EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSETEG00000004129 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 885 bases
Position: chrscaffold_233066:5093-5977
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000003386	RRM_1	PF00076.22	4.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000004130	-	699	-	ENSETEP00000003386	232 (aa)	-	UPI0000E40884

Gene Model

Click here to download ENSETEG00000004129's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000004129's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSETEG00000004129	-	79	50.476	ENSETEG00000005742	-	79	50.476
ENSETEG00000004129	-	62	51.923	ENSETEG00000013689	-	63	49.296
ENSETEG00000004129	-	79	47.692	ENSETEG00000002921	-	79	47.692
ENSETEG00000004129	-	79	60.096	ENSETEG00000001872	-	80	61.058
ENSETEG00000004129	-	59	50.968	ENSETEG00000011678	-	92	48.701
ENSETEG00000004129	-	74	49.490	ENSETEG00000015984	-	78	48.276
ENSETEG00000004129	-	78	49.282	ENSETEG00000010244	-	79	49.756
ENSETEG00000004129	-	79	50.481	ENSETEG00000002004	-	77	51.020
ENSETEG00000004129	-	70	40.314	ENSETEG00000012195	-	73	42.541
ENSETEG00000004129	-	78	56.522	ENSETEG00000017761	-	79	56.522
ENSETEG00000004129	-	79	48.077	ENSETEG00000004547	-	80	48.077
ENSETEG00000004129	-	72	42.932	ENSETEG00000011413	-	74	45.509
ENSETEG00000004129	-	79	52.358	ENSETEG00000007429	-	80	50.943
ENSETEG00000004129	-	79	50.943	ENSETEG00000010614	-	81	52.358
ENSETEG00000004129	-	79	43.689	ENSETEG00000013374	-	80	43.689
ENSETEG00000004129	-	66	46.591	ENSETEG00000003702	-	65	45.283
ENSETEG00000004129	-	66	52.222	ENSETEG00000007747	-	69	51.777
ENSETEG00000004129	-	71	50.259	ENSETEG00000018577	HNRNPA2B1	55	50.515
ENSETEG00000004129	-	69	57.609	ENSETEG00000019833	-	81	57.619
ENSETEG00000004129	-	62	39.412	ENSETEG00000017220	-	67	39.412
ENSETEG00000004129	-	69	62.366	ENSETEG00000015332	-	79	63.462
ENSETEG00000004129	-	59	52.288	ENSETEG00000009031	-	75	50.000
ENSETEG00000004129	-	66	55.556	ENSETEG00000012394	-	78	56.311
ENSETEG00000004129	-	65	41.290	ENSETEG00000011155	-	61	40.000
ENSETEG00000004129	-	66	61.236	ENSETEG00000018059	-	76	62.312
ENSETEG00000004129	-	69	44.385	ENSETEG00000012879	-	75	46.226
ENSETEG00000004129	-	67	42.458	ENSETEG00000017485	-	76	43.716

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000004129	-	74	50.746	ENSAMEG00000002186	-	66	49.457	Ailuropoda_melanoleuca
ENSETEG00000004129	-	68	59.893	ENSCAFG00000017180	-	66	58.216	Canis_familiaris
ENSETEG00000004129	-	72	64.467	ENSCAFG00000006327	-	66	61.395	Canis_familiaris
ENSETEG00000004129	-	66	59.322	ENSCHIG00000020351	-	65	58.128	Capra_hircus
ENSETEG00000004129	-	60	53.988	ENSCGRG00001017212	-	57	49.479	Cricetulus_griseus_chok1gshd
ENSETEG00000004129	-	70	50.000	ENSDNOG00000030945	-	66	48.889	Dasypus_novemcinctus
ENSETEG00000004129	-	70	45.055	ENSDNOG00000039534	-	58	45.455	Dasypus_novemcinctus
ENSETEG00000004129	-	71	54.639	ENSDNOG00000048335	-	61	54.497	Dasypus_novemcinctus
ENSETEG00000004129	-	69	66.667	ENSDORG00000027821	-	67	64.651	Dipodomys_ordii
ENSETEG00000004129	-	69	66.667	ENSFDAG00000021342	-	67	64.651	Fukomys_damarensis
ENSETEG00000004129	-	69	66.667	ENSHGLG00000003139	HNRNPA1	67	64.651	Heterocephalus_glaber_female
ENSETEG00000004129	-	74	53.431	ENSHGLG00100017719	-	56	55.357	Heterocephalus_glaber_male
ENSETEG00000004129	-	69	66.667	ENSHGLG00100015974	HNRNPA1	67	64.651	Heterocephalus_glaber_male
ENSETEG00000004129	-	55	50.000	ENSSTOG00000034519	-	50	50.000	Ictidomys_tridecemlineatus
ENSETEG00000004129	-	71	54.444	ENSMNEG00000038539	-	58	51.741	Macaca_nemestrina
ENSETEG00000004129	-	65	56.742	ENSMPUG00000003127	-	62	57.282	Mustela_putorius_furo
ENSETEG00000004129	-	69	55.676	ENSMPUG00000008269	-	69	54.802	Mustela_putorius_furo
ENSETEG00000004129	-	67	46.584	ENSNLEG00000032512	-	51	44.000	Nomascus_leucogenys
ENSETEG00000004129	-	71	65.464	ENSOCUG00000028124	-	58	63.333	Oryctolagus_cuniculus
ENSETEG00000004129	-	66	48.851	ENSPTIG00000013949	-	56	48.851	Panthera_tigris_altaica
ENSETEG00000004129	-	57	65.101	ENSPANG00000017095	-	65	61.765	Papio_anubis
ENSETEG00000004129	-	73	60.804	ENSSFOG00015007588	-	52	62.434	Scleropages_formosus
ENSETEG00000004129	-	71	64.103	ENSTBEG00000012511	-	75	60.465	Tupaia_belangeri
ENSETEG00000004129	-	71	44.974	ENSTBEG00000007607	-	57	45.000	Tupaia_belangeri