EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000003888 (Gene tree)
Gene ID: -
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 59207 bases
Position: chrGeneScaffold_314:934-60140
Accession: 25652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000003192	MMR_HSR1	PF01926.23	8.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000003890	LSG1-201	1992	-	ENSETEP00000003192	663 (aa)	-	UPI0000E438C8

Gene Model

Click here to download ENSETEG00000003888's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000003888's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000003888	LSG1	89	88.000	ENSG00000041802	LSG1	88	88.000	Homo_sapiens
ENSETEG00000003888	LSG1	89	70.667	ENSAPOG00000009694	lsg1	87	70.667	Acanthochromis_polyacanthus
ENSETEG00000003888	LSG1	89	84.000	ENSAMEG00000009343	LSG1	88	84.000	Ailuropoda_melanoleuca
ENSETEG00000003888	LSG1	87	79.032	ENSACIG00000012406	lsg1	88	76.000	Amphilophus_citrinellus
ENSETEG00000003888	LSG1	89	70.667	ENSAOCG00000016066	lsg1	87	70.667	Amphiprion_ocellaris
ENSETEG00000003888	LSG1	89	70.667	ENSAPEG00000003252	lsg1	87	70.667	Amphiprion_percula
ENSETEG00000003888	LSG1	87	79.032	ENSATEG00000011794	lsg1	88	76.000	Anabas_testudineus
ENSETEG00000003888	LSG1	84	88.095	ENSACAG00000004222	LSG1	87	88.095	Anolis_carolinensis
ENSETEG00000003888	LSG1	89	86.667	ENSANAG00000021153	LSG1	88	86.667	Aotus_nancymaae
ENSETEG00000003888	LSG1	89	74.667	ENSACLG00000000520	lsg1	88	74.667	Astatotilapia_calliptera
ENSETEG00000003888	LSG1	89	72.000	ENSAMXG00000008271	lsg1	88	72.000	Astyanax_mexicanus
ENSETEG00000003888	LSG1	89	86.667	ENSBTAG00000008461	LSG1	88	86.667	Bos_taurus
ENSETEG00000003888	LSG1	89	86.667	ENSCJAG00000013962	LSG1	88	86.667	Callithrix_jacchus
ENSETEG00000003888	LSG1	84	97.619	ENSCAFG00000013445	LSG1	88	97.619	Canis_familiaris
ENSETEG00000003888	LSG1	84	97.297	ENSCAFG00020002216	LSG1	87	97.297	Canis_lupus_dingo
ENSETEG00000003888	LSG1	89	85.333	ENSCHIG00000015769	LSG1	88	85.333	Capra_hircus
ENSETEG00000003888	LSG1	89	89.333	ENSTSYG00000001447	LSG1	88	89.333	Carlito_syrichta
ENSETEG00000003888	LSG1	84	97.619	ENSCAPG00000009856	LSG1	87	97.619	Cavia_aperea
ENSETEG00000003888	LSG1	89	88.000	ENSCCAG00000035744	LSG1	88	88.000	Cebus_capucinus
ENSETEG00000003888	LSG1	89	86.667	ENSCATG00000042060	LSG1	89	86.667	Cercocebus_atys
ENSETEG00000003888	LSG1	89	86.667	ENSCSAG00000008796	LSG1	81	86.667	Chlorocebus_sabaeus
ENSETEG00000003888	LSG1	89	69.333	ENSCPBG00000015941	LSG1	73	69.333	Chrysemys_picta_bellii
ENSETEG00000003888	LSG1	60	70.213	ENSCING00000007079	-	82	69.892	Ciona_intestinalis
ENSETEG00000003888	LSG1	56	71.277	ENSCSAVG00000002514	-	72	70.968	Ciona_savignyi
ENSETEG00000003888	LSG1	89	84.000	ENSCANG00000030709	LSG1	89	84.000	Colobus_angolensis_palliatus
ENSETEG00000003888	LSG1	89	92.000	ENSCGRG00001019846	Lsg1	88	92.000	Cricetulus_griseus_chok1gshd
ENSETEG00000003888	LSG1	89	92.000	ENSCGRG00000014617	Lsg1	88	92.000	Cricetulus_griseus_crigri
ENSETEG00000003888	LSG1	87	76.190	ENSCSEG00000008522	lsg1	88	71.053	Cynoglossus_semilaevis
ENSETEG00000003888	LSG1	87	76.271	ENSCVAG00000002484	lsg1	88	73.333	Cyprinodon_variegatus
ENSETEG00000003888	LSG1	89	75.000	ENSDARG00000015352	lsg1	88	75.000	Danio_rerio
ENSETEG00000003888	LSG1	89	85.333	ENSDNOG00000006224	LSG1	88	85.333	Dasypus_novemcinctus
ENSETEG00000003888	LSG1	72	65.625	FBgn0266284	Ns3	87	56.579	Drosophila_melanogaster
ENSETEG00000003888	LSG1	78	50.285	ENSEBUG00000003119	lsg1	73	49.904	Eptatretus_burgeri
ENSETEG00000003888	LSG1	89	88.000	ENSEASG00005000678	LSG1	88	88.000	Equus_asinus_asinus
ENSETEG00000003888	LSG1	89	88.000	ENSECAG00000017659	LSG1	88	88.000	Equus_caballus
ENSETEG00000003888	LSG1	70	78.788	ENSEEUG00000015217	LSG1	69	78.788	Erinaceus_europaeus
ENSETEG00000003888	LSG1	89	68.000	ENSELUG00000023973	lsg1	87	68.000	Esox_lucius
ENSETEG00000003888	LSG1	89	85.333	ENSFCAG00000024957	LSG1	88	85.333	Felis_catus
ENSETEG00000003888	LSG1	78	60.694	ENSFALG00000007210	LSG1	78	60.352	Ficedula_albicollis
ENSETEG00000003888	LSG1	89	89.333	ENSFDAG00000017373	LSG1	88	89.333	Fukomys_damarensis
ENSETEG00000003888	LSG1	86	75.000	ENSFHEG00000003680	lsg1	88	72.727	Fundulus_heteroclitus
ENSETEG00000003888	LSG1	70	74.000	ENSGMOG00000015834	lsg1	78	66.667	Gadus_morhua
ENSETEG00000003888	LSG1	89	59.125	ENSGALG00000007058	LSG1	77	59.808	Gallus_gallus
ENSETEG00000003888	LSG1	87	77.966	ENSGAFG00000015831	lsg1	87	74.667	Gambusia_affinis
ENSETEG00000003888	LSG1	87	70.312	ENSGACG00000009323	lsg1	88	67.532	Gasterosteus_aculeatus
ENSETEG00000003888	LSG1	89	88.000	ENSGGOG00000000520	LSG1	89	88.000	Gorilla_gorilla
ENSETEG00000003888	LSG1	89	74.667	ENSHBUG00000005659	lsg1	88	74.667	Haplochromis_burtoni
ENSETEG00000003888	LSG1	89	89.333	ENSHGLG00000017390	LSG1	88	89.333	Heterocephalus_glaber_female
ENSETEG00000003888	LSG1	89	89.333	ENSHGLG00100018587	LSG1	88	89.333	Heterocephalus_glaber_male
ENSETEG00000003888	LSG1	87	77.966	ENSHCOG00000016848	lsg1	88	76.000	Hippocampus_comes
ENSETEG00000003888	LSG1	89	71.053	ENSIPUG00000008631	lsg1	88	71.053	Ictalurus_punctatus
ENSETEG00000003888	LSG1	81	75.758	ENSSTOG00000010234	LSG1	99	75.758	Ictidomys_tridecemlineatus
ENSETEG00000003888	LSG1	89	85.333	ENSJJAG00000015513	Lsg1	88	85.333	Jaculus_jaculus
ENSETEG00000003888	LSG1	87	74.194	ENSKMAG00000009681	lsg1	87	70.667	Kryptolebias_marmoratus
ENSETEG00000003888	LSG1	87	72.581	ENSLBEG00000024261	lsg1	87	68.000	Labrus_bergylta
ENSETEG00000003888	LSG1	89	73.333	ENSLACG00000013399	LSG1	88	73.333	Latimeria_chalumnae
ENSETEG00000003888	LSG1	87	79.032	ENSLOCG00000004918	lsg1	88	73.684	Lepisosteus_oculatus
ENSETEG00000003888	LSG1	89	88.000	ENSLAFG00000012919	-	88	88.000	Loxodonta_africana
ENSETEG00000003888	LSG1	89	86.667	ENSMFAG00000039903	LSG1	89	86.667	Macaca_fascicularis
ENSETEG00000003888	LSG1	89	86.667	ENSMMUG00000010708	LSG1	88	86.667	Macaca_mulatta
ENSETEG00000003888	LSG1	89	86.667	ENSMNEG00000031538	LSG1	89	86.667	Macaca_nemestrina
ENSETEG00000003888	LSG1	89	86.667	ENSMLEG00000041184	LSG1	89	86.667	Mandrillus_leucophaeus
ENSETEG00000003888	LSG1	89	72.000	ENSMAMG00000000470	lsg1	87	72.000	Mastacembelus_armatus
ENSETEG00000003888	LSG1	89	74.667	ENSMZEG00005017865	lsg1	88	74.667	Maylandia_zebra
ENSETEG00000003888	LSG1	78	59.188	ENSMGAG00000007050	LSG1	87	59.883	Meleagris_gallopavo
ENSETEG00000003888	LSG1	86	87.013	ENSMAUG00000016976	Lsg1	86	87.013	Mesocricetus_auratus
ENSETEG00000003888	LSG1	89	85.333	ENSMICG00000049087	LSG1	88	85.333	Microcebus_murinus
ENSETEG00000003888	LSG1	89	90.667	ENSMOCG00000022136	Lsg1	88	90.667	Microtus_ochrogaster
ENSETEG00000003888	LSG1	70	82.258	ENSMMOG00000008884	lsg1	81	78.667	Mola_mola
ENSETEG00000003888	LSG1	89	51.692	ENSMODG00000019828	LSG1	90	51.899	Monodelphis_domestica
ENSETEG00000003888	LSG1	89	88.000	MGP_CAROLIEiJ_G0020648	Lsg1	88	88.000	Mus_caroli
ENSETEG00000003888	LSG1	89	86.667	ENSMUSG00000022538	Lsg1	88	86.667	Mus_musculus
ENSETEG00000003888	LSG1	88	87.692	MGP_PahariEiJ_G0016352	Lsg1	88	84.211	Mus_pahari
ENSETEG00000003888	LSG1	89	86.667	MGP_SPRETEiJ_G0021544	Lsg1	88	86.667	Mus_spretus
ENSETEG00000003888	LSG1	89	85.333	ENSMPUG00000003734	LSG1	88	85.333	Mustela_putorius_furo
ENSETEG00000003888	LSG1	89	92.000	ENSMLUG00000012548	LSG1	88	92.000	Myotis_lucifugus
ENSETEG00000003888	LSG1	89	89.333	ENSNGAG00000021872	Lsg1	88	89.333	Nannospalax_galili
ENSETEG00000003888	LSG1	89	86.667	ENSNLEG00000008293	LSG1	89	86.667	Nomascus_leucogenys
ENSETEG00000003888	LSG1	58	89.286	ENSMEUG00000009041	-	67	95.238	Notamacropus_eugenii
ENSETEG00000003888	LSG1	89	74.667	ENSONIG00000002635	lsg1	88	74.667	Oreochromis_niloticus
ENSETEG00000003888	LSG1	84	90.476	ENSOANG00000012742	LSG1	86	90.476	Ornithorhynchus_anatinus
ENSETEG00000003888	LSG1	89	86.667	ENSOCUG00000004817	LSG1	88	86.667	Oryctolagus_cuniculus
ENSETEG00000003888	LSG1	87	80.645	ENSORLG00000007695	lsg1	87	76.000	Oryzias_latipes
ENSETEG00000003888	LSG1	87	80.645	ENSORLG00020016286	lsg1	87	74.667	Oryzias_latipes_hni
ENSETEG00000003888	LSG1	87	80.645	ENSORLG00015012025	lsg1	87	76.000	Oryzias_latipes_hsok
ENSETEG00000003888	LSG1	87	80.645	ENSOMEG00000022379	lsg1	87	76.000	Oryzias_melastigma
ENSETEG00000003888	LSG1	89	85.333	ENSOGAG00000003475	LSG1	88	85.333	Otolemur_garnettii
ENSETEG00000003888	LSG1	89	85.333	ENSOARG00000020403	LSG1	88	85.333	Ovis_aries
ENSETEG00000003888	LSG1	89	88.000	ENSPPAG00000029271	LSG1	89	88.000	Pan_paniscus
ENSETEG00000003888	LSG1	89	85.333	ENSPPRG00000010281	LSG1	88	85.333	Panthera_pardus
ENSETEG00000003888	LSG1	89	85.333	ENSPTIG00000010789	LSG1	89	85.333	Panthera_tigris_altaica
ENSETEG00000003888	LSG1	89	88.000	ENSPTRG00000015760	LSG1	89	88.000	Pan_troglodytes
ENSETEG00000003888	LSG1	89	86.667	ENSPANG00000018249	LSG1	89	86.667	Papio_anubis
ENSETEG00000003888	LSG1	84	95.238	ENSPKIG00000002895	lsg1	83	95.238	Paramormyrops_kingsleyae
ENSETEG00000003888	LSG1	85	79.167	ENSPSIG00000009821	LSG1	86	79.167	Pelodiscus_sinensis
ENSETEG00000003888	LSG1	84	92.857	ENSPMGG00000000931	lsg1	87	92.857	Periophthalmus_magnuspinnatus
ENSETEG00000003888	LSG1	89	89.333	ENSPEMG00000012082	-	88	89.333	Peromyscus_maniculatus_bairdii
ENSETEG00000003888	LSG1	89	69.333	ENSPMAG00000007451	lsg1	88	69.333	Petromyzon_marinus
ENSETEG00000003888	LSG1	89	64.072	ENSPCIG00000013890	LSG1	72	63.190	Phascolarctos_cinereus
ENSETEG00000003888	LSG1	87	77.966	ENSPFOG00000021882	lsg1	88	74.667	Poecilia_formosa
ENSETEG00000003888	LSG1	87	77.966	ENSPLAG00000019536	lsg1	88	74.667	Poecilia_latipinna
ENSETEG00000003888	LSG1	87	77.966	ENSPMEG00000017281	lsg1	88	74.667	Poecilia_mexicana
ENSETEG00000003888	LSG1	87	77.966	ENSPREG00000006048	lsg1	87	74.667	Poecilia_reticulata
ENSETEG00000003888	LSG1	82	86.667	ENSPPYG00000014425	LSG1	87	86.667	Pongo_abelii
ENSETEG00000003888	LSG1	79	88.000	ENSPCAG00000005511	LSG1	77	88.000	Procavia_capensis
ENSETEG00000003888	LSG1	89	86.667	ENSPCOG00000012360	LSG1	88	86.667	Propithecus_coquereli
ENSETEG00000003888	LSG1	89	74.667	ENSPNYG00000021994	lsg1	88	74.667	Pundamilia_nyererei
ENSETEG00000003888	LSG1	89	73.333	ENSPNAG00000015533	lsg1	88	73.333	Pygocentrus_nattereri
ENSETEG00000003888	LSG1	89	88.000	ENSRNOG00000001727	Lsg1	88	88.000	Rattus_norvegicus
ENSETEG00000003888	LSG1	89	85.333	ENSRBIG00000029053	LSG1	88	85.333	Rhinopithecus_bieti
ENSETEG00000003888	LSG1	89	85.333	ENSRROG00000037702	LSG1	88	85.333	Rhinopithecus_roxellana
ENSETEG00000003888	LSG1	89	86.667	ENSSBOG00000034938	LSG1	88	86.667	Saimiri_boliviensis_boliviensis
ENSETEG00000003888	LSG1	78	60.487	ENSSHAG00000003487	LSG1	98	59.810	Sarcophilus_harrisii
ENSETEG00000003888	LSG1	87	67.742	ENSSFOG00015008955	lsg1	88	64.474	Scleropages_formosus
ENSETEG00000003888	LSG1	87	79.032	ENSSDUG00000004622	lsg1	88	76.000	Seriola_dumerili
ENSETEG00000003888	LSG1	87	79.032	ENSSLDG00000010869	lsg1	88	74.667	Seriola_lalandi_dorsalis
ENSETEG00000003888	LSG1	64	93.878	ENSSARG00000012981	LSG1	66	95.238	Sorex_araneus
ENSETEG00000003888	LSG1	89	72.368	ENSSPUG00000016347	LSG1	88	72.368	Sphenodon_punctatus
ENSETEG00000003888	LSG1	89	70.667	ENSSPAG00000005508	lsg1	91	70.667	Stegastes_partitus
ENSETEG00000003888	LSG1	89	86.667	ENSSSCG00000011827	LSG1	88	86.667	Sus_scrofa
ENSETEG00000003888	LSG1	78	59.125	ENSTGUG00000009068	LSG1	87	58.767	Taeniopygia_guttata
ENSETEG00000003888	LSG1	87	76.271	ENSTRUG00000017380	lsg1	87	72.000	Takifugu_rubripes
ENSETEG00000003888	LSG1	87	76.271	ENSTNIG00000015570	lsg1	87	73.333	Tetraodon_nigroviridis
ENSETEG00000003888	LSG1	76	86.667	ENSTTRG00000000559	LSG1	75	86.667	Tursiops_truncatus
ENSETEG00000003888	LSG1	89	85.333	ENSUAMG00000012454	LSG1	88	85.333	Ursus_americanus
ENSETEG00000003888	LSG1	89	85.333	ENSUMAG00000000855	LSG1	88	85.333	Ursus_maritimus
ENSETEG00000003888	LSG1	80	97.619	ENSVPAG00000012400	LSG1	84	97.619	Vicugna_pacos
ENSETEG00000003888	LSG1	84	95.238	ENSVVUG00000008956	LSG1	85	95.238	Vulpes_vulpes
ENSETEG00000003888	LSG1	89	74.667	ENSXETG00000003451	lsg1	88	74.667	Xenopus_tropicalis
ENSETEG00000003888	LSG1	87	77.966	ENSXCOG00000003239	lsg1	88	74.667	Xiphophorus_couchianus
ENSETEG00000003888	LSG1	87	77.966	ENSXMAG00000005536	lsg1	88	74.667	Xiphophorus_maculatus