EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSETEG00000005349 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 1865 bases
Position: chrscaffold_325255:44489-46353
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000004344	RRM_1	PF00076.22	2.1e-32	1	2
ENSETEP00000004344	RRM_1	PF00076.22	2.1e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000005347	-	873	-	ENSETEP00000004344	290 (aa)	-	UPI0000E406A8

Gene Model

Click here to download ENSETEG00000005349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000005349's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSETEG00000005349	-	59	40.678	ENSETEG00000020396	SRSF5	60	42.771

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000005349	-	63	98.913	ENSG00000136450	SRSF1	100	96.923	Homo_sapiens
ENSETEG00000005349	-	62	90.556	ENSAPOG00000002748	-	73	89.444	Acanthochromis_polyacanthus
ENSETEG00000005349	-	63	89.130	ENSAPOG00000008542	-	76	88.421	Acanthochromis_polyacanthus
ENSETEG00000005349	-	63	95.109	ENSAMEG00000002635	SRSF1	73	95.109	Ailuropoda_melanoleuca
ENSETEG00000005349	-	62	89.444	ENSACIG00000008091	srsf1a	77	88.889	Amphilophus_citrinellus
ENSETEG00000005349	-	62	91.111	ENSAOCG00000010671	-	77	90.000	Amphiprion_ocellaris
ENSETEG00000005349	-	63	88.421	ENSAOCG00000000337	-	77	88.421	Amphiprion_ocellaris
ENSETEG00000005349	-	63	88.421	ENSAPEG00000023352	-	75	88.421	Amphiprion_percula
ENSETEG00000005349	-	62	91.111	ENSAPEG00000009915	-	77	90.000	Amphiprion_percula
ENSETEG00000005349	-	63	87.500	ENSATEG00000021567	-	76	88.043	Anabas_testudineus
ENSETEG00000005349	-	62	91.111	ENSATEG00000022403	-	72	90.000	Anabas_testudineus
ENSETEG00000005349	-	63	96.739	ENSACAG00000005542	-	74	96.739	Anolis_carolinensis
ENSETEG00000005349	-	63	71.739	ENSANAG00000025417	-	68	70.109	Aotus_nancymaae
ENSETEG00000005349	-	63	98.913	ENSANAG00000020583	-	99	95.833	Aotus_nancymaae
ENSETEG00000005349	-	62	90.323	ENSAMXG00000035996	srsf1a	74	89.247	Astyanax_mexicanus
ENSETEG00000005349	-	63	98.913	ENSBTAG00000014766	SRSF1	74	98.913	Bos_taurus
ENSETEG00000005349	-	63	90.710	ENSCJAG00000008111	-	82	90.217	Callithrix_jacchus
ENSETEG00000005349	-	63	98.913	ENSCJAG00000041713	-	99	95.833	Callithrix_jacchus
ENSETEG00000005349	-	63	98.913	ENSCAFG00000017430	SRSF1	73	98.913	Canis_familiaris
ENSETEG00000005349	-	63	98.913	ENSCAFG00020025632	-	73	98.913	Canis_lupus_dingo
ENSETEG00000005349	-	63	98.913	ENSCHIG00000010787	SRSF1	74	98.913	Capra_hircus
ENSETEG00000005349	-	63	98.913	ENSTSYG00000013899	-	99	95.833	Carlito_syrichta
ENSETEG00000005349	-	63	98.913	ENSCPOG00000032681	-	74	98.913	Cavia_porcellus
ENSETEG00000005349	-	63	98.913	ENSCCAG00000029484	-	99	95.833	Cebus_capucinus
ENSETEG00000005349	-	63	98.913	ENSCATG00000042294	-	99	95.833	Cercocebus_atys
ENSETEG00000005349	-	63	98.913	ENSCLAG00000014707	-	74	98.913	Chinchilla_lanigera
ENSETEG00000005349	-	63	97.826	ENSCSAG00000005642	-	73	97.826	Chlorocebus_sabaeus
ENSETEG00000005349	-	63	98.913	ENSCHOG00000001899	SRSF1	74	98.913	Choloepus_hoffmanni
ENSETEG00000005349	-	63	97.283	ENSCPBG00000009851	-	74	97.283	Chrysemys_picta_bellii
ENSETEG00000005349	-	63	98.913	ENSCANG00000029726	-	99	95.833	Colobus_angolensis_palliatus
ENSETEG00000005349	-	63	98.913	ENSCGRG00001000670	Srsf1	73	98.913	Cricetulus_griseus_chok1gshd
ENSETEG00000005349	-	63	98.913	ENSCGRG00000005590	Srsf1	74	98.913	Cricetulus_griseus_crigri
ENSETEG00000005349	-	62	89.071	ENSCSEG00000014272	-	73	90.164	Cynoglossus_semilaevis
ENSETEG00000005349	-	63	84.500	ENSCSEG00000009973	-	76	82.500	Cynoglossus_semilaevis
ENSETEG00000005349	-	62	91.111	ENSCVAG00000018617	-	73	90.000	Cyprinodon_variegatus
ENSETEG00000005349	-	68	83.333	ENSCVAG00000005458	-	98	83.333	Cyprinodon_variegatus
ENSETEG00000005349	-	62	95.580	ENSDARG00000017843	srsf1b	74	95.580	Danio_rerio
ENSETEG00000005349	-	62	89.005	ENSDARG00000057691	srsf1a	99	86.911	Danio_rerio
ENSETEG00000005349	-	63	98.913	ENSDNOG00000011737	-	73	98.913	Dasypus_novemcinctus
ENSETEG00000005349	-	63	98.913	ENSDORG00000015082	Srsf1	74	98.913	Dipodomys_ordii
ENSETEG00000005349	-	63	98.913	ENSEASG00005002922	-	73	98.913	Equus_asinus_asinus
ENSETEG00000005349	-	63	98.913	ENSECAG00000016654	SRSF1	74	98.913	Equus_caballus
ENSETEG00000005349	-	100	94.521	ENSEEUG00000009255	-	100	93.836	Erinaceus_europaeus
ENSETEG00000005349	-	62	90.608	ENSELUG00000021646	srsf1a	72	88.950	Esox_lucius
ENSETEG00000005349	-	63	98.913	ENSFCAG00000002250	-	94	96.809	Felis_catus
ENSETEG00000005349	-	63	75.000	ENSFALG00000005062	-	73	75.000	Ficedula_albicollis
ENSETEG00000005349	-	63	98.913	ENSFDAG00000010646	-	74	98.913	Fukomys_damarensis
ENSETEG00000005349	-	62	91.111	ENSFHEG00000003174	srsf1a	77	90.000	Fundulus_heteroclitus
ENSETEG00000005349	-	62	87.222	ENSGMOG00000014787	-	74	86.111	Gadus_morhua
ENSETEG00000005349	-	63	97.283	ENSGALG00000005525	SRSF1	74	97.283	Gallus_gallus
ENSETEG00000005349	-	63	85.326	ENSGACG00000020621	srsf1b	74	84.239	Gasterosteus_aculeatus
ENSETEG00000005349	-	63	97.283	ENSGAGG00000022965	-	73	97.283	Gopherus_agassizii
ENSETEG00000005349	-	63	98.913	ENSGGOG00000004386	SRSF1	99	95.833	Gorilla_gorilla
ENSETEG00000005349	-	62	90.556	ENSHBUG00000016788	srsf1a	78	86.243	Haplochromis_burtoni
ENSETEG00000005349	-	52	98.675	ENSHGLG00000000669	-	70	98.675	Heterocephalus_glaber_female
ENSETEG00000005349	-	52	98.675	ENSHGLG00000000600	-	70	98.675	Heterocephalus_glaber_female
ENSETEG00000005349	-	63	98.913	ENSHGLG00100016906	-	74	98.913	Heterocephalus_glaber_male
ENSETEG00000005349	-	62	87.500	ENSHCOG00000018918	srsf1a	72	84.783	Hippocampus_comes
ENSETEG00000005349	-	62	89.247	ENSIPUG00000017039	srsf1a	74	88.172	Ictalurus_punctatus
ENSETEG00000005349	-	63	90.761	ENSIPUG00000008750	srsf1b	75	91.304	Ictalurus_punctatus
ENSETEG00000005349	-	63	98.913	ENSSTOG00000000243	-	92	98.913	Ictidomys_tridecemlineatus
ENSETEG00000005349	-	63	98.913	ENSJJAG00000000102	-	74	98.913	Jaculus_jaculus
ENSETEG00000005349	-	62	89.444	ENSKMAG00000019232	srsf1a	73	89.444	Kryptolebias_marmoratus
ENSETEG00000005349	-	62	90.000	ENSLBEG00000020864	-	77	88.889	Labrus_bergylta
ENSETEG00000005349	-	63	81.818	ENSLBEG00000015294	-	75	83.957	Labrus_bergylta
ENSETEG00000005349	-	62	90.608	ENSLACG00000014160	srsf1a	68	88.950	Latimeria_chalumnae
ENSETEG00000005349	-	63	96.196	ENSLOCG00000005994	srsf1a	74	96.196	Lepisosteus_oculatus
ENSETEG00000005349	-	63	98.913	ENSLAFG00000025743	SRSF1	74	98.913	Loxodonta_africana
ENSETEG00000005349	-	63	98.913	ENSMFAG00000040003	-	99	95.833	Macaca_fascicularis
ENSETEG00000005349	-	63	95.652	ENSMMUG00000003260	-	89	95.652	Macaca_mulatta
ENSETEG00000005349	-	63	98.913	ENSMMUG00000004725	SRSF1	99	95.833	Macaca_mulatta
ENSETEG00000005349	-	63	98.913	ENSMNEG00000027680	-	99	95.833	Macaca_nemestrina
ENSETEG00000005349	-	63	95.109	ENSMNEG00000015983	-	73	95.109	Macaca_nemestrina
ENSETEG00000005349	-	63	98.913	ENSMLEG00000040509	SRSF1	74	98.913	Mandrillus_leucophaeus
ENSETEG00000005349	-	63	91.304	ENSMLEG00000015243	-	72	88.043	Mandrillus_leucophaeus
ENSETEG00000005349	-	63	89.130	ENSMAMG00000019687	-	74	88.587	Mastacembelus_armatus
ENSETEG00000005349	-	62	91.111	ENSMAMG00000018454	-	73	90.000	Mastacembelus_armatus
ENSETEG00000005349	-	63	91.848	ENSMAMG00000019691	-	76	90.761	Mastacembelus_armatus
ENSETEG00000005349	-	63	98.913	ENSMAUG00000021845	Srsf1	74	98.913	Mesocricetus_auratus
ENSETEG00000005349	-	63	98.913	ENSMICG00000013639	-	99	95.833	Microcebus_murinus
ENSETEG00000005349	-	63	98.913	ENSMOCG00000001996	Srsf1	74	98.913	Microtus_ochrogaster
ENSETEG00000005349	-	62	89.444	ENSMMOG00000014354	srsf1a	77	88.333	Mola_mola
ENSETEG00000005349	-	99	88.699	ENSMODG00000014781	-	100	88.699	Monodelphis_domestica
ENSETEG00000005349	-	62	90.556	ENSMALG00000017129	-	70	89.444	Monopterus_albus
ENSETEG00000005349	-	63	75.543	ENSMALG00000007763	-	73	77.717	Monopterus_albus
ENSETEG00000005349	-	63	98.913	MGP_CAROLIEiJ_G0016943	Srsf1	92	98.913	Mus_caroli
ENSETEG00000005349	-	63	98.913	ENSMUSG00000018379	Srsf1	92	98.913	Mus_musculus
ENSETEG00000005349	-	63	98.913	MGP_PahariEiJ_G0018074	Srsf1	91	97.917	Mus_pahari
ENSETEG00000005349	-	63	98.913	MGP_SPRETEiJ_G0017790	Srsf1	92	98.913	Mus_spretus
ENSETEG00000005349	-	63	98.913	ENSMPUG00000015369	SRSF1	74	98.913	Mustela_putorius_furo
ENSETEG00000005349	-	63	98.913	ENSMLUG00000011040	SRSF1	74	98.913	Myotis_lucifugus
ENSETEG00000005349	-	63	86.413	ENSMLUG00000023995	-	74	89.674	Myotis_lucifugus
ENSETEG00000005349	-	63	98.913	ENSNGAG00000011395	Srsf1	74	98.913	Nannospalax_galili
ENSETEG00000005349	-	63	80.435	ENSNBRG00000008041	srsf1b	74	80.978	Neolamprologus_brichardi
ENSETEG00000005349	-	63	98.913	ENSNLEG00000008088	-	99	95.833	Nomascus_leucogenys
ENSETEG00000005349	-	63	98.370	ENSODEG00000011481	-	74	98.370	Octodon_degus
ENSETEG00000005349	-	62	89.444	ENSONIG00000013160	-	72	88.889	Oreochromis_niloticus
ENSETEG00000005349	-	63	91.304	ENSONIG00000004860	-	75	89.674	Oreochromis_niloticus
ENSETEG00000005349	-	63	72.283	ENSOCUG00000010894	-	72	70.652	Oryctolagus_cuniculus
ENSETEG00000005349	-	62	91.111	ENSORLG00000004580	srsf1a	73	90.000	Oryzias_latipes
ENSETEG00000005349	-	62	91.111	ENSORLG00020009456	srsf1a	77	90.000	Oryzias_latipes_hni
ENSETEG00000005349	-	62	91.111	ENSORLG00015014384	srsf1a	77	90.000	Oryzias_latipes_hsok
ENSETEG00000005349	-	56	89.571	ENSOMEG00000004106	srsf1a	66	86.503	Oryzias_melastigma
ENSETEG00000005349	-	88	85.603	ENSOGAG00000025950	-	97	79.245	Otolemur_garnettii
ENSETEG00000005349	-	63	92.391	ENSOARG00000008323	SRSF1	73	92.391	Ovis_aries
ENSETEG00000005349	-	63	98.913	ENSPPAG00000043403	-	99	95.833	Pan_paniscus
ENSETEG00000005349	-	63	98.913	ENSPPRG00000004238	-	94	96.809	Panthera_pardus
ENSETEG00000005349	-	63	98.913	ENSPTRG00000049077	SRSF1	99	95.833	Pan_troglodytes
ENSETEG00000005349	-	63	98.913	ENSPANG00000022305	-	99	95.833	Papio_anubis
ENSETEG00000005349	-	63	69.565	ENSPANG00000030275	-	69	69.022	Papio_anubis
ENSETEG00000005349	-	63	90.761	ENSPKIG00000012857	srsf1b	75	91.304	Paramormyrops_kingsleyae
ENSETEG00000005349	-	62	92.265	ENSPKIG00000007204	srsf1a	77	91.667	Paramormyrops_kingsleyae
ENSETEG00000005349	-	63	90.323	ENSPSIG00000009000	-	100	70.500	Pelodiscus_sinensis
ENSETEG00000005349	-	62	85.556	ENSPMGG00000005467	-	73	84.444	Periophthalmus_magnuspinnatus
ENSETEG00000005349	-	63	87.766	ENSPMGG00000013112	-	85	86.294	Periophthalmus_magnuspinnatus
ENSETEG00000005349	-	63	98.913	ENSPEMG00000021416	Srsf1	74	98.913	Peromyscus_maniculatus_bairdii
ENSETEG00000005349	-	63	97.838	ENSPCIG00000006076	-	74	97.838	Phascolarctos_cinereus
ENSETEG00000005349	-	63	88.525	ENSPFOG00000018325	-	65	88.462	Poecilia_formosa
ENSETEG00000005349	-	62	89.011	ENSPLAG00000008416	srsf1b	74	88.462	Poecilia_latipinna
ENSETEG00000005349	-	62	89.011	ENSPMEG00000002388	-	74	88.462	Poecilia_mexicana
ENSETEG00000005349	-	63	90.164	ENSPREG00000009667	srsf1a	73	90.000	Poecilia_reticulata
ENSETEG00000005349	-	63	98.913	ENSPPYG00000008240	SRSF1	74	98.913	Pongo_abelii
ENSETEG00000005349	-	63	98.913	ENSPCAG00000005199	SRSF1	74	98.913	Procavia_capensis
ENSETEG00000005349	-	63	98.913	ENSPCOG00000023654	-	99	95.833	Propithecus_coquereli
ENSETEG00000005349	-	63	74.866	ENSPCOG00000025736	-	89	75.000	Propithecus_coquereli
ENSETEG00000005349	-	63	91.848	ENSPNAG00000014601	srsf1b	74	90.761	Pygocentrus_nattereri
ENSETEG00000005349	-	62	90.055	ENSPNAG00000022241	srsf1a	73	89.503	Pygocentrus_nattereri
ENSETEG00000005349	-	63	98.913	ENSRNOG00000050323	Srsf1	74	98.913	Rattus_norvegicus
ENSETEG00000005349	-	63	98.913	ENSRBIG00000034445	-	99	95.833	Rhinopithecus_bieti
ENSETEG00000005349	-	63	98.913	ENSRROG00000041506	-	99	95.833	Rhinopithecus_roxellana
ENSETEG00000005349	-	63	98.913	ENSSBOG00000025377	-	99	95.833	Saimiri_boliviensis_boliviensis
ENSETEG00000005349	-	63	97.838	ENSSHAG00000002552	-	74	97.838	Sarcophilus_harrisii
ENSETEG00000005349	-	63	94.536	ENSSFOG00015004800	srsf1a	73	91.803	Scleropages_formosus
ENSETEG00000005349	-	63	86.387	ENSSMAG00000009719	-	75	84.817	Scophthalmus_maximus
ENSETEG00000005349	-	62	89.444	ENSSMAG00000007018	-	73	88.333	Scophthalmus_maximus
ENSETEG00000005349	-	63	81.283	ENSSDUG00000003929	-	78	83.422	Seriola_dumerili
ENSETEG00000005349	-	62	90.000	ENSSDUG00000011303	-	77	88.889	Seriola_dumerili
ENSETEG00000005349	-	63	83.784	ENSSLDG00000016895	-	77	82.703	Seriola_lalandi_dorsalis
ENSETEG00000005349	-	63	76.757	ENSSLDG00000016868	-	72	82.162	Seriola_lalandi_dorsalis
ENSETEG00000005349	-	62	90.000	ENSSLDG00000010543	-	73	88.889	Seriola_lalandi_dorsalis
ENSETEG00000005349	-	100	94.521	ENSSARG00000010949	-	100	93.836	Sorex_araneus
ENSETEG00000005349	-	63	97.283	ENSSPUG00000000804	-	94	96.257	Sphenodon_punctatus
ENSETEG00000005349	-	63	87.755	ENSSPAG00000014152	-	76	85.714	Stegastes_partitus
ENSETEG00000005349	-	62	90.000	ENSSPAG00000022562	-	73	90.000	Stegastes_partitus
ENSETEG00000005349	-	63	98.913	ENSSSCG00000017626	-	74	98.913	Sus_scrofa
ENSETEG00000005349	-	62	90.556	ENSTRUG00000003691	srsf1a	73	89.444	Takifugu_rubripes
ENSETEG00000005349	-	62	90.556	ENSTNIG00000016223	srsf1a	72	89.444	Tetraodon_nigroviridis
ENSETEG00000005349	-	100	94.178	ENSTBEG00000015378	-	100	93.493	Tupaia_belangeri
ENSETEG00000005349	-	63	98.913	ENSUAMG00000009858	SRSF1	74	98.913	Ursus_americanus
ENSETEG00000005349	-	63	98.913	ENSUMAG00000000455	-	73	98.913	Ursus_maritimus
ENSETEG00000005349	-	63	98.370	ENSVPAG00000010094	SRSF1	74	98.370	Vicugna_pacos
ENSETEG00000005349	-	63	98.913	ENSVVUG00000011882	-	73	98.913	Vulpes_vulpes
ENSETEG00000005349	-	63	89.674	ENSXETG00000008954	srsf1	76	84.729	Xenopus_tropicalis
ENSETEG00000005349	-	62	91.111	ENSXMAG00000011766	srsf1a	73	90.000	Xiphophorus_maculatus