	72	74.368	ENSAPOG00000020691	vars	65	74.368	Acanthochromis_polyacanthus
ENSETEG00000003824	VARS	72	74.368	ENSAPOG00000020921	vars	65	74.368	Acanthochromis_polyacanthus
ENSETEG00000003824	VARS	77	86.643	ENSAMEG00000006417	VARS	69	86.643	Ailuropoda_melanoleuca
ENSETEG00000003824	VARS	77	74.141	ENSACIG00000013752	vars	68	74.141	Amphilophus_citrinellus
ENSETEG00000003824	VARS	77	74.684	ENSAOCG00000002447	vars	68	74.684	Amphiprion_ocellaris
ENSETEG00000003824	VARS	77	74.684	ENSAPEG00000010638	vars	68	74.684	Amphiprion_percula
ENSETEG00000003824	VARS	76	74.453	ENSATEG00000020219	vars	65	74.453	Anabas_testudineus
ENSETEG00000003824	VARS	62	77.190	ENSACAG00000029133	-	63	77.190	Anolis_carolinensis
ENSETEG00000003824	VARS	76	86.618	ENSANAG00000015453	VARS	69	86.618	Aotus_nancymaae
ENSETEG00000003824	VARS	76	74.088	ENSACLG00000025699	vars	66	74.088	Astatotilapia_calliptera
ENSETEG00000003824	VARS	66	75.182	ENSAMXG00000017716	vars	60	75.182	Astyanax_mexicanus
ENSETEG00000003824	VARS	76	86.076	ENSBTAG00000005631	VARS	69	86.076	Bos_taurus
ENSETEG00000003824	VARS	76	86.980	ENSCJAG00000002604	VARS	69	86.980	Callithrix_jacchus
ENSETEG00000003824	VARS	77	86.076	ENSCAFG00000000636	VARS	69	86.076	Canis_familiaris
ENSETEG00000003824	VARS	70	86.747	ENSCAFG00020020790	VARS	64	86.111	Canis_lupus_dingo
ENSETEG00000003824	VARS	76	86.799	ENSCHIG00000011008	VARS	69	86.799	Capra_hircus
ENSETEG00000003824	VARS	76	86.980	ENSTSYG00000001567	VARS	69	86.980	Carlito_syrichta
ENSETEG00000003824	VARS	76	86.232	ENSCAPG00000013736	VARS	75	86.232	Cavia_aperea
ENSETEG00000003824	VARS	76	86.232	ENSCPOG00000000870	VARS	68	86.232	Cavia_porcellus
ENSETEG00000003824	VARS	76	86.980	ENSCCAG00000035656	VARS	66	92.920	Cebus_capucinus
ENSETEG00000003824	VARS	76	86.257	ENSCATG00000022394	VARS	67	92.035	Cercocebus_atys
ENSETEG00000003824	VARS	74	86.207	ENSCLAG00000009470	VARS	68	86.207	Chinchilla_lanigera
ENSETEG00000003824	VARS	76	86.618	ENSCSAG00000008784	VARS	69	86.618	Chlorocebus_sabaeus
ENSETEG00000003824	VARS	60	76.460	ENSCPBG00000007943	VARS	68	75.949	Chrysemys_picta_bellii
ENSETEG00000003824	VARS	76	87.161	ENSCANG00000033570	VARS	69	87.161	Colobus_angolensis_palliatus
ENSETEG00000003824	VARS	77	86.799	ENSCGRG00001005686	Vars	69	86.799	Cricetulus_griseus_chok1gshd
ENSETEG00000003824	VARS	75	84.663	ENSCGRG00000013352	Vars	59	84.211	Cricetulus_griseus_crigri
ENSETEG00000003824	VARS	77	73.056	ENSCSEG00000019652	vars	68	73.056	Cynoglossus_semilaevis
ENSETEG00000003824	VARS	77	74.322	ENSCVAG00000022398	vars	68	74.322	Cyprinodon_variegatus
ENSETEG00000003824	VARS	77	74.322	ENSDARG00000044575	vars	69	74.322	Danio_rerio
ENSETEG00000003824	VARS	71	86.618	ENSDORG00000016433	Vars	71	86.618	Dipodomys_ordii
ENSETEG00000003824	VARS	53	68.506	ENSEBUG00000004637	vars	81	68.506	Eptatretus_burgeri
ENSETEG00000003824	VARS	77	87.703	ENSEASG00005015673	VARS	69	87.703	Equus_asinus_asinus
ENSETEG00000003824	VARS	77	87.703	ENSECAG00000014620	VARS	69	87.703	Equus_caballus
ENSETEG00000003824	VARS	60	82.237	ENSEEUG00000004116	VARS	56	82.237	Erinaceus_europaeus
ENSETEG00000003824	VARS	77	74.503	ENSELUG00000006550	vars	67	74.503	Esox_lucius
ENSETEG00000003824	VARS	77	86.799	ENSFCAG00000004510	VARS	69	86.799	Felis_catus
ENSETEG00000003824	VARS	68	86.594	ENSFDAG00000011401	VARS	75	86.594	Fukomys_damarensis
ENSETEG00000003824	VARS	77	74.322	ENSFHEG00000010672	vars	68	74.322	Fundulus_heteroclitus
ENSETEG00000003824	VARS	77	72.875	ENSGMOG00000014908	vars	72	72.875	Gadus_morhua
ENSETEG00000003824	VARS	77	74.141	ENSGAFG00000021630	vars	68	74.141	Gambusia_affinis
ENSETEG00000003824	VARS	77	73.056	ENSGACG00000009601	vars	72	73.056	Gasterosteus_aculeatus
ENSETEG00000003824	VARS	76	86.438	ENSGGOG00000011364	VARS	69	86.438	Gorilla_gorilla
ENSETEG00000003824	VARS	76	74.088	ENSHBUG00000017151	vars	66	74.088	Haplochromis_burtoni
ENSETEG00000003824	VARS	76	85.118	ENSHGLG00000011646	VARS	68	85.118	Heterocephalus_glaber_female
ENSETEG00000003824	VARS	74	81.295	ENSHGLG00100018062	VARS	67	84.746	Heterocephalus_glaber_male
ENSETEG00000003824	VARS	77	73.237	ENSHCOG00000012198	vars	69	73.237	Hippocampus_comes
ENSETEG00000003824	VARS	77	74.503	ENSIPUG00000005218	vars	69	74.503	Ictalurus_punctatus
ENSETEG00000003824	VARS	76	86.618	ENSSTOG00000013112	VARS	69	86.618	Ictidomys_tridecemlineatus
ENSETEG00000003824	VARS	77	72.333	ENSJJAG00000015343	-	72	72.333	Jaculus_jaculus
ENSETEG00000003824	VARS	76	85.353	ENSJJAG00000019749	-	68	85.353	Jaculus_jaculus
ENSETEG00000003824	VARS	76	74.635	ENSKMAG00000009455	vars	68	74.635	Kryptolebias_marmoratus
ENSETEG00000003824	VARS	77	74.141	ENSLBEG00000010341	vars	69	74.141	Labrus_bergylta
ENSETEG00000003824	VARS	70	69.751	ENSLACG00000015232	VARS	67	69.751	Latimeria_chalumnae
ENSETEG00000003824	VARS	77	75.949	ENSLOCG00000004240	vars	69	75.949	Lepisosteus_oculatus
ENSETEG00000003824	VARS	77	87.730	ENSLAFG00000023090	VARS	68	87.730	Loxodonta_africana
ENSETEG00000003824	VARS	76	86.799	ENSMFAG00000001032	VARS	69	86.799	Macaca_fascicularis
ENSETEG00000003824	VARS	76	86.799	ENSMMUG00000006828	VARS	69	86.799	Macaca_mulatta
ENSETEG00000003824	VARS	76	86.618	ENSMNEG00000042072	VARS	69	86.618	Macaca_nemestrina
ENSETEG00000003824	VARS	76	86.438	ENSMLEG00000039307	VARS	69	86.438	Mandrillus_leucophaeus
ENSETEG00000003824	VARS	77	73.960	ENSMAMG00000003949	vars	68	73.960	Mastacembelus_armatus
ENSETEG00000003824	VARS	76	74.088	ENSMZEG00005018327	vars	67	74.088	Maylandia_zebra
ENSETEG00000003824	VARS	77	87.342	ENSMAUG00000006715	Vars	69	87.342	Mesocricetus_auratus
ENSETEG00000003824	VARS	76	87.138	ENSMICG00000003548	VARS	66	92.857	Microcebus_murinus
ENSETEG00000003824	VARS	73	86.618	ENSMOCG00000015404	Vars	67	86.618	Microtus_ochrogaster
ENSETEG00000003824	VARS	74	73.779	ENSMMOG00000015801	vars	67	73.779	Mola_mola
ENSETEG00000003824	VARS	77	84.049	ENSMODG00000015204	-	69	82.459	Monodelphis_domestica
ENSETEG00000003824	VARS	77	74.503	ENSMALG00000022532	vars	69	74.503	Monopterus_albus
ENSETEG00000003824	VARS	76	86.257	MGP_CAROLIEiJ_G0021491	Vars	68	86.257	Mus_caroli
ENSETEG00000003824	VARS	76	85.895	ENSMUSG00000007029	Vars	68	85.895	Mus_musculus
ENSETEG00000003824	VARS	76	85.714	MGP_PahariEiJ_G0020486	Vars	68	85.714	Mus_pahari
ENSETEG00000003824	VARS	76	86.076	MGP_SPRETEiJ_G0022396	Vars	68	86.076	Mus_spretus
ENSETEG00000003824	VARS	77	87.703	ENSMPUG00000010821	VARS	69	87.703	Mustela_putorius_furo
ENSETEG00000003824	VARS	63	86.643	ENSMLUG00000013126	VARS	72	86.643	Myotis_lucifugus
ENSETEG00000003824	VARS	76	86.438	ENSNGAG00000012151	Vars	68	86.438	Nannospalax_galili
ENSETEG00000003824	VARS	76	73.905	ENSNBRG00000020520	vars	68	73.905	Neolamprologus_brichardi
ENSETEG00000003824	VARS	76	85.533	ENSNLEG00000006351	VARS	66	90.265	Nomascus_leucogenys
ENSETEG00000003824	VARS	77	82.459	ENSMEUG00000011378	VARS	68	82.459	Notamacropus_eugenii
ENSETEG00000003824	VARS	76	88.065	ENSOPRG00000003607	VARS	69	88.065	Ochotona_princeps
ENSETEG00000003824	VARS	76	86.413	ENSODEG00000017681	VARS	68	86.413	Octodon_degus
ENSETEG00000003824	VARS	76	73.905	ENSONIG00000013064	vars	76	73.905	Oreochromis_niloticus
ENSETEG00000003824	VARS	55	81.395	ENSOANG00000005400	VARS	64	81.395	Ornithorhynchus_anatinus
ENSETEG00000003824	VARS	76	87.342	ENSOCUG00000022463	VARS	68	87.342	Oryctolagus_cuniculus
ENSETEG00000003824	VARS	76	74.864	ENSORLG00000013063	vars	68	74.864	Oryzias_latipes
ENSETEG00000003824	VARS	76	75.407	ENSORLG00020003504	vars	68	75.407	Oryzias_latipes_hni
ENSETEG00000003824	VARS	76	75.226	ENSORLG00015009001	vars	68	75.226	Oryzias_latipes_hsok
ENSETEG00000003824	VARS	77	74.684	ENSOMEG00000015016	vars	68	74.684	Oryzias_melastigma
ENSETEG00000003824	VARS	77	86.257	ENSOGAG00000007515	VARS	69	86.257	Otolemur_garnettii
ENSETEG00000003824	VARS	76	86.438	ENSPPAG00000034012	VARS	69	86.438	Pan_paniscus
ENSETEG00000003824	VARS	77	86.980	ENSPPRG00000014855	VARS	69	86.980	Panthera_pardus
ENSETEG00000003824	VARS	69	87.500	ENSPTIG00000010462	VARS	68	86.667	Panthera_tigris_altaica
ENSETEG00000003824	VARS	76	86.438	ENSPTRG00000017985	VARS	69	86.438	Pan_troglodytes
ENSETEG00000003824	VARS	76	86.618	ENSPANG00000014565	VARS	69	86.618	Papio_anubis
ENSETEG00000003824	VARS	77	73.237	ENSPKIG00000016304	vars	69	73.237	Paramormyrops_kingsleyae
ENSETEG00000003824	VARS	76	75.182	ENSPMGG00000023909	vars	68	75.182	Periophthalmus_magnuspinnatus
ENSETEG00000003824	VARS	77	87.117	ENSPEMG00000006639	Vars	69	86.842	Peromyscus_maniculatus_bairdii
ENSETEG00000003824	VARS	77	82.821	ENSPCIG00000018553	VARS	69	82.821	Phascolarctos_cinereus
ENSETEG00000003824	VARS	77	74.322	ENSPFOG00000015690	vars	68	74.322	Poecilia_formosa
ENSETEG00000003824	VARS	77	74.503	ENSPLAG00000009590	vars	69	73.960	Poecilia_latipinna
ENSETEG00000003824	VARS	77	74.322	ENSPMEG00000004708	vars	68	74.322	Poecilia_mexicana
ENSETEG00000003824	VARS	70	75.000	ENSPREG00000013264	vars	65	75.000	Poecilia_reticulata
ENSETEG00000003824	VARS	76	86.438	ENSPPYG00000016460	VARS	70	86.438	Pongo_abelii
ENSETEG00000003824	VARS	61	96.117	ENSPCAG00000013565	VARS	54	96.117	Procavia_capensis
ENSETEG00000003824	VARS	76	87.161	ENSPCOG00000010942	VARS	69	87.161	Propithecus_coquereli
ENSETEG00000003824	VARS	77	85.895	ENSPVAG00000012403	VARS	68	85.895	Pteropus_vampyrus
ENSETEG00000003824	VARS	76	74.088	ENSPNYG00000022511	vars	68	74.088	Pundamilia_nyererei
ENSETEG00000003824	VARS	77	74.864	ENSPNAG00000020962	vars	69	74.864	Pygocentrus_nattereri
ENSETEG00000003824	VARS	76	86.257	ENSRNOG00000000867	Vars	69	86.257	Rattus_norvegicus
ENSETEG00000003824	VARS	76	86.618	ENSRBIG00000041669	VARS	67	92.035	Rhinopithecus_bieti
ENSETEG00000003824	VARS	76	86.618	ENSRROG00000045490	VARS	69	86.618	Rhinopithecus_roxellana
ENSETEG00000003824	VARS	76	86.438	ENSSBOG00000035402	VARS	69	86.438	Saimiri_boliviensis_boliviensis
ENSETEG00000003824	VARS	77	82.098	ENSSHAG00000006937	VARS	68	82.098	Sarcophilus_harrisii
ENSETEG00000003824	VARS	77	74.684	ENSSFOG00015014272	vars	69	74.684	Scleropages_formosus
ENSETEG00000003824	VARS	77	72.514	ENSSMAG00000009596	vars	68	72.514	Scophthalmus_maximus
ENSETEG00000003824	VARS	77	73.960	ENSSDUG00000014177	vars	68	73.960	Seriola_dumerili
ENSETEG00000003824	VARS	77	74.141	ENSSLDG00000025316	vars	68	74.141	Seriola_lalandi_dorsalis
ENSETEG00000003824	VARS	77	74.864	ENSSPAG00000017068	vars	68	74.864	Stegastes_partitus
ENSETEG00000003824	VARS	77	86.503	ENSSSCG00000038950	VARS	69	86.257	Sus_scrofa
ENSETEG00000003824	VARS	60	68.716	ENSTRUG00000012307	vars	64	68.761	Takifugu_rubripes
ENSETEG00000003824	VARS	77	74.684	ENSTNIG00000008011	vars	71	74.503	Tetraodon_nigroviridis
ENSETEG00000003824	VARS	72	90.099	ENSTTRG00000014128	VARS	65	90.090	Tursiops_truncatus
ENSETEG00000003824	VARS	77	84.049	ENSUAMG00000010424	VARS	69	84.211	Ursus_americanus
ENSETEG00000003824	VARS	70	91.473	ENSUMAG00000013486	VARS	65	91.506	Ursus_maritimus
ENSETEG00000003824	VARS	73	90.517	ENSVVUG00000021323	VARS	66	90.678	Vulpes_vulpes
ENSETEG00000003824	VARS	77	73.175	ENSXETG00000024076	vars	69	73.175	Xenopus_tropicalis
ENSETEG00000003824	VARS	77	73.599	ENSXCOG00000019172	vars	69	73.599	Xiphophorus_couchianus
ENSETEG00000003824	VARS	77	74.322	ENSXMAG00000010927	vars	68	74.322	Xiphophorus_maculatus