EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSETEG00000003893 (Gene tree)
Gene ID
-
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Echinops_telfairi
Status
putative
Strand
Plus strand
Length
43229 bases
Position
chrGeneScaffold_5077:132078-175306
Accession
2326
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSETEP00000003197CPSF73-100_CPF11718.83.8e-4711
ENSETEP00000003197Beta-CaspPF10996.81.8e-3111
ENSETEP00000003197Lactamase_BPF00753.273.2e-1111
ENSETEP00000003197RMMBLPF07521.129.5e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSETET00000003895CPSF3-2011953-ENSETEP00000003197651 (aa)-UPI0000E43E97
Gene Model
Click here to download ENSETEG00000003893's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000003893's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSETEG00000003893CPSF310085.561ENSG00000119203CPSF389100.000Homo_sapiens
ENSETEG00000003893CPSF39974.383ENSAPOG00000022087cpsf39972.682Acanthochromis_polyacanthus
ENSETEG00000003893CPSF37880.237ENSAPOG00000012241CPSF38884.335Acanthochromis_polyacanthus
ENSETEG00000003893CPSF310085.868ENSAMEG00000008493CPSF39585.868Ailuropoda_melanoleuca
ENSETEG00000003893CPSF39277.926ENSACIG00000023663CPSF39477.926Amphilophus_citrinellus
ENSETEG00000003893CPSF39174.372ENSACIG00000009846cpsf39474.372Amphilophus_citrinellus
ENSETEG00000003893CPSF39974.383ENSAOCG00000022056cpsf39478.061Amphiprion_ocellaris
ENSETEG00000003893CPSF39976.852ENSAOCG00000010077CPSF39476.852Amphiprion_ocellaris
ENSETEG00000003893CPSF39976.852ENSAPEG00000021167CPSF39676.852Amphiprion_percula
ENSETEG00000003893CPSF39974.537ENSAPEG00000019526cpsf39774.537Amphiprion_percula
ENSETEG00000003893CPSF39974.228ENSATEG00000003959cpsf39474.372Anabas_testudineus
ENSETEG00000003893CPSF39972.222ENSATEG00000014525CPSF39372.222Anabas_testudineus
ENSETEG00000003893CPSF39486.134ENSAPLG00000006941CPSF39086.134Anas_platyrhynchos
ENSETEG00000003893CPSF39283.223ENSACAG00000001759CPSF39583.223Anolis_carolinensis
ENSETEG00000003893CPSF310078.802ENSANAG00000031254CPSF39578.802Aotus_nancymaae
ENSETEG00000003893CPSF39477.162ENSACLG00000014484cpsf39277.162Astatotilapia_calliptera
ENSETEG00000003893CPSF39277.759ENSACLG00000018846CPSF39477.759Astatotilapia_calliptera
ENSETEG00000003893CPSF39976.543ENSAMXG00000004786cpsf39476.543Astyanax_mexicanus
ENSETEG00000003893CPSF310085.714ENSBTAG00000019735CPSF39585.714Bos_taurus
ENSETEG00000003893CPSF39549.921WBGene00013460cpsf-38949.921Caenorhabditis_elegans
ENSETEG00000003893CPSF310085.868ENSCJAG00000006276CPSF39585.868Callithrix_jacchus
ENSETEG00000003893CPSF310085.868ENSCAFG00000003375CPSF39185.868Canis_familiaris
ENSETEG00000003893CPSF39586.268ENSCAFG00020026799CPSF310086.268Canis_lupus_dingo
ENSETEG00000003893CPSF310085.714ENSCHIG00000013973CPSF39585.714Capra_hircus
ENSETEG00000003893CPSF310085.561ENSTSYG00000002967CPSF39585.561Carlito_syrichta
ENSETEG00000003893CPSF39486.460ENSCAPG00000013851CPSF39286.460Cavia_aperea
ENSETEG00000003893CPSF310084.025ENSCPOG00000011299CPSF39584.025Cavia_porcellus
ENSETEG00000003893CPSF310085.714ENSCCAG00000036730CPSF39585.714Cebus_capucinus
ENSETEG00000003893CPSF310083.129ENSCATG00000014770CPSF39985.886Cercocebus_atys
ENSETEG00000003893CPSF310083.871ENSCLAG00000002727CPSF39583.871Chinchilla_lanigera
ENSETEG00000003893CPSF310077.419ENSCSAG00000007125CPSF39577.419Chlorocebus_sabaeus
ENSETEG00000003893CPSF37763.095ENSCHOG00000000180CPSF37663.095Choloepus_hoffmanni
ENSETEG00000003893CPSF39983.538ENSCPBG00000014074CPSF39483.538Chrysemys_picta_bellii
ENSETEG00000003893CPSF39958.679ENSCING00000007214-9458.679Ciona_intestinalis
ENSETEG00000003893CPSF310078.779ENSCANG00000034435CPSF39578.779Colobus_angolensis_palliatus
ENSETEG00000003893CPSF310085.561ENSCGRG00001013134Cpsf39585.561Cricetulus_griseus_chok1gshd
ENSETEG00000003893CPSF310085.561ENSCGRG00000018319Cpsf39585.561Cricetulus_griseus_crigri
ENSETEG00000003893CPSF39975.926ENSCSEG00000002021CPSF39578.467Cynoglossus_semilaevis
ENSETEG00000003893CPSF39977.006ENSCVAG00000015067CPSF39477.006Cyprinodon_variegatus
ENSETEG00000003893CPSF39977.778ENSDARG00000027649cpsf39477.778Danio_rerio
ENSETEG00000003893CPSF310084.049ENSDNOG00000008940CPSF39184.049Dasypus_novemcinctus
ENSETEG00000003893CPSF310085.714ENSDORG00000014263Cpsf310085.714Dipodomys_ordii
ENSETEG00000003893CPSF39958.398FBgn0261065Cpsf739458.398Drosophila_melanogaster
ENSETEG00000003893CPSF39970.943ENSEBUG00000009018cpsf39170.943Eptatretus_burgeri
ENSETEG00000003893CPSF310085.868ENSEASG00005003970CPSF39585.868Equus_asinus_asinus
ENSETEG00000003893CPSF310085.868ENSECAG00000019911CPSF39785.452Equus_caballus
ENSETEG00000003893CPSF310070.200ENSEEUG00000015422CPSF39570.200Erinaceus_europaeus
ENSETEG00000003893CPSF39976.425ENSELUG00000013775cpsf39576.325Esox_lucius
ENSETEG00000003893CPSF310085.714ENSFCAG00000007852CPSF39588.254Felis_catus
ENSETEG00000003893CPSF39485.971ENSFALG00000006572CPSF39585.971Ficedula_albicollis
ENSETEG00000003893CPSF310083.871ENSFDAG00000006317CPSF39483.871Fukomys_damarensis
ENSETEG00000003893CPSF35768.435ENSFHEG00000012186CPSF39168.435Fundulus_heteroclitus
ENSETEG00000003893CPSF39974.228ENSFHEG00000014774cpsf39474.228Fundulus_heteroclitus
ENSETEG00000003893CPSF39975.772ENSGMOG00000003157cpsf39475.772Gadus_morhua
ENSETEG00000003893CPSF39982.407ENSGALG00000016424CPSF39584.551Gallus_gallus
ENSETEG00000003893CPSF39977.469ENSGAFG00000008016CPSF39477.469Gambusia_affinis
ENSETEG00000003893CPSF39274.172ENSGAFG00000019449cpsf39574.172Gambusia_affinis
ENSETEG00000003893CPSF36294.030ENSGAGG00000025583CPSF38094.030Gopherus_agassizii
ENSETEG00000003893CPSF310083.784ENSGGOG00000001757CPSF39588.040Gorilla_gorilla
ENSETEG00000003893CPSF39974.769ENSHBUG00000001188cpsf39574.769Haplochromis_burtoni
ENSETEG00000003893CPSF35782.574ENSHBUG00000014332CPSF39282.574Haplochromis_burtoni
ENSETEG00000003893CPSF310083.871ENSHGLG00000000666CPSF39483.871Heterocephalus_glaber_female
ENSETEG00000003893CPSF310083.871ENSHGLG00100007765CPSF39483.871Heterocephalus_glaber_male
ENSETEG00000003893CPSF39974.154ENSHCOG00000007251cpsf39574.154Hippocampus_comes
ENSETEG00000003893CPSF39976.235ENSHCOG00000015957CPSF39376.235Hippocampus_comes
ENSETEG00000003893CPSF39975.617ENSIPUG00000023488cpsf39475.617Ictalurus_punctatus
ENSETEG00000003893CPSF310085.714ENSSTOG00000004476CPSF39585.714Ictidomys_tridecemlineatus
ENSETEG00000003893CPSF310084.639ENSJJAG00000023415Cpsf39584.639Jaculus_jaculus
ENSETEG00000003893CPSF39973.920ENSKMAG00000002806cpsf39473.920Kryptolebias_marmoratus
ENSETEG00000003893CPSF39976.543ENSKMAG00000007317CPSF39476.543Kryptolebias_marmoratus
ENSETEG00000003893CPSF39976.698ENSLBEG00000013492CPSF39876.698Labrus_bergylta
ENSETEG00000003893CPSF39671.108ENSLBEG00000020569cpsf39171.108Labrus_bergylta
ENSETEG00000003893CPSF35779.893ENSLBEG00000015018-9979.893Labrus_bergylta
ENSETEG00000003893CPSF39972.068ENSLACG00000008308CPSF39472.068Latimeria_chalumnae
ENSETEG00000003893CPSF39977.692ENSLOCG00000016823cpsf39477.692Lepisosteus_oculatus
ENSETEG00000003893CPSF39488.091ENSLAFG00000009467CPSF39088.091Loxodonta_africana
ENSETEG00000003893CPSF310085.561ENSMFAG00000001339CPSF39588.091Macaca_fascicularis
ENSETEG00000003893CPSF39488.091ENSMMUG00000018038CPSF39588.091Macaca_mulatta
ENSETEG00000003893CPSF38396.165ENSMNEG00000039447CPSF38796.165Macaca_nemestrina
ENSETEG00000003893CPSF310085.714ENSMLEG00000026825CPSF39585.714Mandrillus_leucophaeus
ENSETEG00000003893CPSF39276.667ENSMAMG00000008835CPSF39476.667Mastacembelus_armatus
ENSETEG00000003893CPSF39974.228ENSMAMG00000003076cpsf39476.302Mastacembelus_armatus
ENSETEG00000003893CPSF39977.469ENSMZEG00005006258CPSF39477.759Maylandia_zebra
ENSETEG00000003893CPSF39974.769ENSMZEG00005014358cpsf39574.769Maylandia_zebra
ENSETEG00000003893CPSF39484.992ENSMGAG00000013995CPSF39284.992Meleagris_gallopavo
ENSETEG00000003893CPSF35395.044ENSMAUG00000000166Cpsf39195.044Mesocricetus_auratus
ENSETEG00000003893CPSF39191.542ENSMICG00000002363CPSF38891.542Microcebus_murinus
ENSETEG00000003893CPSF39585.437ENSMOCG00000020067Cpsf39585.437Microtus_ochrogaster
ENSETEG00000003893CPSF39474.062ENSMMOG00000018212CPSF39474.062Mola_mola
ENSETEG00000003893CPSF37267.500ENSMMOG00000011923CPSF37867.500Mola_mola
ENSETEG00000003893CPSF310082.979ENSMODG00000014703CPSF39582.979Monodelphis_domestica
ENSETEG00000003893CPSF39077.234ENSMALG00000011474CPSF39677.234Monopterus_albus
ENSETEG00000003893CPSF39975.538ENSMALG00000016416cpsf39575.538Monopterus_albus
ENSETEG00000003893CPSF310085.407MGP_CAROLIEiJ_G0017640Cpsf39585.407Mus_caroli
ENSETEG00000003893CPSF310085.407ENSMUSG00000054309Cpsf39585.407Mus_musculus
ENSETEG00000003893CPSF310085.253MGP_PahariEiJ_G0029397Cpsf39585.253Mus_pahari
ENSETEG00000003893CPSF310085.407MGP_SPRETEiJ_G0018481Cpsf39585.407Mus_spretus
ENSETEG00000003893CPSF310085.561ENSMPUG00000013213CPSF39585.561Mustela_putorius_furo
ENSETEG00000003893CPSF310085.123ENSMLUG00000010636CPSF39585.123Myotis_lucifugus
ENSETEG00000003893CPSF310085.407ENSNGAG00000019836Cpsf39585.407Nannospalax_galili
ENSETEG00000003893CPSF39277.759ENSNBRG00000010525CPSF39477.759Neolamprologus_brichardi
ENSETEG00000003893CPSF39974.308ENSNBRG00000004770cpsf39574.308Neolamprologus_brichardi
ENSETEG00000003893CPSF310085.561ENSNLEG00000013359CPSF39588.091Nomascus_leucogenys
ENSETEG00000003893CPSF37878.758ENSMEUG00000013117-7478.758Notamacropus_eugenii
ENSETEG00000003893CPSF38395.575ENSOPRG00000008902CPSF37995.575Ochotona_princeps
ENSETEG00000003893CPSF310083.564ENSODEG00000003129CPSF39583.564Octodon_degus
ENSETEG00000003893CPSF39974.769ENSONIG00000018812cpsf39574.769Oreochromis_niloticus
ENSETEG00000003893CPSF38284.369ENSOANG00000008577CPSF39484.369Ornithorhynchus_anatinus
ENSETEG00000003893CPSF310085.253ENSOCUG00000003728CPSF39585.253Oryctolagus_cuniculus
ENSETEG00000003893CPSF39973.077ENSORLG00000018854cpsf39573.077Oryzias_latipes
ENSETEG00000003893CPSF39972.923ENSORLG00020013331cpsf39572.923Oryzias_latipes_hni
ENSETEG00000003893CPSF39973.077ENSORLG00015011017cpsf39573.077Oryzias_latipes_hsok
ENSETEG00000003893CPSF39972.923ENSOMEG00000010647cpsf39172.923Oryzias_melastigma
ENSETEG00000003893CPSF310075.422ENSOGAG00000001680CPSF39575.422Otolemur_garnettii
ENSETEG00000003893CPSF310085.714ENSOARG00000015073CPSF39585.714Ovis_aries
ENSETEG00000003893CPSF310085.714ENSPPAG00000042457CPSF39585.714Pan_paniscus
ENSETEG00000003893CPSF310085.714ENSPPRG00000016790CPSF39588.254Panthera_pardus
ENSETEG00000003893CPSF39985.626ENSPTIG00000003920CPSF39588.040Panthera_tigris_altaica
ENSETEG00000003893CPSF310085.714ENSPTRG00000011638CPSF39585.714Pan_troglodytes
ENSETEG00000003893CPSF310085.561ENSPANG00000016798CPSF39585.561Papio_anubis
ENSETEG00000003893CPSF39977.812ENSPKIG00000023646cpsf39580.261Paramormyrops_kingsleyae
ENSETEG00000003893CPSF39485.481ENSPSIG00000016144CPSF39085.481Pelodiscus_sinensis
ENSETEG00000003893CPSF38476.630ENSPMGG00000006141-9576.630Periophthalmus_magnuspinnatus
ENSETEG00000003893CPSF35779.893ENSPMGG00000015311CPSF39279.893Periophthalmus_magnuspinnatus
ENSETEG00000003893CPSF310085.100ENSPEMG00000017668Cpsf39585.100Peromyscus_maniculatus_bairdii
ENSETEG00000003893CPSF38275.605ENSPMAG00000004841cpsf39975.605Petromyzon_marinus
ENSETEG00000003893CPSF39486.623ENSPCIG00000009823CPSF39286.623Phascolarctos_cinereus
ENSETEG00000003893CPSF39974.000ENSPFOG00000015922cpsf39574.000Poecilia_formosa
ENSETEG00000003893CPSF39977.160ENSPFOG00000010418-9477.160Poecilia_formosa
ENSETEG00000003893CPSF35782.842ENSPLAG00000021300-9282.842Poecilia_latipinna
ENSETEG00000003893CPSF39974.000ENSPLAG00000000882cpsf39574.000Poecilia_latipinna
ENSETEG00000003893CPSF39974.154ENSPMEG00000018309cpsf39574.154Poecilia_mexicana
ENSETEG00000003893CPSF39273.675ENSPREG00000014875cpsf39573.675Poecilia_reticulata
ENSETEG00000003893CPSF39971.451ENSPREG00000004482CPSF39371.451Poecilia_reticulata
ENSETEG00000003893CPSF310084.793ENSPPYG00000012666CPSF39584.793Pongo_abelii
ENSETEG00000003893CPSF310069.432ENSPCAG00000015042CPSF310069.432Procavia_capensis
ENSETEG00000003893CPSF37582.759ENSPCOG00000023016CPSF37982.759Propithecus_coquereli
ENSETEG00000003893CPSF310085.868ENSPVAG00000005324CPSF39585.868Pteropus_vampyrus
ENSETEG00000003893CPSF39974.769ENSPNYG00000004405cpsf39574.769Pundamilia_nyererei
ENSETEG00000003893CPSF38380.663ENSPNYG00000021047CPSF39180.663Pundamilia_nyererei
ENSETEG00000003893CPSF39976.080ENSPNAG00000023060cpsf39476.214Pygocentrus_nattereri
ENSETEG00000003893CPSF310085.407ENSRNOG00000052418Cpsf39585.407Rattus_norvegicus
ENSETEG00000003893CPSF310081.260ENSRBIG00000041615CPSF39483.524Rhinopithecus_bieti
ENSETEG00000003893CPSF310085.714ENSRROG00000033792CPSF39585.714Rhinopithecus_roxellana
ENSETEG00000003893CPSF39435.146YLR277CYSH19235.146Saccharomyces_cerevisiae
ENSETEG00000003893CPSF39483.306ENSSBOG00000027263CPSF38983.306Saimiri_boliviensis_boliviensis
ENSETEG00000003893CPSF310084.178ENSSHAG00000007024CPSF39584.178Sarcophilus_harrisii
ENSETEG00000003893CPSF39977.538ENSSFOG00015002108cpsf39579.734Scleropages_formosus
ENSETEG00000003893CPSF39975.309ENSSMAG00000020534CPSF39575.309Scophthalmus_maximus
ENSETEG00000003893CPSF39974.462ENSSDUG00000002828cpsf39274.462Seriola_dumerili
ENSETEG00000003893CPSF39977.160ENSSDUG00000018498CPSF39477.425Seriola_dumerili
ENSETEG00000003893CPSF39977.160ENSSLDG00000005234CPSF39577.425Seriola_lalandi_dorsalis
ENSETEG00000003893CPSF39974.308ENSSLDG00000008469cpsf39177.458Seriola_lalandi_dorsalis
ENSETEG00000003893CPSF310071.275ENSSARG00000005186CPSF39571.275Sorex_araneus
ENSETEG00000003893CPSF39482.982ENSSPUG00000015525CPSF39082.982Sphenodon_punctatus
ENSETEG00000003893CPSF39974.691ENSSPAG00000018579cpsf39474.691Stegastes_partitus
ENSETEG00000003893CPSF39976.698ENSSPAG00000002906CPSF39576.923Stegastes_partitus
ENSETEG00000003893CPSF310085.714ENSSSCG00000020799CPSF39585.714Sus_scrofa
ENSETEG00000003893CPSF39983.488ENSTGUG00000013016CPSF39583.488Taeniopygia_guttata
ENSETEG00000003893CPSF35775.067ENSTRUG00000013905CPSF39175.067Takifugu_rubripes
ENSETEG00000003893CPSF39973.765ENSTRUG00000007030cpsf39077.005Takifugu_rubripes
ENSETEG00000003893CPSF38078.431ENSTBEG00000002707CPSF37578.431Tupaia_belangeri
ENSETEG00000003893CPSF38792.157ENSTTRG00000000861CPSF38392.157Tursiops_truncatus
ENSETEG00000003893CPSF310085.868ENSUAMG00000007535CPSF39485.868Ursus_americanus
ENSETEG00000003893CPSF39488.418ENSUMAG00000003676CPSF39588.418Ursus_maritimus
ENSETEG00000003893CPSF39484.502ENSVPAG00000008041CPSF39784.502Vicugna_pacos
ENSETEG00000003893CPSF310085.868ENSVVUG00000002194CPSF39585.868Vulpes_vulpes
ENSETEG00000003893CPSF39978.154ENSXETG00000008263cpsf39478.154Xenopus_tropicalis
ENSETEG00000003893CPSF35281.471ENSXCOG00000000957-7981.471Xiphophorus_couchianus
ENSETEG00000003893CPSF39974.308ENSXCOG00000019695cpsf39574.308Xiphophorus_couchianus
ENSETEG00000003893CPSF39977.315ENSXMAG00000027291CPSF39477.315Xiphophorus_maculatus
ENSETEG00000003893CPSF39974.000ENSXMAG00000009784cpsf39576.346Xiphophorus_maculatus

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