EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSETEG00000005056 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 494 bases
Position: chrscaffold_151913:362-855
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000004112	zf-U1	PF06220.12	2.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000005055	-	477	-	ENSETEP00000004112	158 (aa)	-	UPI0000E40E31

Gene Model

Click here to download ENSETEG00000005056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000005056's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSETEG00000005056	-	54	68.966	ENSETEG00000008756	-	74	77.333
ENSETEG00000005056	-	97	72.727	ENSETEG00000011265	-	96	72.727
ENSETEG00000005056	-	80	72.441	ENSETEG00000008268	-	96	74.026

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000005056	-	70	71.171	ENSCAFG00020001897	-	85	66.667	Canis_lupus_dingo
ENSETEG00000005056	-	80	62.992	ENSCAFG00020024178	-	81	64.516	Canis_lupus_dingo
ENSETEG00000005056	-	85	66.176	ENSTSYG00000032340	-	81	66.176	Carlito_syrichta
ENSETEG00000005056	-	80	69.291	ENSCANG00000036886	-	95	70.968	Colobus_angolensis_palliatus
ENSETEG00000005056	-	68	62.037	ENSCGRG00001021613	-	76	62.308	Cricetulus_griseus_chok1gshd
ENSETEG00000005056	-	68	62.037	ENSCGRG00000012679	-	76	62.308	Cricetulus_griseus_crigri
ENSETEG00000005056	-	100	61.714	ENSDORG00000023276	-	97	61.850	Dipodomys_ordii
ENSETEG00000005056	-	81	41.406	ENSFDAG00000009826	-	64	37.037	Fukomys_damarensis
ENSETEG00000005056	-	85	57.353	ENSMOCG00000022679	-	84	58.824	Microtus_ochrogaster
ENSETEG00000005056	-	80	64.567	ENSPEMG00000015862	-	94	67.532	Peromyscus_maniculatus_bairdii
ENSETEG00000005056	-	85	65.441	ENSPCOG00000022107	-	81	66.452	Propithecus_coquereli
ENSETEG00000005056	-	95	61.688	ENSVVUG00000009930	-	86	61.688	Vulpes_vulpes
ENSETEG00000005056	-	97	72.903	ENSVVUG00000010536	-	94	73.203	Vulpes_vulpes