EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000006022 (Gene tree)
Gene ID: -
Gene Symbol: CPSF1
Alias: CPSF160
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 16563 bases
Position: chrGeneScaffold_652:5-16567
Accession: 2324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000004888	CPSF_A	PF03178.15	8.6e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000006023	CPSF1-201	4164	-	ENSETEP00000004888	1388 (aa)	-	UPI0000E41655

Gene Model

Click here to download ENSETEG00000006022's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000006022's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000006022	CPSF1	83	97.315	ENSG00000071894	CPSF1	88	90.299	Homo_sapiens
ENSETEG00000006022	CPSF1	83	85.906	ENSAPOG00000019621	cpsf1	81	85.906	Acanthochromis_polyacanthus
ENSETEG00000006022	CPSF1	79	88.565	ENSAMEG00000005557	CPSF1	79	88.565	Ailuropoda_melanoleuca
ENSETEG00000006022	CPSF1	83	83.893	ENSACIG00000006112	cpsf1	81	83.893	Amphilophus_citrinellus
ENSETEG00000006022	CPSF1	83	85.906	ENSAOCG00000007120	cpsf1	80	85.906	Amphiprion_ocellaris
ENSETEG00000006022	CPSF1	83	85.906	ENSAPEG00000005755	cpsf1	80	85.906	Amphiprion_percula
ENSETEG00000006022	CPSF1	83	85.235	ENSATEG00000011097	cpsf1	81	85.235	Anabas_testudineus
ENSETEG00000006022	CPSF1	77	91.111	ENSACAG00000009655	CPSF1	82	91.111	Anolis_carolinensis
ENSETEG00000006022	CPSF1	83	97.315	ENSANAG00000036514	CPSF1	80	97.315	Aotus_nancymaae
ENSETEG00000006022	CPSF1	83	83.893	ENSACLG00000012231	cpsf1	80	83.893	Astatotilapia_calliptera
ENSETEG00000006022	CPSF1	83	87.248	ENSAMXG00000008485	cpsf1	81	87.248	Astyanax_mexicanus
ENSETEG00000006022	CPSF1	83	99.329	ENSBTAG00000008355	CPSF1	79	99.329	Bos_taurus
ENSETEG00000006022	CPSF1	81	39.062	WBGene00022301	cpsf-1	78	39.062	Caenorhabditis_elegans
ENSETEG00000006022	CPSF1	83	96.644	ENSCJAG00000021421	CPSF1	80	96.644	Callithrix_jacchus
ENSETEG00000006022	CPSF1	79	98.658	ENSCAFG00000001600	CPSF1	79	98.658	Canis_familiaris
ENSETEG00000006022	CPSF1	83	98.658	ENSCAFG00020020821	CPSF1	80	98.658	Canis_lupus_dingo
ENSETEG00000006022	CPSF1	83	88.549	ENSCHIG00000015833	CPSF1	80	88.549	Capra_hircus
ENSETEG00000006022	CPSF1	83	97.987	ENSTSYG00000028560	CPSF1	83	97.987	Carlito_syrichta
ENSETEG00000006022	CPSF1	79	97.987	ENSCAPG00000014921	CPSF1	79	97.987	Cavia_aperea
ENSETEG00000006022	CPSF1	83	97.987	ENSCPOG00000011448	CPSF1	80	97.987	Cavia_porcellus
ENSETEG00000006022	CPSF1	83	97.315	ENSCCAG00000037658	CPSF1	80	97.315	Cebus_capucinus
ENSETEG00000006022	CPSF1	83	97.315	ENSCATG00000037234	CPSF1	80	97.315	Cercocebus_atys
ENSETEG00000006022	CPSF1	83	97.987	ENSCLAG00000012166	CPSF1	80	97.987	Chinchilla_lanigera
ENSETEG00000006022	CPSF1	83	97.315	ENSCSAG00000008502	CPSF1	80	97.315	Chlorocebus_sabaeus
ENSETEG00000006022	CPSF1	83	91.946	ENSCPBG00000018910	CPSF1	78	91.946	Chrysemys_picta_bellii
ENSETEG00000006022	CPSF1	82	49.254	ENSCING00000000514	-	82	49.254	Ciona_intestinalis
ENSETEG00000006022	CPSF1	83	46.667	ENSCSAVG00000002293	-	80	46.667	Ciona_savignyi
ENSETEG00000006022	CPSF1	80	96.850	ENSCANG00000032760	CPSF1	79	96.850	Colobus_angolensis_palliatus
ENSETEG00000006022	CPSF1	83	97.987	ENSCGRG00001016344	Cpsf1	80	97.987	Cricetulus_griseus_chok1gshd
ENSETEG00000006022	CPSF1	83	97.987	ENSCGRG00000003118	Cpsf1	80	97.987	Cricetulus_griseus_crigri
ENSETEG00000006022	CPSF1	83	82.550	ENSCSEG00000013464	cpsf1	80	82.550	Cynoglossus_semilaevis
ENSETEG00000006022	CPSF1	68	79.195	ENSCVAG00000014059	cpsf1	68	79.195	Cyprinodon_variegatus
ENSETEG00000006022	CPSF1	83	84.564	ENSDARG00000034178	cpsf1	80	84.564	Danio_rerio
ENSETEG00000006022	CPSF1	79	97.987	ENSDORG00000006278	Cpsf1	79	97.987	Dipodomys_ordii
ENSETEG00000006022	CPSF1	82	50.350	FBgn0024698	Cpsf160	80	50.350	Drosophila_melanogaster
ENSETEG00000006022	CPSF1	83	98.658	ENSEASG00005010774	CPSF1	80	98.658	Equus_asinus_asinus
ENSETEG00000006022	CPSF1	83	98.658	ENSECAG00000022209	CPSF1	80	98.658	Equus_caballus
ENSETEG00000006022	CPSF1	83	97.315	ENSEEUG00000000471	CPSF1	80	97.315	Erinaceus_europaeus
ENSETEG00000006022	CPSF1	83	87.248	ENSELUG00000012271	cpsf1	81	87.248	Esox_lucius
ENSETEG00000006022	CPSF1	83	97.987	ENSFDAG00000016060	CPSF1	80	97.987	Fukomys_damarensis
ENSETEG00000006022	CPSF1	83	79.195	ENSFHEG00000016801	cpsf1	80	79.195	Fundulus_heteroclitus
ENSETEG00000006022	CPSF1	83	82.550	ENSGMOG00000000796	cpsf1	80	82.550	Gadus_morhua
ENSETEG00000006022	CPSF1	77	69.442	ENSGAFG00000018890	cpsf1	79	69.736	Gambusia_affinis
ENSETEG00000006022	CPSF1	83	82.550	ENSGACG00000008703	cpsf1	80	82.550	Gasterosteus_aculeatus
ENSETEG00000006022	CPSF1	82	80.845	ENSGAGG00000004276	CPSF1	82	80.157	Gopherus_agassizii
ENSETEG00000006022	CPSF1	83	97.315	ENSGGOG00000016185	CPSF1	80	97.315	Gorilla_gorilla
ENSETEG00000006022	CPSF1	83	83.893	ENSHBUG00000018900	cpsf1	80	83.893	Haplochromis_burtoni
ENSETEG00000006022	CPSF1	83	97.987	ENSHGLG00000016139	CPSF1	80	97.987	Heterocephalus_glaber_female
ENSETEG00000006022	CPSF1	83	97.987	ENSHGLG00100009750	CPSF1	80	97.987	Heterocephalus_glaber_male
ENSETEG00000006022	CPSF1	83	83.893	ENSHCOG00000018509	cpsf1	81	83.893	Hippocampus_comes
ENSETEG00000006022	CPSF1	83	85.235	ENSIPUG00000011259	cpsf1	81	85.235	Ictalurus_punctatus
ENSETEG00000006022	CPSF1	79	97.987	ENSSTOG00000009957	CPSF1	79	97.987	Ictidomys_tridecemlineatus
ENSETEG00000006022	CPSF1	83	96.644	ENSJJAG00000023002	Cpsf1	80	96.644	Jaculus_jaculus
ENSETEG00000006022	CPSF1	82	79.866	ENSKMAG00000001940	cpsf1	86	79.866	Kryptolebias_marmoratus
ENSETEG00000006022	CPSF1	83	83.221	ENSLBEG00000003601	cpsf1	81	83.221	Labrus_bergylta
ENSETEG00000006022	CPSF1	70	87.919	ENSLACG00000000233	CPSF1	70	87.919	Latimeria_chalumnae
ENSETEG00000006022	CPSF1	83	88.079	ENSLOCG00000008484	cpsf1	80	88.079	Lepisosteus_oculatus
ENSETEG00000006022	CPSF1	79	97.987	ENSLAFG00000022601	CPSF1	79	97.987	Loxodonta_africana
ENSETEG00000006022	CPSF1	83	97.315	ENSMFAG00000037013	CPSF1	80	97.315	Macaca_fascicularis
ENSETEG00000006022	CPSF1	83	97.315	ENSMMUG00000007380	CPSF1	83	97.315	Macaca_mulatta
ENSETEG00000006022	CPSF1	79	97.315	ENSMNEG00000043564	CPSF1	80	97.315	Macaca_nemestrina
ENSETEG00000006022	CPSF1	83	97.315	ENSMLEG00000043010	CPSF1	81	97.315	Mandrillus_leucophaeus
ENSETEG00000006022	CPSF1	83	85.235	ENSMAMG00000003803	cpsf1	81	85.235	Mastacembelus_armatus
ENSETEG00000006022	CPSF1	83	83.893	ENSMZEG00005001168	cpsf1	79	83.893	Maylandia_zebra
ENSETEG00000006022	CPSF1	83	98.658	ENSMAUG00000003601	Cpsf1	80	98.658	Mesocricetus_auratus
ENSETEG00000006022	CPSF1	83	98.658	ENSMICG00000015767	CPSF1	80	98.658	Microcebus_murinus
ENSETEG00000006022	CPSF1	83	98.658	ENSMOCG00000022758	Cpsf1	80	98.658	Microtus_ochrogaster
ENSETEG00000006022	CPSF1	83	83.221	ENSMMOG00000021245	cpsf1	80	83.221	Mola_mola
ENSETEG00000006022	CPSF1	83	97.315	ENSMODG00000010755	CPSF1	80	97.315	Monodelphis_domestica
ENSETEG00000006022	CPSF1	83	83.893	ENSMALG00000020545	cpsf1	81	83.893	Monopterus_albus
ENSETEG00000006022	CPSF1	83	98.658	MGP_CAROLIEiJ_G0019936	Cpsf1	80	98.658	Mus_caroli
ENSETEG00000006022	CPSF1	83	98.658	ENSMUSG00000034022	Cpsf1	80	98.658	Mus_musculus
ENSETEG00000006022	CPSF1	83	98.658	MGP_PahariEiJ_G0019946	Cpsf1	80	98.658	Mus_pahari
ENSETEG00000006022	CPSF1	83	98.658	MGP_SPRETEiJ_G0020839	Cpsf1	80	98.658	Mus_spretus
ENSETEG00000006022	CPSF1	77	97.315	ENSMPUG00000006419	CPSF1	75	97.315	Mustela_putorius_furo
ENSETEG00000006022	CPSF1	83	97.987	ENSNGAG00000022460	Cpsf1	80	97.987	Nannospalax_galili
ENSETEG00000006022	CPSF1	83	83.893	ENSNBRG00000000813	cpsf1	79	83.893	Neolamprologus_brichardi
ENSETEG00000006022	CPSF1	82	96.212	ENSNLEG00000010633	-	91	96.212	Nomascus_leucogenys
ENSETEG00000006022	CPSF1	78	97.619	ENSMEUG00000014922	CPSF1	78	97.619	Notamacropus_eugenii
ENSETEG00000006022	CPSF1	83	97.987	ENSODEG00000013995	CPSF1	80	97.987	Octodon_degus
ENSETEG00000006022	CPSF1	83	83.893	ENSONIG00000007676	cpsf1	80	83.893	Oreochromis_niloticus
ENSETEG00000006022	CPSF1	53	96.429	ENSOANG00000010716	CPSF1	79	96.429	Ornithorhynchus_anatinus
ENSETEG00000006022	CPSF1	83	81.879	ENSORLG00000013544	cpsf1	81	81.879	Oryzias_latipes
ENSETEG00000006022	CPSF1	83	81.879	ENSORLG00020021693	cpsf1	81	81.879	Oryzias_latipes_hni
ENSETEG00000006022	CPSF1	83	81.879	ENSORLG00015009979	cpsf1	81	81.879	Oryzias_latipes_hsok
ENSETEG00000006022	CPSF1	83	82.550	ENSOMEG00000011849	cpsf1	81	82.550	Oryzias_melastigma
ENSETEG00000006022	CPSF1	83	98.658	ENSOGAG00000000315	CPSF1	80	98.658	Otolemur_garnettii
ENSETEG00000006022	CPSF1	83	97.315	ENSPPAG00000019280	CPSF1	83	97.315	Pan_paniscus
ENSETEG00000006022	CPSF1	83	97.315	ENSPTRG00000049288	-	80	97.315	Pan_troglodytes
ENSETEG00000006022	CPSF1	83	97.315	ENSPTRG00000051253	-	80	97.315	Pan_troglodytes
ENSETEG00000006022	CPSF1	79	97.315	ENSPANG00000015005	CPSF1	80	97.315	Papio_anubis
ENSETEG00000006022	CPSF1	83	87.248	ENSPKIG00000002582	cpsf1	81	87.248	Paramormyrops_kingsleyae
ENSETEG00000006022	CPSF1	83	97.315	ENSPCIG00000009035	CPSF1	80	97.315	Phascolarctos_cinereus
ENSETEG00000006022	CPSF1	83	81.208	ENSPFOG00000012870	cpsf1	81	81.208	Poecilia_formosa
ENSETEG00000006022	CPSF1	83	80.537	ENSPREG00000016307	cpsf1	81	80.537	Poecilia_reticulata
ENSETEG00000006022	CPSF1	82	93.960	ENSPPYG00000018973	CPSF1	80	93.960	Pongo_abelii
ENSETEG00000006022	CPSF1	79	91.275	ENSPCAG00000011541	CPSF1	79	91.275	Procavia_capensis
ENSETEG00000006022	CPSF1	83	88.154	ENSPCOG00000020001	CPSF1	80	88.154	Propithecus_coquereli
ENSETEG00000006022	CPSF1	79	98.658	ENSPVAG00000006761	CPSF1	77	98.658	Pteropus_vampyrus
ENSETEG00000006022	CPSF1	83	83.893	ENSPNYG00000004906	cpsf1	81	83.893	Pundamilia_nyererei
ENSETEG00000006022	CPSF1	83	68.658	ENSPNAG00000024395	cpsf1	80	68.658	Pygocentrus_nattereri
ENSETEG00000006022	CPSF1	83	97.987	ENSRNOG00000030705	Cpsf1	83	97.987	Rattus_norvegicus
ENSETEG00000006022	CPSF1	83	97.315	ENSRBIG00000044907	CPSF1	83	97.315	Rhinopithecus_bieti
ENSETEG00000006022	CPSF1	83	97.315	ENSRROG00000044861	CPSF1	83	97.315	Rhinopithecus_roxellana
ENSETEG00000006022	CPSF1	79	97.315	ENSSBOG00000027177	CPSF1	80	97.315	Saimiri_boliviensis_boliviensis
ENSETEG00000006022	CPSF1	83	97.987	ENSSHAG00000006500	CPSF1	80	97.987	Sarcophilus_harrisii
ENSETEG00000006022	CPSF1	83	87.248	ENSSFOG00015004606	cpsf1	80	87.248	Scleropages_formosus
ENSETEG00000006022	CPSF1	83	85.906	ENSSMAG00000020547	cpsf1	81	85.906	Scophthalmus_maximus
ENSETEG00000006022	CPSF1	83	85.235	ENSSDUG00000001100	cpsf1	80	85.235	Seriola_dumerili
ENSETEG00000006022	CPSF1	83	85.235	ENSSLDG00000003619	cpsf1	80	85.235	Seriola_lalandi_dorsalis
ENSETEG00000006022	CPSF1	75	97.987	ENSSARG00000003643	CPSF1	75	97.987	Sorex_araneus
ENSETEG00000006022	CPSF1	78	91.946	ENSSPUG00000014396	CPSF1	79	91.946	Sphenodon_punctatus
ENSETEG00000006022	CPSF1	83	85.906	ENSSPAG00000005349	cpsf1	81	85.906	Stegastes_partitus
ENSETEG00000006022	CPSF1	83	97.987	ENSSSCG00000005906	CPSF1	80	97.987	Sus_scrofa
ENSETEG00000006022	CPSF1	79	82.550	ENSTRUG00000013134	cpsf1	80	82.550	Takifugu_rubripes
ENSETEG00000006022	CPSF1	83	82.550	ENSTNIG00000014027	cpsf1	80	82.550	Tetraodon_nigroviridis
ENSETEG00000006022	CPSF1	65	84.589	ENSTBEG00000001756	CPSF1	74	84.589	Tupaia_belangeri
ENSETEG00000006022	CPSF1	72	98.658	ENSTTRG00000001937	CPSF1	70	98.658	Tursiops_truncatus
ENSETEG00000006022	CPSF1	79	98.658	ENSUAMG00000006476	CPSF1	78	98.658	Ursus_americanus
ENSETEG00000006022	CPSF1	83	81.208	ENSXCOG00000003608	cpsf1	80	81.208	Xiphophorus_couchianus
ENSETEG00000006022	CPSF1	83	81.208	ENSXMAG00000005798	cpsf1	80	81.208	Xiphophorus_maculatus