EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000004855 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 2094 bases
Position: chrGeneScaffold_1142:41925-44018
Accession: 101650609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000003966	Exo_endo_phos	PF03372.23	1.4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000004854	-	957	XM_004698434	ENSETEP00000003966	318 (aa)	XP_004698491	UPI0000E43F9B

Gene Model

Click here to download ENSETEG00000004855's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000004855's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000004855	-	100	93.711	ENSG00000100823	APEX1	100	93.711	Homo_sapiens
ENSETEG00000004855	-	88	69.534	ENSAPOG00000017002	apex1	91	69.534	Acanthochromis_polyacanthus
ENSETEG00000004855	-	100	94.969	ENSAMEG00000005418	APEX1	100	94.969	Ailuropoda_melanoleuca
ENSETEG00000004855	-	87	71.223	ENSACIG00000010653	apex1	94	71.326	Amphilophus_citrinellus
ENSETEG00000004855	-	88	69.534	ENSAOCG00000009649	apex1	90	69.534	Amphiprion_ocellaris
ENSETEG00000004855	-	88	69.534	ENSAPEG00000021453	apex1	90	69.534	Amphiprion_percula
ENSETEG00000004855	-	86	71.533	ENSATEG00000002883	apex1	97	67.405	Anabas_testudineus
ENSETEG00000004855	-	100	70.186	ENSACAG00000008099	APEX1	100	70.186	Anolis_carolinensis
ENSETEG00000004855	-	100	94.025	ENSANAG00000030117	APEX1	100	94.025	Aotus_nancymaae
ENSETEG00000004855	-	86	71.636	ENSACLG00000018441	apex1	99	66.772	Astatotilapia_calliptera
ENSETEG00000004855	-	100	66.250	ENSAMXG00000034699	apex1	100	65.312	Astyanax_mexicanus
ENSETEG00000004855	-	100	93.711	ENSBTAG00000002745	APEX1	100	93.711	Bos_taurus
ENSETEG00000004855	-	80	44.531	WBGene00001372	exo-3	88	44.531	Caenorhabditis_elegans
ENSETEG00000004855	-	100	94.654	ENSCJAG00000009726	APEX1	100	94.654	Callithrix_jacchus
ENSETEG00000004855	-	100	93.396	ENSCAFG00000032033	APEX1	100	93.396	Canis_familiaris
ENSETEG00000004855	-	100	93.396	ENSCAFG00020014377	-	100	93.396	Canis_lupus_dingo
ENSETEG00000004855	-	54	90.698	ENSCAFG00020023002	-	96	90.698	Canis_lupus_dingo
ENSETEG00000004855	-	98	75.641	ENSCHIG00000014537	-	99	75.641	Capra_hircus
ENSETEG00000004855	-	100	93.082	ENSCHIG00000007298	-	100	93.082	Capra_hircus
ENSETEG00000004855	-	100	93.711	ENSTSYG00000034813	APEX1	100	93.711	Carlito_syrichta
ENSETEG00000004855	-	85	86.347	ENSCAPG00000016235	APEX1	91	94.915	Cavia_aperea
ENSETEG00000004855	-	100	93.711	ENSCPOG00000030909	APEX1	100	93.711	Cavia_porcellus
ENSETEG00000004855	-	100	81.132	ENSCCAG00000031931	-	100	81.132	Cebus_capucinus
ENSETEG00000004855	-	100	94.654	ENSCCAG00000033056	-	100	94.654	Cebus_capucinus
ENSETEG00000004855	-	100	93.396	ENSCATG00000015580	APEX1	100	93.396	Cercocebus_atys
ENSETEG00000004855	-	100	93.396	ENSCLAG00000001002	APEX1	100	93.396	Chinchilla_lanigera
ENSETEG00000004855	-	100	93.082	ENSCSAG00000016685	-	100	93.082	Chlorocebus_sabaeus
ENSETEG00000004855	-	100	93.082	ENSCSAG00000016670	-	100	93.082	Chlorocebus_sabaeus
ENSETEG00000004855	-	100	71.473	ENSCPBG00000009567	APEX1	100	71.473	Chrysemys_picta_bellii
ENSETEG00000004855	-	83	60.000	ENSCING00000008137	-	84	60.000	Ciona_intestinalis
ENSETEG00000004855	-	93	48.232	ENSCSAVG00000007144	-	100	54.054	Ciona_savignyi
ENSETEG00000004855	-	100	93.396	ENSCANG00000030726	APEX1	100	93.396	Colobus_angolensis_palliatus
ENSETEG00000004855	-	100	90.881	ENSCGRG00001017046	Apex1	100	90.881	Cricetulus_griseus_chok1gshd
ENSETEG00000004855	-	100	90.881	ENSCGRG00000008984	Apex1	100	90.881	Cricetulus_griseus_crigri
ENSETEG00000004855	-	99	64.465	ENSCSEG00000017499	apex1	99	64.151	Cynoglossus_semilaevis
ENSETEG00000004855	-	99	67.089	ENSCVAG00000022075	apex1	99	67.089	Cyprinodon_variegatus
ENSETEG00000004855	-	100	66.667	ENSDARG00000045843	apex1	100	66.667	Danio_rerio
ENSETEG00000004855	-	100	90.252	ENSDNOG00000042234	APEX1	95	90.252	Dasypus_novemcinctus
ENSETEG00000004855	-	100	94.025	ENSDORG00000001616	Apex1	100	94.025	Dipodomys_ordii
ENSETEG00000004855	-	75	64.854	ENSEBUG00000000622	-	92	64.854	Eptatretus_burgeri
ENSETEG00000004855	-	100	94.969	ENSEASG00005017489	APEX1	74	94.969	Equus_asinus_asinus
ENSETEG00000004855	-	100	94.969	ENSECAG00000022325	APEX1	82	94.969	Equus_caballus
ENSETEG00000004855	-	91	92.361	ENSEEUG00000012569	APEX1	100	92.361	Erinaceus_europaeus
ENSETEG00000004855	-	100	65.723	ENSELUG00000021706	apex1	100	66.667	Esox_lucius
ENSETEG00000004855	-	100	94.969	ENSFCAG00000030869	APEX1	100	94.969	Felis_catus
ENSETEG00000004855	-	100	93.082	ENSFDAG00000006120	APEX1	100	93.082	Fukomys_damarensis
ENSETEG00000004855	-	99	68.038	ENSFHEG00000009031	apex1	83	68.038	Fundulus_heteroclitus
ENSETEG00000004855	-	99	61.321	ENSGMOG00000007943	apex1	99	61.076	Gadus_morhua
ENSETEG00000004855	-	88	71.685	ENSGAFG00000005311	apex1	99	67.089	Gambusia_affinis
ENSETEG00000004855	-	99	65.506	ENSGACG00000019497	apex1	99	69.549	Gasterosteus_aculeatus
ENSETEG00000004855	-	100	71.160	ENSGAGG00000014999	APEX1	100	71.160	Gopherus_agassizii
ENSETEG00000004855	-	100	94.025	ENSGGOG00000002128	APEX1	100	94.025	Gorilla_gorilla
ENSETEG00000004855	-	99	65.823	ENSHBUG00000005894	apex1	99	66.139	Haplochromis_burtoni
ENSETEG00000004855	-	100	93.396	ENSHGLG00000002848	APEX1	100	93.396	Heterocephalus_glaber_female
ENSETEG00000004855	-	100	93.396	ENSHGLG00100017878	APEX1	100	93.396	Heterocephalus_glaber_male
ENSETEG00000004855	-	99	66.038	ENSHCOG00000009961	apex1	99	65.723	Hippocampus_comes
ENSETEG00000004855	-	100	68.339	ENSIPUG00000005799	apex1	100	67.398	Ictalurus_punctatus
ENSETEG00000004855	-	100	92.453	ENSSTOG00000010096	APEX1	100	92.453	Ictidomys_tridecemlineatus
ENSETEG00000004855	-	100	93.396	ENSJJAG00000012067	-	100	93.396	Jaculus_jaculus
ENSETEG00000004855	-	94	84.564	ENSJJAG00000020465	-	96	84.564	Jaculus_jaculus
ENSETEG00000004855	-	100	83.962	ENSJJAG00000003660	-	100	83.962	Jaculus_jaculus
ENSETEG00000004855	-	99	66.772	ENSKMAG00000021171	apex1	99	66.772	Kryptolebias_marmoratus
ENSETEG00000004855	-	88	68.459	ENSLBEG00000010248	apex1	99	64.669	Labrus_bergylta
ENSETEG00000004855	-	100	67.500	ENSLACG00000008617	APEX1	100	67.296	Latimeria_chalumnae
ENSETEG00000004855	-	100	66.149	ENSLOCG00000015516	apex1	99	66.038	Lepisosteus_oculatus
ENSETEG00000004855	-	100	94.025	ENSLAFG00000021872	APEX1	100	94.025	Loxodonta_africana
ENSETEG00000004855	-	100	93.396	ENSMFAG00000002565	APEX1	100	93.396	Macaca_fascicularis
ENSETEG00000004855	-	100	93.396	ENSMMUG00000048039	APEX1	100	93.396	Macaca_mulatta
ENSETEG00000004855	-	100	93.396	ENSMNEG00000036944	APEX1	100	93.396	Macaca_nemestrina
ENSETEG00000004855	-	100	93.396	ENSMLEG00000042125	APEX1	100	93.396	Mandrillus_leucophaeus
ENSETEG00000004855	-	99	66.877	ENSMAMG00000023526	apex1	99	67.192	Mastacembelus_armatus
ENSETEG00000004855	-	86	71.636	ENSMZEG00005014187	apex1	99	66.772	Maylandia_zebra
ENSETEG00000004855	-	100	91.824	ENSMAUG00000013994	Apex1	100	91.824	Mesocricetus_auratus
ENSETEG00000004855	-	100	94.654	ENSMICG00000043554	APEX1	100	94.654	Microcebus_murinus
ENSETEG00000004855	-	100	92.138	ENSMOCG00000013721	Apex1	100	92.138	Microtus_ochrogaster
ENSETEG00000004855	-	88	67.500	ENSMMOG00000010031	apex1	97	62.382	Mola_mola
ENSETEG00000004855	-	100	84.375	ENSMODG00000007125	APEX1	100	84.688	Monodelphis_domestica
ENSETEG00000004855	-	88	64.158	ENSMALG00000011699	apex1	75	64.158	Monopterus_albus
ENSETEG00000004855	-	99	93.375	MGP_CAROLIEiJ_G0019209	Apex1	99	93.375	Mus_caroli
ENSETEG00000004855	-	100	93.396	ENSMUSG00000035960	Apex1	100	93.396	Mus_musculus
ENSETEG00000004855	-	100	93.396	MGP_PahariEiJ_G0030232	Apex1	100	93.396	Mus_pahari
ENSETEG00000004855	-	100	93.396	MGP_SPRETEiJ_G0020101	Apex1	100	93.396	Mus_spretus
ENSETEG00000004855	-	100	94.688	ENSMLUG00000028957	APEX1	100	94.375	Myotis_lucifugus
ENSETEG00000004855	-	100	91.824	ENSNGAG00000002725	-	100	91.824	Nannospalax_galili
ENSETEG00000004855	-	97	70.455	ENSNGAG00000021748	-	95	70.455	Nannospalax_galili
ENSETEG00000004855	-	86	71.273	ENSNBRG00000005334	apex1	91	66.456	Neolamprologus_brichardi
ENSETEG00000004855	-	100	93.711	ENSNLEG00000010839	APEX1	100	93.711	Nomascus_leucogenys
ENSETEG00000004855	-	100	87.421	ENSMEUG00000014519	APEX1	100	86.207	Notamacropus_eugenii
ENSETEG00000004855	-	100	92.767	ENSOPRG00000014029	APEX1	100	92.138	Ochotona_princeps
ENSETEG00000004855	-	97	75.081	ENSODEG00000004777	-	99	75.081	Octodon_degus
ENSETEG00000004855	-	100	93.711	ENSODEG00000001703	-	100	93.711	Octodon_degus
ENSETEG00000004855	-	100	70.988	ENSODEG00000006583	-	100	70.988	Octodon_degus
ENSETEG00000004855	-	87	71.583	ENSONIG00000012089	apex1	99	67.089	Oreochromis_niloticus
ENSETEG00000004855	-	90	82.456	ENSOANG00000008836	APEX1	80	77.469	Ornithorhynchus_anatinus
ENSETEG00000004855	-	100	93.711	ENSOCUG00000005022	APEX1	100	93.711	Oryctolagus_cuniculus
ENSETEG00000004855	-	99	67.296	ENSORLG00000012378	apex1	99	67.296	Oryzias_latipes
ENSETEG00000004855	-	99	67.296	ENSORLG00020021371	apex1	99	67.296	Oryzias_latipes_hni
ENSETEG00000004855	-	99	67.296	ENSORLG00015020089	apex1	99	67.296	Oryzias_latipes_hsok
ENSETEG00000004855	-	99	66.667	ENSOMEG00000018876	apex1	99	66.981	Oryzias_melastigma
ENSETEG00000004855	-	98	83.013	ENSOGAG00000029355	-	100	83.013	Otolemur_garnettii
ENSETEG00000004855	-	100	93.711	ENSOGAG00000013335	-	100	93.711	Otolemur_garnettii
ENSETEG00000004855	-	99	79.114	ENSOARG00000014424	-	100	78.797	Ovis_aries
ENSETEG00000004855	-	100	92.453	ENSOARG00000019740	-	100	92.453	Ovis_aries
ENSETEG00000004855	-	97	89.610	ENSOARG00000001876	-	100	89.610	Ovis_aries
ENSETEG00000004855	-	100	94.025	ENSPPAG00000038760	APEX1	100	94.025	Pan_paniscus
ENSETEG00000004855	-	100	94.654	ENSPPRG00000011794	APEX1	100	94.654	Panthera_pardus
ENSETEG00000004855	-	100	94.969	ENSPTIG00000014829	APEX1	100	94.969	Panthera_tigris_altaica
ENSETEG00000004855	-	100	94.025	ENSPTRG00000006093	APEX1	100	94.025	Pan_troglodytes
ENSETEG00000004855	-	100	93.396	ENSPANG00000022757	APEX1	100	93.396	Papio_anubis
ENSETEG00000004855	-	87	68.592	ENSPKIG00000003504	apex1	100	64.174	Paramormyrops_kingsleyae
ENSETEG00000004855	-	76	67.078	ENSPMGG00000016596	apex1	73	67.078	Periophthalmus_magnuspinnatus
ENSETEG00000004855	-	100	93.396	ENSPEMG00000019097	Apex1	100	93.396	Peromyscus_maniculatus_bairdii
ENSETEG00000004855	-	94	67.333	ENSPMAG00000007275	-	95	69.395	Petromyzon_marinus
ENSETEG00000004855	-	100	84.639	ENSPCIG00000023274	APEX1	100	86.604	Phascolarctos_cinereus
ENSETEG00000004855	-	88	72.043	ENSPFOG00000004178	apex1	99	67.089	Poecilia_formosa
ENSETEG00000004855	-	88	71.685	ENSPLAG00000012779	apex1	99	66.772	Poecilia_latipinna
ENSETEG00000004855	-	88	72.043	ENSPMEG00000019623	apex1	99	67.089	Poecilia_mexicana
ENSETEG00000004855	-	88	72.043	ENSPREG00000014298	apex1	99	67.089	Poecilia_reticulata
ENSETEG00000004855	-	100	93.711	ENSPPYG00000005565	APEX1	100	93.711	Pongo_abelii
ENSETEG00000004855	-	100	92.767	ENSPCAG00000010376	APEX1	100	92.767	Procavia_capensis
ENSETEG00000004855	-	100	94.025	ENSPCOG00000021564	APEX1	100	94.025	Propithecus_coquereli
ENSETEG00000004855	-	100	94.688	ENSPVAG00000010736	APEX1	100	94.688	Pteropus_vampyrus
ENSETEG00000004855	-	86	71.636	ENSPNYG00000023940	apex1	99	66.772	Pundamilia_nyererei
ENSETEG00000004855	-	93	66.216	ENSPNAG00000020897	apex1	96	65.085	Pygocentrus_nattereri
ENSETEG00000004855	-	100	92.453	ENSRNOG00000009663	Apex1	100	92.453	Rattus_norvegicus
ENSETEG00000004855	-	100	93.711	ENSRBIG00000038325	APEX1	99	93.711	Rhinopithecus_bieti
ENSETEG00000004855	-	100	94.340	ENSSBOG00000018921	-	100	94.340	Saimiri_boliviensis_boliviensis
ENSETEG00000004855	-	100	79.874	ENSSBOG00000031372	-	100	79.683	Saimiri_boliviensis_boliviensis
ENSETEG00000004855	-	100	83.642	ENSSHAG00000013524	APEX1	100	83.642	Sarcophilus_harrisii
ENSETEG00000004855	-	100	62.264	ENSSFOG00015001948	apex1	100	61.635	Scleropages_formosus
ENSETEG00000004855	-	87	69.065	ENSSMAG00000013348	apex1	99	65.931	Scophthalmus_maximus
ENSETEG00000004855	-	99	65.190	ENSSDUG00000016377	apex1	99	65.190	Seriola_dumerili
ENSETEG00000004855	-	99	65.823	ENSSLDG00000023005	apex1	99	65.823	Seriola_lalandi_dorsalis
ENSETEG00000004855	-	90	73.333	ENSSPUG00000000531	APEX1	95	73.333	Sphenodon_punctatus
ENSETEG00000004855	-	99	65.190	ENSSPAG00000000458	apex1	99	65.190	Stegastes_partitus
ENSETEG00000004855	-	100	93.396	ENSSSCG00000040060	-	100	93.396	Sus_scrofa
ENSETEG00000004855	-	96	54.839	ENSSSCG00000039705	-	96	54.870	Sus_scrofa
ENSETEG00000004855	-	74	61.017	ENSTGUG00000014378	APEX1	100	61.017	Taeniopygia_guttata
ENSETEG00000004855	-	87	67.266	ENSTRUG00000004268	apex1	95	62.975	Takifugu_rubripes
ENSETEG00000004855	-	99	63.608	ENSTNIG00000005778	apex1	99	63.608	Tetraodon_nigroviridis
ENSETEG00000004855	-	100	90.881	ENSTBEG00000006405	APEX1	100	90.881	Tupaia_belangeri
ENSETEG00000004855	-	74	94.068	ENSTTRG00000007860	APEX1	100	94.068	Tursiops_truncatus
ENSETEG00000004855	-	100	94.654	ENSUAMG00000010457	APEX1	100	94.654	Ursus_americanus
ENSETEG00000004855	-	100	94.654	ENSUMAG00000009178	APEX1	100	94.654	Ursus_maritimus
ENSETEG00000004855	-	74	87.288	ENSVPAG00000005083	APEX1	100	87.288	Vicugna_pacos
ENSETEG00000004855	-	100	92.767	ENSVVUG00000009010	APEX1	100	92.767	Vulpes_vulpes
ENSETEG00000004855	-	100	66.978	ENSXETG00000024773	apex1	100	66.978	Xenopus_tropicalis
ENSETEG00000004855	-	88	71.685	ENSXCOG00000015233	apex1	99	67.405	Xiphophorus_couchianus
ENSETEG00000004855	-	93	67.427	ENSXMAG00000006195	apex1	99	67.405	Xiphophorus_maculatus