EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSETEG00000005963 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 30641 bases
Position: chrGeneScaffold_8747:20790-51430
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000004843	MMR_HSR1	PF01926.23	4.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000005963	-	516	-	ENSETEP00000004843	172 (aa)	-	UPI0000E42B44

Gene Model

Click here to download ENSETEG00000005963's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000005963's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSETEG00000005963	-	94	37.267	ENSETEG00000002205	RAB1A	80	37.267
ENSETEG00000005963	-	88	33.129	ENSETEG00000005614	RASL11B	64	33.129
ENSETEG00000005963	-	95	31.548	ENSETEG00000018698	RAB9B	83	31.548
ENSETEG00000005963	-	94	36.646	ENSETEG00000010340	RAB2A	76	36.646
ENSETEG00000005963	-	90	36.774	ENSETEG00000000905	-	71	36.774
ENSETEG00000005963	-	70	42.975	ENSETEG00000009412	-	58	42.975
ENSETEG00000005963	-	92	32.317	ENSETEG00000010802	RERG	80	32.317
ENSETEG00000005963	-	91	36.943	ENSETEG00000004920	RAB11A	72	36.943
ENSETEG00000005963	-	88	38.562	ENSETEG00000003629	RAB33B	67	38.562
ENSETEG00000005963	-	93	37.037	ENSETEG00000009624	RAB39B	76	37.037
ENSETEG00000005963	-	81	50.676	ENSETEG00000008991	-	96	50.676
ENSETEG00000005963	-	88	31.373	ENSETEG00000016304	MRAS	73	31.373

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000005963	-	97	71.687	ENSACAG00000009389	-	99	71.687	Anolis_carolinensis
ENSETEG00000005963	-	96	63.030	ENSEEUG00000001438	-	99	63.030	Erinaceus_europaeus
ENSETEG00000005963	-	94	67.284	ENSGMOG00000006968	-	81	67.284	Gadus_morhua
ENSETEG00000005963	-	97	70.659	ENSGACG00000013611	-	82	70.659	Gasterosteus_aculeatus
ENSETEG00000005963	-	98	72.619	ENSLACG00000016518	-	53	72.619	Latimeria_chalumnae
ENSETEG00000005963	-	81	89.041	ENSLAFG00000016780	-	100	89.041	Loxodonta_africana
ENSETEG00000005963	-	96	87.879	ENSMLUG00000016268	-	100	87.879	Myotis_lucifugus
ENSETEG00000005963	-	97	78.443	ENSMEUG00000015626	-	100	78.443	Notamacropus_eugenii
ENSETEG00000005963	-	98	90.476	ENSOPRG00000007436	-	98	90.476	Ochotona_princeps
ENSETEG00000005963	-	96	76.970	ENSPSIG00000008757	-	85	76.970	Pelodiscus_sinensis
ENSETEG00000005963	-	99	71.930	ENSPCAG00000001228	-	99	71.930	Procavia_capensis
ENSETEG00000005963	-	96	78.788	ENSSHAG00000006833	-	99	78.788	Sarcophilus_harrisii
ENSETEG00000005963	-	96	75.152	ENSTGUG00000013171	-	99	75.152	Taeniopygia_guttata
ENSETEG00000005963	-	99	84.118	ENSTTRG00000002070	-	98	84.118	Tursiops_truncatus