EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSETEG00000004355 (Gene tree)
Gene ID: -
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 150150 bases
Position: chrGeneScaffold_3710:2476-152625
Accession: 14957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000003570	PUF	PF00806.19	8e-55	1	6
ENSETEP00000003570	PUF	PF00806.19	8e-55	2	6
ENSETEP00000003570	PUF	PF00806.19	8e-55	3	6
ENSETEP00000003570	PUF	PF00806.19	8e-55	4	6
ENSETEP00000003570	PUF	PF00806.19	8e-55	5	6
ENSETEP00000003570	PUF	PF00806.19	8e-55	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000004359	PUM1-201	3534	-	ENSETEP00000003570	1178 (aa)	-	UPI0000E42BD7

Gene Model

Click here to download ENSETEG00000004355's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000004355's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSETEG00000004355	PUM1	75	87.565	ENSETEG00000017683	PUM2	79	87.565

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000004355	PUM1	87	93.945	ENSG00000134644	PUM1	97	92.407	Homo_sapiens
ENSETEG00000004355	PUM1	87	78.495	ENSAPOG00000021632	pum1	98	77.957	Acanthochromis_polyacanthus
ENSETEG00000004355	PUM1	90	93.939	ENSAMEG00000017656	PUM1	88	93.939	Ailuropoda_melanoleuca
ENSETEG00000004355	PUM1	87	71.511	ENSACIG00000021013	pum1	90	73.391	Amphilophus_citrinellus
ENSETEG00000004355	PUM1	87	78.495	ENSAOCG00000003944	pum1	98	68.352	Amphiprion_ocellaris
ENSETEG00000004355	PUM1	87	78.495	ENSAPEG00000014550	pum1	98	68.352	Amphiprion_percula
ENSETEG00000004355	PUM1	87	78.495	ENSATEG00000016004	pum1	98	77.957	Anabas_testudineus
ENSETEG00000004355	PUM1	87	92.390	ENSAPLG00000009351	PUM1	88	92.390	Anas_platyrhynchos
ENSETEG00000004355	PUM1	87	90.820	ENSACAG00000000682	PUM1	86	90.723	Anolis_carolinensis
ENSETEG00000004355	PUM1	87	93.561	ENSANAG00000027865	PUM1	85	100.000	Aotus_nancymaae
ENSETEG00000004355	PUM1	87	71.139	ENSACLG00000019354	pum1	98	72.832	Astatotilapia_calliptera
ENSETEG00000004355	PUM1	87	76.163	ENSAMXG00000020607	pum1	86	75.097	Astyanax_mexicanus
ENSETEG00000004355	PUM1	87	93.848	ENSBTAG00000018979	PUM1	85	100.000	Bos_taurus
ENSETEG00000004355	PUM1	87	93.561	ENSCJAG00000006035	PUM1	85	100.000	Callithrix_jacchus
ENSETEG00000004355	PUM1	87	91.024	ENSCAFG00000011205	PUM1	88	91.024	Canis_familiaris
ENSETEG00000004355	PUM1	87	93.294	ENSCAFG00020024616	PUM1	95	100.000	Canis_lupus_dingo
ENSETEG00000004355	PUM1	87	93.848	ENSCHIG00000012952	PUM1	87	95.349	Capra_hircus
ENSETEG00000004355	PUM1	87	93.561	ENSTSYG00000008868	PUM1	85	100.000	Carlito_syrichta
ENSETEG00000004355	PUM1	87	93.366	ENSCPOG00000031613	PUM1	85	100.000	Cavia_porcellus
ENSETEG00000004355	PUM1	87	91.309	ENSCATG00000017991	PUM1	85	100.000	Cercocebus_atys
ENSETEG00000004355	PUM1	87	93.463	ENSCLAG00000007662	PUM1	85	100.000	Chinchilla_lanigera
ENSETEG00000004355	PUM1	87	92.857	ENSCSAG00000001028	PUM1	88	92.857	Chlorocebus_sabaeus
ENSETEG00000004355	PUM1	72	95.122	ENSCHOG00000010245	PUM1	79	95.122	Choloepus_hoffmanni
ENSETEG00000004355	PUM1	87	92.871	ENSCPBG00000009288	PUM1	97	90.998	Chrysemys_picta_bellii
ENSETEG00000004355	PUM1	87	93.945	ENSCANG00000042606	PUM1	85	100.000	Colobus_angolensis_palliatus
ENSETEG00000004355	PUM1	87	93.262	ENSCGRG00001024949	Pum1	85	100.000	Cricetulus_griseus_chok1gshd
ENSETEG00000004355	PUM1	87	93.262	ENSCGRG00000014197	Pum1	85	100.000	Cricetulus_griseus_crigri
ENSETEG00000004355	PUM1	87	70.588	ENSCSEG00000015981	pum1	98	72.158	Cynoglossus_semilaevis
ENSETEG00000004355	PUM1	87	70.645	ENSCVAG00000007043	pum1	90	72.238	Cyprinodon_variegatus
ENSETEG00000004355	PUM1	87	75.969	ENSDARG00000099256	pum1	90	74.508	Danio_rerio
ENSETEG00000004355	PUM1	87	93.463	ENSDNOG00000010939	PUM1	88	93.463	Dasypus_novemcinctus
ENSETEG00000004355	PUM1	82	93.155	ENSDORG00000001875	Pum1	98	93.212	Dipodomys_ordii
ENSETEG00000004355	PUM1	87	93.555	ENSEASG00005010813	PUM1	88	93.555	Equus_asinus_asinus
ENSETEG00000004355	PUM1	87	93.366	ENSECAG00000021369	PUM1	88	93.366	Equus_caballus
ENSETEG00000004355	PUM1	63	98.851	ENSEEUG00000003871	PUM1	65	98.851	Erinaceus_europaeus
ENSETEG00000004355	PUM1	87	73.403	ENSELUG00000002409	pum1	87	100.000	Esox_lucius
ENSETEG00000004355	PUM1	87	93.854	ENSFCAG00000010374	PUM1	85	100.000	Felis_catus
ENSETEG00000004355	PUM1	87	90.874	ENSFALG00000001214	PUM1	85	89.709	Ficedula_albicollis
ENSETEG00000004355	PUM1	87	93.366	ENSFDAG00000011319	PUM1	85	100.000	Fukomys_damarensis
ENSETEG00000004355	PUM1	87	92.585	ENSGALG00000042598	PUM1	86	96.795	Gallus_gallus
ENSETEG00000004355	PUM1	87	75.000	ENSGAFG00000015617	pum1	98	77.151	Gambusia_affinis
ENSETEG00000004355	PUM1	87	71.716	ENSGACG00000005717	pum1	90	72.334	Gasterosteus_aculeatus
ENSETEG00000004355	PUM1	87	92.585	ENSGAGG00000001290	PUM1	97	92.585	Gopherus_agassizii
ENSETEG00000004355	PUM1	87	93.945	ENSGGOG00000011983	PUM1	85	100.000	Gorilla_gorilla
ENSETEG00000004355	PUM1	87	71.319	ENSHBUG00000018718	pum1	90	73.007	Haplochromis_burtoni
ENSETEG00000004355	PUM1	87	93.366	ENSHGLG00000013819	Pum1	85	100.000	Heterocephalus_glaber_female
ENSETEG00000004355	PUM1	87	93.366	ENSHGLG00100008621	Pum1	85	100.000	Heterocephalus_glaber_male
ENSETEG00000004355	PUM1	87	69.817	ENSHCOG00000005149	pum1	98	68.979	Hippocampus_comes
ENSETEG00000004355	PUM1	87	74.470	ENSIPUG00000020421	pum1	98	69.787	Ictalurus_punctatus
ENSETEG00000004355	PUM1	87	93.652	ENSSTOG00000010757	PUM1	85	100.000	Ictidomys_tridecemlineatus
ENSETEG00000004355	PUM1	87	93.262	ENSJJAG00000000530	Pum1	85	100.000	Jaculus_jaculus
ENSETEG00000004355	PUM1	87	70.934	ENSKMAG00000003481	pum1	90	72.526	Kryptolebias_marmoratus
ENSETEG00000004355	PUM1	87	70.588	ENSLBEG00000002527	pum1	90	72.377	Labrus_bergylta
ENSETEG00000004355	PUM1	87	82.267	ENSLACG00000017188	PUM1	88	82.267	Latimeria_chalumnae
ENSETEG00000004355	PUM1	87	84.563	ENSLOCG00000005210	pum1	88	84.660	Lepisosteus_oculatus
ENSETEG00000004355	PUM1	87	93.659	ENSLAFG00000003178	PUM1	88	93.659	Loxodonta_africana
ENSETEG00000004355	PUM1	87	93.945	ENSMFAG00000010291	PUM1	85	100.000	Macaca_fascicularis
ENSETEG00000004355	PUM1	87	93.489	ENSMMUG00000013520	PUM1	85	100.000	Macaca_mulatta
ENSETEG00000004355	PUM1	87	93.945	ENSMNEG00000034639	PUM1	85	100.000	Macaca_nemestrina
ENSETEG00000004355	PUM1	87	93.945	ENSMLEG00000038743	PUM1	85	100.000	Mandrillus_leucophaeus
ENSETEG00000004355	PUM1	87	71.415	ENSMAMG00000011606	pum1	98	70.270	Mastacembelus_armatus
ENSETEG00000004355	PUM1	87	71.319	ENSMZEG00005005834	pum1	90	73.007	Maylandia_zebra
ENSETEG00000004355	PUM1	87	92.293	ENSMGAG00000000724	PUM1	88	92.293	Meleagris_gallopavo
ENSETEG00000004355	PUM1	87	93.268	ENSMAUG00000022090	Pum1	85	100.000	Mesocricetus_auratus
ENSETEG00000004355	PUM1	87	91.610	ENSMICG00000012213	-	87	93.201	Microcebus_murinus
ENSETEG00000004355	PUM1	87	93.561	ENSMICG00000007713	-	85	100.000	Microcebus_murinus
ENSETEG00000004355	PUM1	87	93.171	ENSMOCG00000015463	Pum1	85	100.000	Microtus_ochrogaster
ENSETEG00000004355	PUM1	87	75.510	ENSMMOG00000019817	pum1	98	77.688	Mola_mola
ENSETEG00000004355	PUM1	87	92.780	ENSMODG00000017067	PUM1	88	92.780	Monodelphis_domestica
ENSETEG00000004355	PUM1	87	92.773	MGP_CAROLIEiJ_G0026549	Pum1	88	92.773	Mus_caroli
ENSETEG00000004355	PUM1	87	93.066	ENSMUSG00000028580	Pum1	85	100.000	Mus_musculus
ENSETEG00000004355	PUM1	87	92.871	MGP_PahariEiJ_G0028881	Pum1	85	100.000	Mus_pahari
ENSETEG00000004355	PUM1	87	92.969	MGP_SPRETEiJ_G0027529	Pum1	85	100.000	Mus_spretus
ENSETEG00000004355	PUM1	87	93.359	ENSMPUG00000015454	PUM1	88	93.359	Mustela_putorius_furo
ENSETEG00000004355	PUM1	87	93.561	ENSMLUG00000006490	PUM1	88	93.561	Myotis_lucifugus
ENSETEG00000004355	PUM1	87	93.555	ENSNGAG00000002378	Pum1	85	100.000	Nannospalax_galili
ENSETEG00000004355	PUM1	64	74.379	ENSNBRG00000010689	pum1	86	100.000	Neolamprologus_brichardi
ENSETEG00000004355	PUM1	87	92.383	ENSNLEG00000001151	PUM1	85	100.000	Nomascus_leucogenys
ENSETEG00000004355	PUM1	66	100.000	ENSMEUG00000000976	-	65	100.000	Notamacropus_eugenii
ENSETEG00000004355	PUM1	67	98.598	ENSOPRG00000001776	PUM1	58	98.598	Ochotona_princeps
ENSETEG00000004355	PUM1	87	93.457	ENSODEG00000003465	PUM1	85	100.000	Octodon_degus
ENSETEG00000004355	PUM1	87	71.729	ENSONIG00000002290	pum1	90	73.391	Oreochromis_niloticus
ENSETEG00000004355	PUM1	78	97.826	ENSOANG00000004902	-	92	97.826	Ornithorhynchus_anatinus
ENSETEG00000004355	PUM1	87	93.463	ENSOCUG00000008641	PUM1	88	93.463	Oryctolagus_cuniculus
ENSETEG00000004355	PUM1	87	71.237	ENSORLG00000011482	pum1	90	72.727	Oryzias_latipes
ENSETEG00000004355	PUM1	87	71.333	ENSORLG00020019461	pum1	90	72.727	Oryzias_latipes_hni
ENSETEG00000004355	PUM1	87	71.333	ENSORLG00015011375	pum1	90	72.823	Oryzias_latipes_hsok
ENSETEG00000004355	PUM1	87	77.688	ENSOMEG00000009312	pum1	51	65.474	Oryzias_melastigma
ENSETEG00000004355	PUM1	87	90.458	ENSOGAG00000011063	PUM1	86	90.458	Otolemur_garnettii
ENSETEG00000004355	PUM1	87	92.780	ENSOARG00000001899	PUM1	87	95.191	Ovis_aries
ENSETEG00000004355	PUM1	87	93.945	ENSPPAG00000044003	PUM1	85	100.000	Pan_paniscus
ENSETEG00000004355	PUM1	87	93.945	ENSPPRG00000001370	PUM1	85	100.000	Panthera_pardus
ENSETEG00000004355	PUM1	87	93.750	ENSPTIG00000010798	PUM1	85	100.000	Panthera_tigris_altaica
ENSETEG00000004355	PUM1	87	93.945	ENSPTRG00000000453	PUM1	85	100.000	Pan_troglodytes
ENSETEG00000004355	PUM1	87	93.945	ENSPANG00000016338	PUM1	85	100.000	Papio_anubis
ENSETEG00000004355	PUM1	82	81.402	ENSPKIG00000010578	pum1	90	81.402	Paramormyrops_kingsleyae
ENSETEG00000004355	PUM1	87	92.969	ENSPSIG00000014118	PUM1	88	92.969	Pelodiscus_sinensis
ENSETEG00000004355	PUM1	64	72.704	ENSPMGG00000005836	pum1	87	100.000	Periophthalmus_magnuspinnatus
ENSETEG00000004355	PUM1	87	93.171	ENSPEMG00000010009	Pum1	85	100.000	Peromyscus_maniculatus_bairdii
ENSETEG00000004355	PUM1	87	92.976	ENSPCIG00000014151	PUM1	85	100.000	Phascolarctos_cinereus
ENSETEG00000004355	PUM1	87	72.579	ENSPFOG00000007289	pum1	96	73.486	Poecilia_formosa
ENSETEG00000004355	PUM1	87	70.205	ENSPLAG00000007256	pum1	91	71.258	Poecilia_latipinna
ENSETEG00000004355	PUM1	87	71.662	ENSPMEG00000019543	pum1	97	72.046	Poecilia_mexicana
ENSETEG00000004355	PUM1	87	71.415	ENSPREG00000005195	pum1	90	72.526	Poecilia_reticulata
ENSETEG00000004355	PUM1	87	91.794	ENSPPYG00000001621	PUM1	88	91.794	Pongo_abelii
ENSETEG00000004355	PUM1	64	98.681	ENSPCAG00000001979	PUM1	65	98.681	Procavia_capensis
ENSETEG00000004355	PUM1	87	93.561	ENSPCOG00000004398	PUM1	85	100.000	Propithecus_coquereli
ENSETEG00000004355	PUM1	87	93.555	ENSPVAG00000005207	PUM1	84	93.555	Pteropus_vampyrus
ENSETEG00000004355	PUM1	82	76.882	ENSPNYG00000009518	pum1	98	76.344	Pundamilia_nyererei
ENSETEG00000004355	PUM1	87	76.260	ENSPNAG00000026728	pum1	89	75.291	Pygocentrus_nattereri
ENSETEG00000004355	PUM1	87	93.066	ENSRNOG00000011709	Pum1	88	93.066	Rattus_norvegicus
ENSETEG00000004355	PUM1	87	93.945	ENSRBIG00000042521	PUM1	85	100.000	Rhinopithecus_bieti
ENSETEG00000004355	PUM1	87	93.945	ENSRROG00000020156	PUM1	85	100.000	Rhinopithecus_roxellana
ENSETEG00000004355	PUM1	87	93.659	ENSSBOG00000032037	PUM1	85	100.000	Saimiri_boliviensis_boliviensis
ENSETEG00000004355	PUM1	87	92.780	ENSSHAG00000010918	PUM1	88	92.780	Sarcophilus_harrisii
ENSETEG00000004355	PUM1	87	75.765	ENSSMAG00000010918	pum1	98	77.957	Scophthalmus_maximus
ENSETEG00000004355	PUM1	87	71.415	ENSSDUG00000009021	pum1	90	73.295	Seriola_dumerili
ENSETEG00000004355	PUM1	82	69.891	ENSSLDG00000009667	pum1	89	71.800	Seriola_lalandi_dorsalis
ENSETEG00000004355	PUM1	81	98.095	ENSSARG00000003055	PUM1	82	98.095	Sorex_araneus
ENSETEG00000004355	PUM1	87	92.090	ENSSPUG00000006267	PUM1	88	92.090	Sphenodon_punctatus
ENSETEG00000004355	PUM1	87	78.495	ENSSPAG00000016636	pum1	98	68.352	Stegastes_partitus
ENSETEG00000004355	PUM1	87	93.951	ENSSSCG00000003591	PUM1	86	98.319	Sus_scrofa
ENSETEG00000004355	PUM1	87	71.195	ENSTRUG00000013121	pum1	87	100.000	Takifugu_rubripes
ENSETEG00000004355	PUM1	87	71.030	ENSTNIG00000016983	pum1	89	72.719	Tetraodon_nigroviridis
ENSETEG00000004355	PUM1	72	92.911	ENSTBEG00000013810	PUM1	73	92.911	Tupaia_belangeri
ENSETEG00000004355	PUM1	89	93.945	ENSTTRG00000007436	PUM1	85	93.945	Tursiops_truncatus
ENSETEG00000004355	PUM1	87	93.250	ENSUAMG00000018262	-	89	93.250	Ursus_americanus
ENSETEG00000004355	PUM1	82	95.645	ENSUMAG00000009211	PUM1	87	95.183	Ursus_maritimus
ENSETEG00000004355	PUM1	79	98.276	ENSVPAG00000005902	PUM1	80	98.276	Vicugna_pacos
ENSETEG00000004355	PUM1	87	93.659	ENSVVUG00000014631	PUM1	87	95.025	Vulpes_vulpes
ENSETEG00000004355	PUM1	87	83.723	ENSXETG00000012904	pum1	87	82.749	Xenopus_tropicalis
ENSETEG00000004355	PUM1	87	70.549	ENSXMAG00000002945	pum1	92	72.334	Xiphophorus_maculatus