EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000005703 (Gene tree)
Gene ID: -
Gene Symbol: LSM10
Alias: MGC15749
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 366 bases
Position: chrGeneScaffold_8183:71466-71831
Accession: 101656279
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000004636	LSM	PF01423.22	9.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000005702	LSM10-201	366	XM_004705295	ENSETEP00000004636	121 (aa)	XP_004705352	UPI0000E40FE9

Gene Model

Click here to download ENSETEG00000005703's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000005703's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000005703	LSM10	100	87.805	ENSG00000181817	LSM10	100	87.805	Homo_sapiens
ENSETEG00000005703	LSM10	100	91.057	ENSAMEG00000019854	LSM10	100	91.057	Ailuropoda_melanoleuca
ENSETEG00000005703	LSM10	98	66.116	ENSACIG00000015420	oscp1a	79	66.116	Amphilophus_citrinellus
ENSETEG00000005703	LSM10	93	67.826	ENSAOCG00000015618	LSM10	95	67.826	Amphiprion_ocellaris
ENSETEG00000005703	LSM10	93	67.826	ENSAOCG00000014654	-	95	67.826	Amphiprion_ocellaris
ENSETEG00000005703	LSM10	90	66.667	ENSAOCG00000015607	LSM10	86	66.667	Amphiprion_ocellaris
ENSETEG00000005703	LSM10	90	66.667	ENSAPEG00000021851	LSM10	86	66.667	Amphiprion_percula
ENSETEG00000005703	LSM10	93	67.826	ENSAPEG00000021845	-	95	67.826	Amphiprion_percula
ENSETEG00000005703	LSM10	88	63.551	ENSATEG00000006310	oscp1a	79	63.551	Anabas_testudineus
ENSETEG00000005703	LSM10	100	67.480	ENSACAG00000001231	LSM10	100	67.480	Anolis_carolinensis
ENSETEG00000005703	LSM10	98	87.500	ENSANAG00000031489	-	98	87.500	Aotus_nancymaae
ENSETEG00000005703	LSM10	100	87.805	ENSANAG00000018759	-	100	87.805	Aotus_nancymaae
ENSETEG00000005703	LSM10	94	66.379	ENSACLG00000004728	oscp1a	94	66.379	Astatotilapia_calliptera
ENSETEG00000005703	LSM10	96	67.521	ENSAMXG00000025301	oscp1a	98	67.521	Astyanax_mexicanus
ENSETEG00000005703	LSM10	98	90.833	ENSBTAG00000024096	LSM10	98	90.833	Bos_taurus
ENSETEG00000005703	LSM10	100	86.992	ENSCJAG00000044880	LSM10	100	86.992	Callithrix_jacchus
ENSETEG00000005703	LSM10	100	92.683	ENSCAFG00000003382	LSM10	100	92.683	Canis_familiaris
ENSETEG00000005703	LSM10	100	92.683	ENSCAFG00020008920	LSM10	100	92.683	Canis_lupus_dingo
ENSETEG00000005703	LSM10	98	90.833	ENSCHIG00000009398	LSM10	98	90.833	Capra_hircus
ENSETEG00000005703	LSM10	100	91.057	ENSCAPG00000012567	LSM10	100	91.057	Cavia_aperea
ENSETEG00000005703	LSM10	100	91.057	ENSCPOG00000039302	LSM10	100	91.057	Cavia_porcellus
ENSETEG00000005703	LSM10	100	87.805	ENSCCAG00000018913	-	100	87.805	Cebus_capucinus
ENSETEG00000005703	LSM10	98	87.500	ENSCCAG00000008378	-	98	87.500	Cebus_capucinus
ENSETEG00000005703	LSM10	100	88.618	ENSCATG00000006589	LSM10	100	88.618	Cercocebus_atys
ENSETEG00000005703	LSM10	100	91.870	ENSCLAG00000008633	LSM10	100	91.870	Chinchilla_lanigera
ENSETEG00000005703	LSM10	100	88.618	ENSCSAG00000000134	LSM10	100	88.618	Chlorocebus_sabaeus
ENSETEG00000005703	LSM10	100	87.200	ENSCHOG00000008615	LSM10	100	87.200	Choloepus_hoffmanni
ENSETEG00000005703	LSM10	84	31.373	ENSCSAVG00000001896	-	87	31.373	Ciona_savignyi
ENSETEG00000005703	LSM10	100	88.618	ENSCANG00000019928	LSM10	100	88.618	Colobus_angolensis_palliatus
ENSETEG00000005703	LSM10	98	91.736	ENSCGRG00001004317	-	99	91.736	Cricetulus_griseus_chok1gshd
ENSETEG00000005703	LSM10	93	81.197	ENSCGRG00001022673	-	94	81.197	Cricetulus_griseus_chok1gshd
ENSETEG00000005703	LSM10	98	91.736	ENSCGRG00000014935	-	99	91.736	Cricetulus_griseus_crigri
ENSETEG00000005703	LSM10	93	81.197	ENSCGRG00000015514	-	94	81.197	Cricetulus_griseus_crigri
ENSETEG00000005703	LSM10	94	62.931	ENSCSEG00000010374	oscp1a	77	63.478	Cynoglossus_semilaevis
ENSETEG00000005703	LSM10	97	65.812	ENSCVAG00000001536	oscp1a	90	65.812	Cyprinodon_variegatus
ENSETEG00000005703	LSM10	70	71.765	ENSDARG00000109563	CABZ01074453.1	99	71.765	Danio_rerio
ENSETEG00000005703	LSM10	98	72.500	ENSDARG00000101222	oscp1a	100	72.500	Danio_rerio
ENSETEG00000005703	LSM10	99	90.984	ENSDNOG00000036662	LSM10	99	90.984	Dasypus_novemcinctus
ENSETEG00000005703	LSM10	100	91.057	ENSDORG00000007579	Lsm10	100	91.057	Dipodomys_ordii
ENSETEG00000005703	LSM10	95	53.846	ENSEBUG00000001312	oscp1a	96	53.846	Eptatretus_burgeri
ENSETEG00000005703	LSM10	100	91.870	ENSEASG00005012194	LSM10	100	91.870	Equus_asinus_asinus
ENSETEG00000005703	LSM10	100	92.683	ENSECAG00000005071	LSM10	100	92.683	Equus_caballus
ENSETEG00000005703	LSM10	100	89.431	ENSEEUG00000012032	LSM10	100	89.431	Erinaceus_europaeus
ENSETEG00000005703	LSM10	99	66.393	ENSELUG00000007452	oscp1a	100	66.393	Esox_lucius
ENSETEG00000005703	LSM10	100	70.732	ENSFALG00000000851	LSM10	100	70.732	Ficedula_albicollis
ENSETEG00000005703	LSM10	100	88.618	ENSFDAG00000021056	LSM10	100	88.618	Fukomys_damarensis
ENSETEG00000005703	LSM10	88	68.182	ENSFHEG00000001058	oscp1a	95	68.182	Fundulus_heteroclitus
ENSETEG00000005703	LSM10	96	62.069	ENSGMOG00000019832	oscp1a	97	62.069	Gadus_morhua
ENSETEG00000005703	LSM10	100	73.171	ENSGALG00000002127	LSM10	100	73.171	Gallus_gallus
ENSETEG00000005703	LSM10	94	58.824	ENSGAFG00000016445	oscp1a	95	58.824	Gambusia_affinis
ENSETEG00000005703	LSM10	94	63.793	ENSGACG00000002329	oscp1a	95	63.793	Gasterosteus_aculeatus
ENSETEG00000005703	LSM10	100	73.984	ENSGAGG00000024848	LSM10	100	73.984	Gopherus_agassizii
ENSETEG00000005703	LSM10	100	88.618	ENSGGOG00000003556	LSM10	100	88.618	Gorilla_gorilla
ENSETEG00000005703	LSM10	94	66.379	ENSHBUG00000001722	oscp1a	94	66.379	Haplochromis_burtoni
ENSETEG00000005703	LSM10	100	89.431	ENSHGLG00000011625	LSM10	100	89.431	Heterocephalus_glaber_female
ENSETEG00000005703	LSM10	100	89.431	ENSHGLG00100001769	LSM10	100	89.431	Heterocephalus_glaber_male
ENSETEG00000005703	LSM10	87	69.524	ENSIPUG00000005808	oscp1a	91	69.524	Ictalurus_punctatus
ENSETEG00000005703	LSM10	100	91.870	ENSSTOG00000000606	LSM10	100	91.870	Ictidomys_tridecemlineatus
ENSETEG00000005703	LSM10	94	64.655	ENSKMAG00000012143	oscp1a	96	64.655	Kryptolebias_marmoratus
ENSETEG00000005703	LSM10	98	63.333	ENSLBEG00000017764	oscp1a	98	63.333	Labrus_bergylta
ENSETEG00000005703	LSM10	100	73.171	ENSLACG00000015904	LSM10	95	73.171	Latimeria_chalumnae
ENSETEG00000005703	LSM10	98	70.000	ENSLOCG00000018277	oscp1a	98	70.000	Lepisosteus_oculatus
ENSETEG00000005703	LSM10	100	95.041	ENSLAFG00000009600	LSM10	100	95.041	Loxodonta_africana
ENSETEG00000005703	LSM10	100	88.618	ENSMFAG00000009115	LSM10	100	88.618	Macaca_fascicularis
ENSETEG00000005703	LSM10	100	88.618	ENSMMUG00000017338	LSM10	100	88.618	Macaca_mulatta
ENSETEG00000005703	LSM10	100	88.618	ENSMNEG00000020023	LSM10	100	88.618	Macaca_nemestrina
ENSETEG00000005703	LSM10	100	88.618	ENSMLEG00000025150	LSM10	100	88.618	Mandrillus_leucophaeus
ENSETEG00000005703	LSM10	100	64.228	ENSMAMG00000004427	oscp1a	100	64.228	Mastacembelus_armatus
ENSETEG00000005703	LSM10	94	66.379	ENSMZEG00005026307	oscp1a	94	66.379	Maylandia_zebra
ENSETEG00000005703	LSM10	100	72.358	ENSMGAG00000015707	LSM10	100	72.358	Meleagris_gallopavo
ENSETEG00000005703	LSM10	98	89.256	ENSMAUG00000016624	Lsm10	99	89.256	Mesocricetus_auratus
ENSETEG00000005703	LSM10	98	90.083	ENSMOCG00000021943	Lsm10	99	90.083	Microtus_ochrogaster
ENSETEG00000005703	LSM10	95	64.957	ENSMMOG00000013597	oscp1a	87	64.957	Mola_mola
ENSETEG00000005703	LSM10	100	82.114	ENSMODG00000023328	LSM10	100	82.114	Monodelphis_domestica
ENSETEG00000005703	LSM10	57	59.459	ENSMALG00000012661	oscp1a	58	59.459	Monopterus_albus
ENSETEG00000005703	LSM10	98	90.083	MGP_CAROLIEiJ_G0026467	Lsm10	100	95.699	Mus_caroli
ENSETEG00000005703	LSM10	98	90.909	ENSMUSG00000050188	Lsm10	100	96.774	Mus_musculus
ENSETEG00000005703	LSM10	98	90.909	MGP_PahariEiJ_G0028798	Lsm10	100	96.774	Mus_pahari
ENSETEG00000005703	LSM10	98	90.909	MGP_SPRETEiJ_G0027446	Lsm10	100	96.774	Mus_spretus
ENSETEG00000005703	LSM10	100	92.683	ENSMPUG00000018593	LSM10	100	92.683	Mustela_putorius_furo
ENSETEG00000005703	LSM10	100	87.805	ENSMLUG00000023895	LSM10	100	87.805	Myotis_lucifugus
ENSETEG00000005703	LSM10	100	92.683	ENSNGAG00000015011	Lsm10	100	92.683	Nannospalax_galili
ENSETEG00000005703	LSM10	94	67.241	ENSNBRG00000014306	oscp1a	94	67.241	Neolamprologus_brichardi
ENSETEG00000005703	LSM10	100	88.618	ENSNLEG00000033754	LSM10	100	88.618	Nomascus_leucogenys
ENSETEG00000005703	LSM10	100	81.301	ENSMEUG00000006313	LSM10	100	81.301	Notamacropus_eugenii
ENSETEG00000005703	LSM10	100	90.244	ENSOPRG00000001699	LSM10	100	90.244	Ochotona_princeps
ENSETEG00000005703	LSM10	100	91.870	ENSODEG00000019161	LSM10	100	91.870	Octodon_degus
ENSETEG00000005703	LSM10	94	67.241	ENSONIG00000020904	oscp1a	95	67.241	Oreochromis_niloticus
ENSETEG00000005703	LSM10	100	75.610	ENSOANG00000002066	LSM10	100	75.610	Ornithorhynchus_anatinus
ENSETEG00000005703	LSM10	100	87.805	ENSOCUG00000005333	LSM10	100	87.805	Oryctolagus_cuniculus
ENSETEG00000005703	LSM10	95	64.957	ENSORLG00000009504	oscp1a	97	64.957	Oryzias_latipes
ENSETEG00000005703	LSM10	95	64.957	ENSORLG00020016201	oscp1a	97	64.957	Oryzias_latipes_hni
ENSETEG00000005703	LSM10	95	66.957	ENSORLG00015007794	oscp1a	97	66.957	Oryzias_latipes_hsok
ENSETEG00000005703	LSM10	100	92.683	ENSOGAG00000002653	LSM10	100	92.683	Otolemur_garnettii
ENSETEG00000005703	LSM10	98	90.833	ENSOARG00000009596	LSM10	98	90.833	Ovis_aries
ENSETEG00000005703	LSM10	100	87.805	ENSPPAG00000023465	LSM10	100	87.805	Pan_paniscus
ENSETEG00000005703	LSM10	100	91.870	ENSPPRG00000014619	LSM10	100	91.870	Panthera_pardus
ENSETEG00000005703	LSM10	100	91.870	ENSPTIG00000004613	LSM10	100	91.870	Panthera_tigris_altaica
ENSETEG00000005703	LSM10	100	87.805	ENSPTRG00000000539	LSM10	100	87.805	Pan_troglodytes
ENSETEG00000005703	LSM10	100	88.618	ENSPANG00000023172	LSM10	100	88.618	Papio_anubis
ENSETEG00000005703	LSM10	98	64.167	ENSPKIG00000003728	oscp1a	97	64.167	Paramormyrops_kingsleyae
ENSETEG00000005703	LSM10	100	72.358	ENSPSIG00000000590	LSM10	100	72.358	Pelodiscus_sinensis
ENSETEG00000005703	LSM10	63	64.474	ENSPMGG00000015718	oscp1a	99	64.474	Periophthalmus_magnuspinnatus
ENSETEG00000005703	LSM10	85	85.437	ENSPCIG00000014865	LSM10	76	85.437	Phascolarctos_cinereus
ENSETEG00000005703	LSM10	92	65.487	ENSPFOG00000020490	oscp1a	96	65.487	Poecilia_formosa
ENSETEG00000005703	LSM10	92	65.487	ENSPLAG00000016537	oscp1a	86	65.487	Poecilia_latipinna
ENSETEG00000005703	LSM10	88	66.055	ENSPMEG00000000174	oscp1a	95	66.055	Poecilia_mexicana
ENSETEG00000005703	LSM10	92	64.602	ENSPREG00000009899	oscp1a	86	64.602	Poecilia_reticulata
ENSETEG00000005703	LSM10	100	87.805	ENSPPYG00000001539	LSM10	100	87.805	Pongo_abelii
ENSETEG00000005703	LSM10	96	96.552	ENSPCAG00000002520	LSM10	97	96.552	Procavia_capensis
ENSETEG00000005703	LSM10	100	88.618	ENSPVAG00000008644	LSM10	100	88.618	Pteropus_vampyrus
ENSETEG00000005703	LSM10	94	66.379	ENSPNYG00000003138	oscp1a	94	66.379	Pundamilia_nyererei
ENSETEG00000005703	LSM10	95	67.241	ENSPNAG00000028829	oscp1a	97	67.241	Pygocentrus_nattereri
ENSETEG00000005703	LSM10	98	91.736	ENSRNOG00000025716	Lsm10	99	91.736	Rattus_norvegicus
ENSETEG00000005703	LSM10	100	88.618	ENSRBIG00000001561	LSM10	100	88.618	Rhinopithecus_bieti
ENSETEG00000005703	LSM10	100	88.618	ENSRROG00000011414	LSM10	100	88.618	Rhinopithecus_roxellana
ENSETEG00000005703	LSM10	100	87.805	ENSSBOG00000036413	-	100	87.805	Saimiri_boliviensis_boliviensis
ENSETEG00000005703	LSM10	100	80.488	ENSSHAG00000018056	LSM10	100	80.488	Sarcophilus_harrisii
ENSETEG00000005703	LSM10	98	65.289	ENSSFOG00015019954	lsm10	99	65.289	Scleropages_formosus
ENSETEG00000005703	LSM10	93	65.217	ENSSMAG00000001297	oscp1a	98	65.217	Scophthalmus_maximus
ENSETEG00000005703	LSM10	97	66.387	ENSSDUG00000007090	oscp1a	96	66.387	Seriola_dumerili
ENSETEG00000005703	LSM10	97	67.227	ENSSLDG00000000800	oscp1a	98	67.227	Seriola_lalandi_dorsalis
ENSETEG00000005703	LSM10	100	89.600	ENSSARG00000004211	LSM10	100	90.400	Sorex_araneus
ENSETEG00000005703	LSM10	95	64.957	ENSSPAG00000009229	oscp1a	97	64.957	Stegastes_partitus
ENSETEG00000005703	LSM10	100	90.083	ENSSSCG00000038916	LSM10	100	90.083	Sus_scrofa
ENSETEG00000005703	LSM10	99	70.492	ENSTGUG00000001600	-	100	70.492	Taeniopygia_guttata
ENSETEG00000005703	LSM10	99	70.492	ENSTGUG00000001602	-	100	70.492	Taeniopygia_guttata
ENSETEG00000005703	LSM10	95	66.667	ENSTRUG00000010531	oscp1a	94	66.667	Takifugu_rubripes
ENSETEG00000005703	LSM10	100	89.431	ENSTBEG00000016674	LSM10	100	89.431	Tupaia_belangeri
ENSETEG00000005703	LSM10	100	90.244	ENSUAMG00000020265	LSM10	100	90.244	Ursus_americanus
ENSETEG00000005703	LSM10	100	90.244	ENSUMAG00000001438	LSM10	57	90.244	Ursus_maritimus
ENSETEG00000005703	LSM10	100	92.683	ENSVVUG00000023209	LSM10	100	92.683	Vulpes_vulpes
ENSETEG00000005703	LSM10	100	71.074	ENSXETG00000027631	lsm10	100	71.074	Xenopus_tropicalis
ENSETEG00000005703	LSM10	93	63.478	ENSXCOG00000018776	oscp1a	72	63.478	Xiphophorus_couchianus
ENSETEG00000005703	LSM10	96	61.157	ENSXMAG00000019963	oscp1a	97	61.157	Xiphophorus_maculatus