EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000005819 (Gene tree)
Gene ID: -
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 38119 bases
Position: chrGeneScaffold_9027:225123-263241
Accession: 25502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000004728	TRM13	PF05206.14	5.8e-74	1	1
ENSETEP00000004728	zf-U11-48K	PF05253.12	2.8e-09	1	1
ENSETEP00000004728	zf-TRM13_CCCH	PF11722.8	1.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000005820	TRMT13-201	1452	-	ENSETEP00000004728	483 (aa)	-	UPI0000E40F20

Gene Model

Click here to download ENSETEG00000005819's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000005819's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000005819	TRMT13	99	75.992	ENSG00000122435	TRMT13	99	83.929	Homo_sapiens
ENSETEG00000005819	TRMT13	96	44.246	ENSAPOG00000015131	trmt13	99	44.444	Acanthochromis_polyacanthus
ENSETEG00000005819	TRMT13	99	76.409	ENSAMEG00000008917	TRMT13	99	76.409	Ailuropoda_melanoleuca
ENSETEG00000005819	TRMT13	96	46.316	ENSACIG00000005804	trmt13	96	45.021	Amphilophus_citrinellus
ENSETEG00000005819	TRMT13	96	44.444	ENSAOCG00000023585	trmt13	99	44.444	Amphiprion_ocellaris
ENSETEG00000005819	TRMT13	96	44.314	ENSAPEG00000004025	trmt13	99	44.314	Amphiprion_percula
ENSETEG00000005819	TRMT13	97	45.248	ENSATEG00000006597	trmt13	97	45.248	Anabas_testudineus
ENSETEG00000005819	TRMT13	87	57.412	ENSAPLG00000014924	TRMT13	99	57.412	Anas_platyrhynchos
ENSETEG00000005819	TRMT13	96	54.292	ENSACAG00000003498	TRMT13	98	54.292	Anolis_carolinensis
ENSETEG00000005819	TRMT13	99	75.783	ENSANAG00000019525	TRMT13	99	85.714	Aotus_nancymaae
ENSETEG00000005819	TRMT13	96	46.218	ENSACLG00000020018	trmt13	99	46.218	Astatotilapia_calliptera
ENSETEG00000005819	TRMT13	96	47.983	ENSAMXG00000017963	trmt13	97	47.983	Astyanax_mexicanus
ENSETEG00000005819	TRMT13	99	75.365	ENSBTAG00000015781	TRMT13	99	75.365	Bos_taurus
ENSETEG00000005819	TRMT13	99	74.739	ENSCJAG00000000200	TRMT13	98	85.714	Callithrix_jacchus
ENSETEG00000005819	TRMT13	64	78.896	ENSCAFG00000020021	TRMT13	97	78.896	Canis_familiaris
ENSETEG00000005819	TRMT13	57	73.646	ENSCAFG00020011572	TRMT13	95	73.646	Canis_lupus_dingo
ENSETEG00000005819	TRMT13	99	75.417	ENSCHIG00000015395	TRMT13	99	75.417	Capra_hircus
ENSETEG00000005819	TRMT13	98	66.046	ENSTSYG00000010811	TRMT13	98	81.553	Carlito_syrichta
ENSETEG00000005819	TRMT13	53	93.939	ENSCAPG00000009085	TRMT13	95	57.593	Cavia_aperea
ENSETEG00000005819	TRMT13	99	74.322	ENSCPOG00000000694	TRMT13	99	74.322	Cavia_porcellus
ENSETEG00000005819	TRMT13	99	75.574	ENSCCAG00000023772	TRMT13	99	84.821	Cebus_capucinus
ENSETEG00000005819	TRMT13	99	75.992	ENSCATG00000033556	TRMT13	99	86.607	Cercocebus_atys
ENSETEG00000005819	TRMT13	87	70.071	ENSCLAG00000008220	TRMT13	99	70.423	Chinchilla_lanigera
ENSETEG00000005819	TRMT13	99	75.992	ENSCSAG00000001506	TRMT13	99	75.992	Chlorocebus_sabaeus
ENSETEG00000005819	TRMT13	98	59.205	ENSCPBG00000026671	TRMT13	99	59.205	Chrysemys_picta_bellii
ENSETEG00000005819	TRMT13	99	76.200	ENSCANG00000034659	TRMT13	99	85.714	Colobus_angolensis_palliatus
ENSETEG00000005819	TRMT13	99	70.833	ENSCGRG00001021601	Trmt13	99	70.833	Cricetulus_griseus_chok1gshd
ENSETEG00000005819	TRMT13	95	43.683	ENSCSEG00000000591	trmt13	97	43.683	Cynoglossus_semilaevis
ENSETEG00000005819	TRMT13	96	43.478	ENSCVAG00000017342	trmt13	93	43.892	Cyprinodon_variegatus
ENSETEG00000005819	TRMT13	96	50.749	ENSDARG00000102846	trmt13	96	50.749	Danio_rerio
ENSETEG00000005819	TRMT13	57	71.377	ENSDNOG00000001710	TRMT13	84	71.377	Dasypus_novemcinctus
ENSETEG00000005819	TRMT13	99	72.443	ENSDORG00000015808	Trmt13	99	72.443	Dipodomys_ordii
ENSETEG00000005819	TRMT13	95	41.469	ENSEBUG00000014444	trmt13	96	41.469	Eptatretus_burgeri
ENSETEG00000005819	TRMT13	99	77.035	ENSEASG00005015918	TRMT13	99	77.035	Equus_asinus_asinus
ENSETEG00000005819	TRMT13	99	77.244	ENSECAG00000022626	TRMT13	99	77.244	Equus_caballus
ENSETEG00000005819	TRMT13	78	75.862	ENSEEUG00000000294	TRMT13	78	75.862	Erinaceus_europaeus
ENSETEG00000005819	TRMT13	98	46.973	ENSELUG00000003803	trmt13	99	47.071	Esox_lucius
ENSETEG00000005819	TRMT13	99	76.409	ENSFCAG00000030618	TRMT13	99	86.607	Felis_catus
ENSETEG00000005819	TRMT13	99	55.625	ENSFALG00000002424	TRMT13	99	55.625	Ficedula_albicollis
ENSETEG00000005819	TRMT13	99	74.530	ENSFDAG00000006342	TRMT13	98	74.530	Fukomys_damarensis
ENSETEG00000005819	TRMT13	80	44.332	ENSFHEG00000022954	trmt13	97	45.545	Fundulus_heteroclitus
ENSETEG00000005819	TRMT13	95	44.227	ENSGMOG00000013223	trmt13	100	44.662	Gadus_morhua
ENSETEG00000005819	TRMT13	96	55.628	ENSGALG00000005290	TRMT13	96	55.724	Gallus_gallus
ENSETEG00000005819	TRMT13	76	44.415	ENSGAFG00000001577	trmt13	81	44.415	Gambusia_affinis
ENSETEG00000005819	TRMT13	96	44.703	ENSGACG00000013428	trmt13	97	45.339	Gasterosteus_aculeatus
ENSETEG00000005819	TRMT13	96	60.385	ENSGAGG00000023303	TRMT13	96	60.385	Gopherus_agassizii
ENSETEG00000005819	TRMT13	99	75.365	ENSGGOG00000005616	TRMT13	99	83.036	Gorilla_gorilla
ENSETEG00000005819	TRMT13	96	46.709	ENSHBUG00000007754	trmt13	98	46.709	Haplochromis_burtoni
ENSETEG00000005819	TRMT13	99	75.157	ENSHGLG00000002164	TRMT13	98	75.157	Heterocephalus_glaber_female
ENSETEG00000005819	TRMT13	99	75.157	ENSHGLG00100001618	TRMT13	98	75.157	Heterocephalus_glaber_male
ENSETEG00000005819	TRMT13	98	41.701	ENSHCOG00000020553	trmt13	97	42.050	Hippocampus_comes
ENSETEG00000005819	TRMT13	96	49.676	ENSIPUG00000024787	trmt13	98	49.244	Ictalurus_punctatus
ENSETEG00000005819	TRMT13	99	76.458	ENSSTOG00000013483	TRMT13	99	76.458	Ictidomys_tridecemlineatus
ENSETEG00000005819	TRMT13	97	73.404	ENSJJAG00000018012	Trmt13	98	73.404	Jaculus_jaculus
ENSETEG00000005819	TRMT13	63	45.425	ENSKMAG00000007639	trmt13	92	45.425	Kryptolebias_marmoratus
ENSETEG00000005819	TRMT13	97	44.742	ENSLBEG00000020238	trmt13	99	45.062	Labrus_bergylta
ENSETEG00000005819	TRMT13	98	53.165	ENSLACG00000013153	TRMT13	99	53.165	Latimeria_chalumnae
ENSETEG00000005819	TRMT13	96	50.644	ENSLOCG00000000418	trmt13	97	50.647	Lepisosteus_oculatus
ENSETEG00000005819	TRMT13	72	78.324	ENSLAFG00000002383	TRMT13	94	78.324	Loxodonta_africana
ENSETEG00000005819	TRMT13	99	75.783	ENSMFAG00000034681	TRMT13	99	85.714	Macaca_fascicularis
ENSETEG00000005819	TRMT13	99	75.783	ENSMMUG00000004243	TRMT13	99	85.714	Macaca_mulatta
ENSETEG00000005819	TRMT13	99	75.783	ENSMNEG00000036102	TRMT13	99	85.714	Macaca_nemestrina
ENSETEG00000005819	TRMT13	99	75.574	ENSMLEG00000034258	TRMT13	99	84.821	Mandrillus_leucophaeus
ENSETEG00000005819	TRMT13	95	46.269	ENSMAMG00000016597	trmt13	95	46.269	Mastacembelus_armatus
ENSETEG00000005819	TRMT13	96	45.957	ENSMZEG00005020959	trmt13	98	45.957	Maylandia_zebra
ENSETEG00000005819	TRMT13	88	57.920	ENSMGAG00000006970	TRMT13	99	57.920	Meleagris_gallopavo
ENSETEG00000005819	TRMT13	99	69.937	ENSMAUG00000010448	Trmt13	99	69.937	Mesocricetus_auratus
ENSETEG00000005819	TRMT13	99	76.827	ENSMICG00000005283	TRMT13	99	86.607	Microcebus_murinus
ENSETEG00000005819	TRMT13	99	68.191	ENSMOCG00000019914	Trmt13	99	68.191	Microtus_ochrogaster
ENSETEG00000005819	TRMT13	54	41.264	ENSMMOG00000007762	trmt13	89	41.264	Mola_mola
ENSETEG00000005819	TRMT13	99	64.092	ENSMODG00000003646	TRMT13	99	64.092	Monodelphis_domestica
ENSETEG00000005819	TRMT13	97	45.629	ENSMALG00000020965	trmt13	97	45.629	Monopterus_albus
ENSETEG00000005819	TRMT13	99	71.190	MGP_CAROLIEiJ_G0025568	Trmt13	97	73.563	Mus_caroli
ENSETEG00000005819	TRMT13	99	71.190	ENSMUSG00000033439	Trmt13	99	71.190	Mus_musculus
ENSETEG00000005819	TRMT13	99	70.981	MGP_PahariEiJ_G0027014	Trmt13	99	70.981	Mus_pahari
ENSETEG00000005819	TRMT13	99	71.608	MGP_SPRETEiJ_G0026518	Trmt13	99	71.608	Mus_spretus
ENSETEG00000005819	TRMT13	78	74.400	ENSMPUG00000002078	-	98	74.400	Mustela_putorius_furo
ENSETEG00000005819	TRMT13	100	67.702	ENSMLUG00000002124	TRMT13	99	67.702	Myotis_lucifugus
ENSETEG00000005819	TRMT13	96	45.073	ENSNBRG00000006783	trmt13	95	43.803	Neolamprologus_brichardi
ENSETEG00000005819	TRMT13	99	75.574	ENSNLEG00000035917	TRMT13	99	83.929	Nomascus_leucogenys
ENSETEG00000005819	TRMT13	66	86.364	ENSOPRG00000012048	TRMT13	66	86.364	Ochotona_princeps
ENSETEG00000005819	TRMT13	96	47.170	ENSONIG00000004574	trmt13	98	47.134	Oreochromis_niloticus
ENSETEG00000005819	TRMT13	89	62.326	ENSOANG00000012057	TRMT13	99	62.326	Ornithorhynchus_anatinus
ENSETEG00000005819	TRMT13	99	75.000	ENSOCUG00000023095	TRMT13	99	75.000	Oryctolagus_cuniculus
ENSETEG00000005819	TRMT13	96	42.469	ENSORLG00000003320	trmt13	98	42.887	Oryzias_latipes
ENSETEG00000005819	TRMT13	96	42.766	ENSORLG00020005972	trmt13	97	43.683	Oryzias_latipes_hni
ENSETEG00000005819	TRMT13	96	46.737	ENSORLG00015002270	trmt13	98	46.512	Oryzias_latipes_hsok
ENSETEG00000005819	TRMT13	97	45.684	ENSOMEG00000006724	trmt13	94	45.684	Oryzias_melastigma
ENSETEG00000005819	TRMT13	99	76.310	ENSOGAG00000005618	TRMT13	96	76.409	Otolemur_garnettii
ENSETEG00000005819	TRMT13	99	75.417	ENSOARG00000017983	TRMT13	99	75.417	Ovis_aries
ENSETEG00000005819	TRMT13	99	75.365	ENSPPAG00000043736	TRMT13	99	83.929	Pan_paniscus
ENSETEG00000005819	TRMT13	99	76.618	ENSPPRG00000003424	TRMT13	99	86.607	Panthera_pardus
ENSETEG00000005819	TRMT13	99	76.618	ENSPTIG00000018598	TRMT13	99	86.607	Panthera_tigris_altaica
ENSETEG00000005819	TRMT13	99	75.365	ENSPTRG00000001001	TRMT13	99	83.929	Pan_troglodytes
ENSETEG00000005819	TRMT13	99	75.992	ENSPANG00000007598	TRMT13	99	85.714	Papio_anubis
ENSETEG00000005819	TRMT13	96	49.353	ENSPKIG00000001514	trmt13	97	49.353	Paramormyrops_kingsleyae
ENSETEG00000005819	TRMT13	87	57.482	ENSPSIG00000012703	TRMT13	99	57.482	Pelodiscus_sinensis
ENSETEG00000005819	TRMT13	96	45.610	ENSPMGG00000013298	trmt13	93	45.610	Periophthalmus_magnuspinnatus
ENSETEG00000005819	TRMT13	99	70.355	ENSPEMG00000000275	Trmt13	99	70.355	Peromyscus_maniculatus_bairdii
ENSETEG00000005819	TRMT13	95	41.263	ENSPMAG00000000823	trmt13	97	41.263	Petromyzon_marinus
ENSETEG00000005819	TRMT13	98	65.053	ENSPCIG00000007699	TRMT13	99	65.053	Phascolarctos_cinereus
ENSETEG00000005819	TRMT13	96	43.803	ENSPFOG00000008675	trmt13	95	43.803	Poecilia_formosa
ENSETEG00000005819	TRMT13	96	43.125	ENSPLAG00000009709	trmt13	99	43.125	Poecilia_latipinna
ENSETEG00000005819	TRMT13	96	41.226	ENSPMEG00000022954	trmt13	99	41.226	Poecilia_mexicana
ENSETEG00000005819	TRMT13	81	42.260	ENSPREG00000005645	trmt13	91	43.728	Poecilia_reticulata
ENSETEG00000005819	TRMT13	99	75.365	ENSPPYG00000001120	TRMT13	99	75.365	Pongo_abelii
ENSETEG00000005819	TRMT13	99	75.783	ENSPCAG00000002340	TRMT13	99	75.783	Procavia_capensis
ENSETEG00000005819	TRMT13	99	75.783	ENSPCOG00000017984	TRMT13	99	85.714	Propithecus_coquereli
ENSETEG00000005819	TRMT13	99	76.200	ENSPVAG00000017430	TRMT13	99	76.200	Pteropus_vampyrus
ENSETEG00000005819	TRMT13	96	45.283	ENSPNYG00000013690	trmt13	99	45.283	Pundamilia_nyererei
ENSETEG00000005819	TRMT13	96	49.465	ENSPNAG00000022130	trmt13	97	49.465	Pygocentrus_nattereri
ENSETEG00000005819	TRMT13	99	71.608	ENSRNOG00000015140	Trmt13	96	71.608	Rattus_norvegicus
ENSETEG00000005819	TRMT13	99	76.200	ENSRBIG00000037686	TRMT13	99	85.714	Rhinopithecus_bieti
ENSETEG00000005819	TRMT13	99	76.200	ENSRROG00000044057	TRMT13	99	85.714	Rhinopithecus_roxellana
ENSETEG00000005819	TRMT13	99	75.157	ENSSBOG00000026541	TRMT13	99	85.714	Saimiri_boliviensis_boliviensis
ENSETEG00000005819	TRMT13	89	64.953	ENSSHAG00000005213	TRMT13	95	64.953	Sarcophilus_harrisii
ENSETEG00000005819	TRMT13	97	46.822	ENSSFOG00015017560	trmt13	98	47.034	Scleropages_formosus
ENSETEG00000005819	TRMT13	96	45.263	ENSSMAG00000014592	trmt13	95	45.263	Scophthalmus_maximus
ENSETEG00000005819	TRMT13	96	45.851	ENSSDUG00000015508	trmt13	96	45.697	Seriola_dumerili
ENSETEG00000005819	TRMT13	96	45.322	ENSSLDG00000019060	trmt13	96	45.322	Seriola_lalandi_dorsalis
ENSETEG00000005819	TRMT13	98	63.789	ENSSARG00000010344	TRMT13	98	63.789	Sorex_araneus
ENSETEG00000005819	TRMT13	95	59.002	ENSSPUG00000016339	TRMT13	99	59.002	Sphenodon_punctatus
ENSETEG00000005819	TRMT13	95	47.425	ENSSPAG00000011922	trmt13	98	47.246	Stegastes_partitus
ENSETEG00000005819	TRMT13	99	76.618	ENSSSCG00000006869	TRMT13	99	76.618	Sus_scrofa
ENSETEG00000005819	TRMT13	96	57.019	ENSTGUG00000005253	TRMT13	98	57.019	Taeniopygia_guttata
ENSETEG00000005819	TRMT13	97	45.208	ENSTRUG00000008400	trmt13	99	45.208	Takifugu_rubripes
ENSETEG00000005819	TRMT13	85	73.902	ENSTBEG00000008911	TRMT13	99	73.902	Tupaia_belangeri
ENSETEG00000005819	TRMT13	99	74.739	ENSUAMG00000017251	TRMT13	99	74.739	Ursus_americanus
ENSETEG00000005819	TRMT13	99	76.618	ENSUMAG00000007901	TRMT13	99	76.618	Ursus_maritimus
ENSETEG00000005819	TRMT13	88	80.094	ENSVPAG00000001034	TRMT13	99	80.094	Vicugna_pacos
ENSETEG00000005819	TRMT13	99	77.453	ENSVVUG00000021996	TRMT13	99	77.453	Vulpes_vulpes
ENSETEG00000005819	TRMT13	96	50.216	ENSXETG00000013204	trmt13	96	50.216	Xenopus_tropicalis
ENSETEG00000005819	TRMT13	96	42.616	ENSXMAG00000010765	trmt13	99	42.616	Xiphophorus_maculatus