EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSETEG00000005527 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 44638 bases
Position: chrGeneScaffold_820:43554-88191
Accession: 29318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000004495	Ago_hook	PF10427.9	1.2e-17	1	1
ENSETEP00000004495	RRM_1	PF00076.22	7.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000005529	TNRC6C-201	5184	-	ENSETEP00000004495	1727 (aa)	-	UPI0000E42004

Gene Model

Click here to download ENSETEG00000005527's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000005527's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSETEG00000005527	TNRC6C	82	44.389	ENSETEG00000014658	TNRC6A	62	44.638

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000005527	TNRC6C	86	83.729	ENSG00000078687	TNRC6C	100	81.897	Homo_sapiens
ENSETEG00000005527	TNRC6C	86	55.976	ENSAPOG00000019749	tnrc6c1	87	56.754	Acanthochromis_polyacanthus
ENSETEG00000005527	TNRC6C	89	76.949	ENSAMEG00000013756	TNRC6C	89	76.515	Ailuropoda_melanoleuca
ENSETEG00000005527	TNRC6C	64	53.083	ENSACIG00000008075	tnrc6c1	85	53.388	Amphilophus_citrinellus
ENSETEG00000005527	TNRC6C	77	63.754	ENSAOCG00000023968	tnrc6c1	87	66.497	Amphiprion_ocellaris
ENSETEG00000005527	TNRC6C	82	54.890	ENSAPEG00000009020	tnrc6c1	88	55.929	Amphiprion_percula
ENSETEG00000005527	TNRC6C	90	74.793	ENSAPLG00000005456	TNRC6C	84	74.793	Anas_platyrhynchos
ENSETEG00000005527	TNRC6C	89	77.315	ENSACAG00000016198	TNRC6C	82	76.768	Anolis_carolinensis
ENSETEG00000005527	TNRC6C	86	83.803	ENSANAG00000021554	TNRC6C	90	83.217	Aotus_nancymaae
ENSETEG00000005527	TNRC6C	82	52.562	ENSACLG00000000424	tnrc6c1	87	53.416	Astatotilapia_calliptera
ENSETEG00000005527	TNRC6C	90	78.367	ENSBTAG00000018658	TNRC6C	90	81.636	Bos_taurus
ENSETEG00000005527	TNRC6C	86	83.803	ENSCJAG00000019431	TNRC6C	90	83.130	Callithrix_jacchus
ENSETEG00000005527	TNRC6C	90	79.275	ENSCAFG00000005224	TNRC6C	89	74.229	Canis_familiaris
ENSETEG00000005527	TNRC6C	90	81.488	ENSCAFG00020006661	TNRC6C	90	80.331	Canis_lupus_dingo
ENSETEG00000005527	TNRC6C	90	81.675	ENSCHIG00000026004	TNRC6C	90	79.498	Capra_hircus
ENSETEG00000005527	TNRC6C	87	80.808	ENSTSYG00000005403	TNRC6C	90	80.808	Carlito_syrichta
ENSETEG00000005527	TNRC6C	90	75.431	ENSCAPG00000007307	TNRC6C	83	75.345	Cavia_aperea
ENSETEG00000005527	TNRC6C	90	82.245	ENSCPOG00000000467	TNRC6C	90	82.158	Cavia_porcellus
ENSETEG00000005527	TNRC6C	86	83.979	ENSCCAG00000030524	TNRC6C	90	83.391	Cebus_capucinus
ENSETEG00000005527	TNRC6C	86	83.539	ENSCATG00000033135	TNRC6C	90	82.957	Cercocebus_atys
ENSETEG00000005527	TNRC6C	90	82.768	ENSCLAG00000011139	TNRC6C	82	82.681	Chinchilla_lanigera
ENSETEG00000005527	TNRC6C	89	80.681	ENSCSAG00000005167	TNRC6C	83	80.235	Chlorocebus_sabaeus
ENSETEG00000005527	TNRC6C	66	89.916	ENSCHOG00000000088	TNRC6C	66	89.916	Choloepus_hoffmanni
ENSETEG00000005527	TNRC6C	89	80.247	ENSCPBG00000027960	TNRC6C	89	79.496	Chrysemys_picta_bellii
ENSETEG00000005527	TNRC6C	86	83.715	ENSCANG00000041771	TNRC6C	90	83.130	Colobus_angolensis_palliatus
ENSETEG00000005527	TNRC6C	90	80.656	ENSCGRG00001022686	Tnrc6c	90	79.310	Cricetulus_griseus_chok1gshd
ENSETEG00000005527	TNRC6C	90	81.217	ENSCGRG00000018041	Tnrc6c	90	79.310	Cricetulus_griseus_crigri
ENSETEG00000005527	TNRC6C	82	53.542	ENSCSEG00000012744	tnrc6c1	83	53.554	Cynoglossus_semilaevis
ENSETEG00000005527	TNRC6C	80	59.144	ENSDARG00000076847	tnrc6c1	84	58.446	Danio_rerio
ENSETEG00000005527	TNRC6C	90	80.387	ENSDNOG00000003247	TNRC6C	84	80.387	Dasypus_novemcinctus
ENSETEG00000005527	TNRC6C	90	78.287	ENSDORG00000004558	Tnrc6c	89	78.201	Dipodomys_ordii
ENSETEG00000005527	TNRC6C	87	82.404	ENSEASG00005004799	TNRC6C	90	82.404	Equus_asinus_asinus
ENSETEG00000005527	TNRC6C	90	82.404	ENSECAG00000012486	TNRC6C	83	82.404	Equus_caballus
ENSETEG00000005527	TNRC6C	86	78.670	ENSEEUG00000010008	TNRC6C	86	78.670	Erinaceus_europaeus
ENSETEG00000005527	TNRC6C	86	81.426	ENSFCAG00000028358	TNRC6C	90	81.043	Felis_catus
ENSETEG00000005527	TNRC6C	87	74.521	ENSFALG00000000848	TNRC6C	90	75.068	Ficedula_albicollis
ENSETEG00000005527	TNRC6C	90	82.942	ENSFDAG00000010368	TNRC6C	90	82.855	Fukomys_damarensis
ENSETEG00000005527	TNRC6C	76	61.275	ENSFHEG00000002936	tnrc6c1	88	52.927	Fundulus_heteroclitus
ENSETEG00000005527	TNRC6C	90	77.422	ENSGALG00000001725	TNRC6C	89	79.878	Gallus_gallus
ENSETEG00000005527	TNRC6C	86	54.772	ENSGAFG00000019019	tnrc6c1	91	54.734	Gambusia_affinis
ENSETEG00000005527	TNRC6C	81	54.362	ENSGACG00000012320	tnrc6c1	83	53.931	Gasterosteus_aculeatus
ENSETEG00000005527	TNRC6C	89	79.859	ENSGAGG00000022043	TNRC6C	88	79.319	Gopherus_agassizii
ENSETEG00000005527	TNRC6C	86	83.201	ENSGGOG00000011304	TNRC6C	90	82.624	Gorilla_gorilla
ENSETEG00000005527	TNRC6C	64	53.234	ENSHBUG00000010846	tnrc6c1	87	53.654	Haplochromis_burtoni
ENSETEG00000005527	TNRC6C	90	83.029	ENSHGLG00000004809	TNRC6C	82	82.942	Heterocephalus_glaber_female
ENSETEG00000005527	TNRC6C	90	81.504	ENSHGLG00100012597	TNRC6C	82	82.022	Heterocephalus_glaber_male
ENSETEG00000005527	TNRC6C	83	58.804	ENSIPUG00000000818	tnrc6c1	80	59.444	Ictalurus_punctatus
ENSETEG00000005527	TNRC6C	90	82.348	ENSSTOG00000009101	TNRC6C	90	82.000	Ictidomys_tridecemlineatus
ENSETEG00000005527	TNRC6C	90	80.484	ENSJJAG00000017055	Tnrc6c	82	80.397	Jaculus_jaculus
ENSETEG00000005527	TNRC6C	79	52.192	ENSKMAG00000021023	tnrc6c1	81	54.828	Kryptolebias_marmoratus
ENSETEG00000005527	TNRC6C	89	69.928	ENSLACG00000015283	TNRC6C	89	70.167	Latimeria_chalumnae
ENSETEG00000005527	TNRC6C	85	62.247	ENSLOCG00000013377	tnrc6c1	81	62.301	Lepisosteus_oculatus
ENSETEG00000005527	TNRC6C	90	83.636	ENSLAFG00000011122	TNRC6C	83	83.550	Loxodonta_africana
ENSETEG00000005527	TNRC6C	86	83.627	ENSMFAG00000043943	TNRC6C	90	83.043	Macaca_fascicularis
ENSETEG00000005527	TNRC6C	86	83.627	ENSMMUG00000011924	TNRC6C	90	83.043	Macaca_mulatta
ENSETEG00000005527	TNRC6C	86	83.539	ENSMNEG00000030405	TNRC6C	90	82.957	Macaca_nemestrina
ENSETEG00000005527	TNRC6C	86	83.539	ENSMLEG00000033436	TNRC6C	90	82.957	Mandrillus_leucophaeus
ENSETEG00000005527	TNRC6C	81	52.071	ENSMAMG00000023613	tnrc6c1	88	55.100	Mastacembelus_armatus
ENSETEG00000005527	TNRC6C	82	53.068	ENSMZEG00005010920	tnrc6c1	87	53.416	Maylandia_zebra
ENSETEG00000005527	TNRC6C	90	74.699	ENSMGAG00000003906	TNRC6C	84	74.699	Meleagris_gallopavo
ENSETEG00000005527	TNRC6C	87	80.484	ENSMAUG00000021618	Tnrc6c	90	80.397	Mesocricetus_auratus
ENSETEG00000005527	TNRC6C	87	82.870	ENSMICG00000003952	TNRC6C	90	82.870	Microcebus_murinus
ENSETEG00000005527	TNRC6C	90	81.739	ENSMOCG00000015879	Tnrc6c	90	81.652	Microtus_ochrogaster
ENSETEG00000005527	TNRC6C	76	56.334	ENSMMOG00000005203	tnrc6c1	91	55.772	Mola_mola
ENSETEG00000005527	TNRC6C	90	78.979	ENSMODG00000001785	TNRC6C	82	78.720	Monodelphis_domestica
ENSETEG00000005527	TNRC6C	90	82.000	MGP_CAROLIEiJ_G0017465	Tnrc6c	90	81.913	Mus_caroli
ENSETEG00000005527	TNRC6C	90	82.000	ENSMUSG00000025571	Tnrc6c	90	81.913	Mus_musculus
ENSETEG00000005527	TNRC6C	90	82.087	MGP_PahariEiJ_G0018593	Tnrc6c	90	82.000	Mus_pahari
ENSETEG00000005527	TNRC6C	90	82.087	MGP_SPRETEiJ_G0018309	Tnrc6c	90	82.000	Mus_spretus
ENSETEG00000005527	TNRC6C	90	78.349	ENSMPUG00000013348	TNRC6C	82	78.349	Mustela_putorius_furo
ENSETEG00000005527	TNRC6C	89	75.694	ENSMLUG00000014431	TNRC6C	82	75.500	Myotis_lucifugus
ENSETEG00000005527	TNRC6C	90	81.504	ENSNGAG00000012203	Tnrc6c	82	81.417	Nannospalax_galili
ENSETEG00000005527	TNRC6C	82	53.350	ENSNBRG00000005344	tnrc6c1	87	54.212	Neolamprologus_brichardi
ENSETEG00000005527	TNRC6C	89	76.923	ENSNLEG00000000047	TNRC6C	82	75.147	Nomascus_leucogenys
ENSETEG00000005527	TNRC6C	87	72.010	ENSMEUG00000005104	TNRC6C	90	72.010	Notamacropus_eugenii
ENSETEG00000005527	TNRC6C	87	82.768	ENSODEG00000012499	TNRC6C	90	82.681	Octodon_degus
ENSETEG00000005527	TNRC6C	77	55.348	ENSONIG00000002210	tnrc6c1	84	56.213	Oreochromis_niloticus
ENSETEG00000005527	TNRC6C	68	74.656	ENSOANG00000009758	-	65	74.636	Ornithorhynchus_anatinus
ENSETEG00000005527	TNRC6C	74	70.920	ENSOCUG00000006122	TNRC6C	76	71.068	Oryctolagus_cuniculus
ENSETEG00000005527	TNRC6C	75	56.227	ENSORLG00000009837	tnrc6c1	100	62.825	Oryzias_latipes
ENSETEG00000005527	TNRC6C	80	51.804	ENSORLG00020016510	tnrc6c1	84	52.010	Oryzias_latipes_hni
ENSETEG00000005527	TNRC6C	62	49.412	ENSORLG00015000171	tnrc6c1	81	49.587	Oryzias_latipes_hsok
ENSETEG00000005527	TNRC6C	59	56.960	ENSOMEG00000000357	tnrc6c1	86	54.288	Oryzias_melastigma
ENSETEG00000005527	TNRC6C	87	78.283	ENSOGAG00000007197	TNRC6C	90	78.283	Otolemur_garnettii
ENSETEG00000005527	TNRC6C	85	74.617	ENSOARG00000006041	TNRC6C	80	74.726	Ovis_aries
ENSETEG00000005527	TNRC6C	86	83.715	ENSPPAG00000027160	TNRC6C	90	83.130	Pan_paniscus
ENSETEG00000005527	TNRC6C	86	81.602	ENSPPRG00000018881	TNRC6C	90	81.217	Panthera_pardus
ENSETEG00000005527	TNRC6C	80	71.429	ENSPTIG00000008791	TNRC6C	77	69.935	Panthera_tigris_altaica
ENSETEG00000005527	TNRC6C	86	83.803	ENSPTRG00000009699	TNRC6C	90	83.217	Pan_troglodytes
ENSETEG00000005527	TNRC6C	86	83.451	ENSPANG00000019994	TNRC6C	90	82.870	Papio_anubis
ENSETEG00000005527	TNRC6C	73	57.685	ENSPKIG00000005428	tnrc6c1	88	54.650	Paramormyrops_kingsleyae
ENSETEG00000005527	TNRC6C	89	78.540	ENSPSIG00000018069	TNRC6C	90	78.068	Pelodiscus_sinensis
ENSETEG00000005527	TNRC6C	76	51.957	ENSPMGG00000022911	tnrc6c1	97	61.885	Periophthalmus_magnuspinnatus
ENSETEG00000005527	TNRC6C	90	81.088	ENSPEMG00000009785	Tnrc6c	89	77.547	Peromyscus_maniculatus_bairdii
ENSETEG00000005527	TNRC6C	80	57.493	ENSPFOG00000012560	tnrc6c1	97	50.552	Poecilia_formosa
ENSETEG00000005527	TNRC6C	78	57.584	ENSPLAG00000021055	tnrc6c1	90	55.004	Poecilia_latipinna
ENSETEG00000005527	TNRC6C	89	80.851	ENSPPYG00000008679	TNRC6C	81	80.404	Pongo_abelii
ENSETEG00000005527	TNRC6C	84	86.493	ENSPCAG00000012510	TNRC6C	84	86.493	Procavia_capensis
ENSETEG00000005527	TNRC6C	87	83.217	ENSPCOG00000021451	TNRC6C	90	83.130	Propithecus_coquereli
ENSETEG00000005527	TNRC6C	85	88.983	ENSPVAG00000002008	TNRC6C	85	88.983	Pteropus_vampyrus
ENSETEG00000005527	TNRC6C	82	52.231	ENSPNYG00000014477	tnrc6c1	86	53.086	Pundamilia_nyererei
ENSETEG00000005527	TNRC6C	87	81.913	ENSRNOG00000022395	Tnrc6c	89	81.826	Rattus_norvegicus
ENSETEG00000005527	TNRC6C	86	83.715	ENSRBIG00000027777	TNRC6C	90	83.130	Rhinopithecus_bieti
ENSETEG00000005527	TNRC6C	86	83.715	ENSRROG00000042912	TNRC6C	90	83.130	Rhinopithecus_roxellana
ENSETEG00000005527	TNRC6C	89	80.426	ENSSBOG00000023981	TNRC6C	90	79.983	Saimiri_boliviensis_boliviensis
ENSETEG00000005527	TNRC6C	51	78.162	ENSSHAG00000018330	-	100	77.838	Sarcophilus_harrisii
ENSETEG00000005527	TNRC6C	83	58.478	ENSSFOG00015006475	tnrc6c1	83	57.702	Scleropages_formosus
ENSETEG00000005527	TNRC6C	51	53.391	ENSSFOG00015004735	-	99	57.963	Scleropages_formosus
ENSETEG00000005527	TNRC6C	86	53.917	ENSSMAG00000012761	tnrc6c1	91	55.114	Scophthalmus_maximus
ENSETEG00000005527	TNRC6C	86	55.378	ENSSDUG00000002366	tnrc6c1	88	55.865	Seriola_dumerili
ENSETEG00000005527	TNRC6C	78	54.276	ENSSLDG00000025613	tnrc6c1	88	54.772	Seriola_lalandi_dorsalis
ENSETEG00000005527	TNRC6C	81	88.235	ENSSARG00000006816	TNRC6C	81	88.235	Sorex_araneus
ENSETEG00000005527	TNRC6C	70	75.439	ENSSPUG00000007341	TNRC6C	80	75.272	Sphenodon_punctatus
ENSETEG00000005527	TNRC6C	78	49.713	ENSSPAG00000014977	tnrc6c1	87	54.645	Stegastes_partitus
ENSETEG00000005527	TNRC6C	87	81.446	ENSSSCG00000034373	TNRC6C	90	81.446	Sus_scrofa
ENSETEG00000005527	TNRC6C	90	79.809	ENSTGUG00000007733	TNRC6C	90	79.634	Taeniopygia_guttata
ENSETEG00000005527	TNRC6C	82	54.281	ENSTRUG00000011685	tnrc6c1	91	53.433	Takifugu_rubripes
ENSETEG00000005527	TNRC6C	82	55.782	ENSTNIG00000005273	tnrc6c1	100	56.458	Tetraodon_nigroviridis
ENSETEG00000005527	TNRC6C	53	82.031	ENSTBEG00000005046	TNRC6C	80	82.031	Tupaia_belangeri
ENSETEG00000005527	TNRC6C	90	82.855	ENSTTRG00000010828	TNRC6C	90	82.594	Tursiops_truncatus
ENSETEG00000005527	TNRC6C	89	78.621	ENSUMAG00000013614	TNRC6C	83	78.411	Ursus_maritimus
ENSETEG00000005527	TNRC6C	50	72.936	ENSVPAG00000006765	-	99	72.936	Vicugna_pacos
ENSETEG00000005527	TNRC6C	87	82.404	ENSVVUG00000015268	TNRC6C	90	82.404	Vulpes_vulpes
ENSETEG00000005527	TNRC6C	87	71.859	ENSXETG00000019470	tnrc6c	90	71.515	Xenopus_tropicalis
ENSETEG00000005527	TNRC6C	80	59.030	ENSXMAG00000025971	tnrc6c1	90	54.983	Xiphophorus_maculatus