EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSETEG00000006221 (Gene tree)
Gene ID: -
Gene Symbol: SRSF6
Alias: B52|SFRS6|SRP55
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 2974 bases
Position: chrscaffold_300247:1244-4217
Accession: 10788
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000005046	RRM_1	PF00076.22	4.2e-31	1	2
ENSETEP00000005046	RRM_1	PF00076.22	4.2e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000006219	SRSF6-201	1032	-	ENSETEP00000005046	343 (aa)	-	UPI0000E40B6A

Gene Model

Click here to download ENSETEG00000006221's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000006221's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSETEG00000006221	SRSF6	51	60.227	ENSETEG00000020396	SRSF5	67	59.016

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000006221	SRSF6	94	90.154	ENSG00000124193	SRSF6	92	92.812	Homo_sapiens
ENSETEG00000006221	SRSF6	94	79.403	ENSAMEG00000003710	SRSF6	93	83.489	Ailuropoda_melanoleuca
ENSETEG00000006221	SRSF6	90	63.987	ENSACIG00000023658	-	56	86.034	Amphilophus_citrinellus
ENSETEG00000006221	SRSF6	100	61.671	ENSACIG00000020091	-	95	75.397	Amphilophus_citrinellus
ENSETEG00000006221	SRSF6	53	81.421	ENSAOCG00000004309	-	57	79.781	Amphiprion_ocellaris
ENSETEG00000006221	SRSF6	53	84.865	ENSAPEG00000013086	-	53	84.409	Amphiprion_percula
ENSETEG00000006221	SRSF6	69	69.038	ENSAPEG00000020746	-	66	77.660	Amphiprion_percula
ENSETEG00000006221	SRSF6	52	78.689	ENSATEG00000007255	-	71	77.297	Anabas_testudineus
ENSETEG00000006221	SRSF6	94	83.591	ENSACAG00000002061	SRSF6	91	83.699	Anolis_carolinensis
ENSETEG00000006221	SRSF6	94	89.538	ENSANAG00000024080	SRSF6	92	92.188	Aotus_nancymaae
ENSETEG00000006221	SRSF6	52	83.333	ENSAMXG00000003101	-	51	82.105	Astyanax_mexicanus
ENSETEG00000006221	SRSF6	53	80.108	ENSAMXG00000042692	-	96	78.358	Astyanax_mexicanus
ENSETEG00000006221	SRSF6	93	91.304	ENSBTAG00000008527	SRSF6	93	93.438	Bos_taurus
ENSETEG00000006221	SRSF6	54	91.979	ENSCJAG00000048403	SRSF6	69	94.652	Callithrix_jacchus
ENSETEG00000006221	SRSF6	94	91.049	ENSCAFG00000009289	SRSF6	93	93.438	Canis_familiaris
ENSETEG00000006221	SRSF6	94	91.049	ENSCAFG00020013559	SRSF6	93	93.438	Canis_lupus_dingo
ENSETEG00000006221	SRSF6	94	91.358	ENSCHIG00000015890	-	93	93.750	Capra_hircus
ENSETEG00000006221	SRSF6	94	90.741	ENSCHIG00000009148	-	93	93.125	Capra_hircus
ENSETEG00000006221	SRSF6	92	81.073	ENSTSYG00000026476	SRSF6	91	79.245	Carlito_syrichta
ENSETEG00000006221	SRSF6	94	73.765	ENSCPOG00000011761	SRSF6	58	94.872	Cavia_porcellus
ENSETEG00000006221	SRSF6	94	65.644	ENSCCAG00000018540	-	62	82.447	Cebus_capucinus
ENSETEG00000006221	SRSF6	94	89.846	ENSCCAG00000026018	-	92	92.500	Cebus_capucinus
ENSETEG00000006221	SRSF6	94	90.123	ENSCATG00000030794	SRSF6	93	92.500	Cercocebus_atys
ENSETEG00000006221	SRSF6	94	90.432	ENSCLAG00000010247	SRSF6	93	92.812	Chinchilla_lanigera
ENSETEG00000006221	SRSF6	94	90.123	ENSCSAG00000014022	SRSF6	93	92.500	Chlorocebus_sabaeus
ENSETEG00000006221	SRSF6	79	100.000	ENSCHOG00000000561	SRSF6	76	100.000	Choloepus_hoffmanni
ENSETEG00000006221	SRSF6	53	87.234	ENSCPBG00000018200	SRSF6	93	83.591	Chrysemys_picta_bellii
ENSETEG00000006221	SRSF6	94	79.503	ENSCANG00000042529	-	91	78.370	Colobus_angolensis_palliatus
ENSETEG00000006221	SRSF6	94	89.815	ENSCANG00000037774	-	93	92.188	Colobus_angolensis_palliatus
ENSETEG00000006221	SRSF6	94	89.506	ENSCGRG00001022339	Srsf6	94	91.875	Cricetulus_griseus_chok1gshd
ENSETEG00000006221	SRSF6	57	90.769	ENSCGRG00000006618	Srsf6	90	92.670	Cricetulus_griseus_crigri
ENSETEG00000006221	SRSF6	53	81.283	ENSDARG00000016783	srsf6b	82	85.897	Danio_rerio
ENSETEG00000006221	SRSF6	94	89.815	ENSDNOG00000008410	SRSF6	92	92.188	Dasypus_novemcinctus
ENSETEG00000006221	SRSF6	94	90.154	ENSDORG00000028378	Srsf6	93	92.812	Dipodomys_ordii
ENSETEG00000006221	SRSF6	94	90.123	ENSEASG00005023429	SRSF6	93	75.000	Equus_asinus_asinus
ENSETEG00000006221	SRSF6	94	90.123	ENSECAG00000023932	SRSF6	93	75.000	Equus_caballus
ENSETEG00000006221	SRSF6	57	91.795	ENSEEUG00000002324	SRSF6	88	92.746	Erinaceus_europaeus
ENSETEG00000006221	SRSF6	53	79.167	ENSELUG00000024182	SRSF6	90	76.423	Esox_lucius
ENSETEG00000006221	SRSF6	52	81.667	ENSELUG00000013506	SRSF6	70	83.333	Esox_lucius
ENSETEG00000006221	SRSF6	94	91.049	ENSFCAG00000032814	SRSF6	93	93.438	Felis_catus
ENSETEG00000006221	SRSF6	94	79.193	ENSFDAG00000012191	SRSF6	92	78.056	Fukomys_damarensis
ENSETEG00000006221	SRSF6	87	69.967	ENSFHEG00000023065	srsf6a	55	86.339	Fundulus_heteroclitus
ENSETEG00000006221	SRSF6	52	70.225	ENSGMOG00000006105	srsf6a	62	67.978	Gadus_morhua
ENSETEG00000006221	SRSF6	52	79.444	ENSGMOG00000014458	srsf6a	52	75.000	Gadus_morhua
ENSETEG00000006221	SRSF6	53	88.770	ENSGALG00000000990	SRSF6	93	80.675	Gallus_gallus
ENSETEG00000006221	SRSF6	87	57.988	ENSGACG00000006084	srsf6a	53	80.108	Gasterosteus_aculeatus
ENSETEG00000006221	SRSF6	53	87.234	ENSGAGG00000003238	SRSF6	93	83.591	Gopherus_agassizii
ENSETEG00000006221	SRSF6	94	90.154	ENSGGOG00000009808	SRSF6	92	92.812	Gorilla_gorilla
ENSETEG00000006221	SRSF6	63	70.044	ENSHBUG00000006386	-	58	80.328	Haplochromis_burtoni
ENSETEG00000006221	SRSF6	94	90.432	ENSHGLG00000007348	SRSF6	93	92.812	Heterocephalus_glaber_female
ENSETEG00000006221	SRSF6	90	73.955	ENSHGLG00000007701	-	58	70.430	Heterocephalus_glaber_female
ENSETEG00000006221	SRSF6	94	79.503	ENSHGLG00100005043	SRSF6	92	78.370	Heterocephalus_glaber_male
ENSETEG00000006221	SRSF6	83	64.360	ENSHCOG00000002740	srsf6a	57	80.328	Hippocampus_comes
ENSETEG00000006221	SRSF6	53	84.153	ENSIPUG00000004776	-	64	83.607	Ictalurus_punctatus
ENSETEG00000006221	SRSF6	94	89.846	ENSSTOG00000010866	SRSF6	93	92.500	Ictidomys_tridecemlineatus
ENSETEG00000006221	SRSF6	56	89.119	ENSJJAG00000020690	Srsf6	89	89.005	Jaculus_jaculus
ENSETEG00000006221	SRSF6	87	66.000	ENSKMAG00000011934	srsf6a	59	84.153	Kryptolebias_marmoratus
ENSETEG00000006221	SRSF6	52	81.522	ENSLBEG00000007356	srsf6a	52	81.720	Labrus_bergylta
ENSETEG00000006221	SRSF6	93	77.469	ENSLACG00000005466	SRSF6	54	86.957	Latimeria_chalumnae
ENSETEG00000006221	SRSF6	70	91.632	ENSLAFG00000006682	SRSF6	87	92.889	Loxodonta_africana
ENSETEG00000006221	SRSF6	94	90.123	ENSMFAG00000036925	SRSF6	93	92.500	Macaca_fascicularis
ENSETEG00000006221	SRSF6	94	90.123	ENSMMUG00000006742	SRSF6	93	92.500	Macaca_mulatta
ENSETEG00000006221	SRSF6	93	89.130	ENSMNEG00000038270	-	93	91.250	Macaca_nemestrina
ENSETEG00000006221	SRSF6	94	89.506	ENSMNEG00000027392	-	93	91.875	Macaca_nemestrina
ENSETEG00000006221	SRSF6	57	91.282	ENSMLEG00000031524	SRSF6	88	92.670	Mandrillus_leucophaeus
ENSETEG00000006221	SRSF6	53	84.324	ENSMAMG00000017161	srsf6a	53	83.871	Mastacembelus_armatus
ENSETEG00000006221	SRSF6	62	68.261	ENSMZEG00005008032	-	57	80.328	Maylandia_zebra
ENSETEG00000006221	SRSF6	52	81.111	ENSMZEG00005020658	-	60	80.556	Maylandia_zebra
ENSETEG00000006221	SRSF6	67	79.130	ENSMGAG00000000888	SRSF6	82	79.018	Meleagris_gallopavo
ENSETEG00000006221	SRSF6	94	90.154	ENSMICG00000008537	SRSF6	92	92.812	Microcebus_murinus
ENSETEG00000006221	SRSF6	57	90.769	ENSMOCG00000018738	Srsf6	90	92.670	Microtus_ochrogaster
ENSETEG00000006221	SRSF6	94	89.198	MGP_CAROLIEiJ_G0024606	Srsf6	94	91.562	Mus_caroli
ENSETEG00000006221	SRSF6	94	89.506	ENSMUSG00000016921	Srsf6	94	91.875	Mus_musculus
ENSETEG00000006221	SRSF6	94	89.506	MGP_PahariEiJ_G0026050	Srsf6	94	91.562	Mus_pahari
ENSETEG00000006221	SRSF6	94	89.506	MGP_SPRETEiJ_G0025528	Srsf6	94	91.875	Mus_spretus
ENSETEG00000006221	SRSF6	83	94.792	ENSMPUG00000017692	SRSF6	99	94.792	Mustela_putorius_furo
ENSETEG00000006221	SRSF6	93	75.504	ENSMLUG00000016618	SRSF6	93	75.652	Myotis_lucifugus
ENSETEG00000006221	SRSF6	94	88.580	ENSNGAG00000017560	Srsf6	94	90.312	Nannospalax_galili
ENSETEG00000006221	SRSF6	52	84.699	ENSNBRG00000001846	-	52	83.871	Neolamprologus_brichardi
ENSETEG00000006221	SRSF6	94	90.154	ENSNLEG00000006524	SRSF6	92	92.812	Nomascus_leucogenys
ENSETEG00000006221	SRSF6	53	88.172	ENSMEUG00000014615	SRSF6	62	90.957	Notamacropus_eugenii
ENSETEG00000006221	SRSF6	70	93.724	ENSOPRG00000002017	-	87	95.111	Ochotona_princeps
ENSETEG00000006221	SRSF6	87	67.667	ENSONIG00000020247	-	53	81.421	Oreochromis_niloticus
ENSETEG00000006221	SRSF6	66	52.423	ENSOCUG00000023999	-	70	60.674	Oryctolagus_cuniculus
ENSETEG00000006221	SRSF6	84	79.672	ENSOCUG00000009785	-	98	82.653	Oryctolagus_cuniculus
ENSETEG00000006221	SRSF6	94	90.154	ENSOGAG00000014468	SRSF6	92	92.812	Otolemur_garnettii
ENSETEG00000006221	SRSF6	93	90.654	ENSOARG00000003117	SRSF6	93	91.223	Ovis_aries
ENSETEG00000006221	SRSF6	90	80.645	ENSPPAG00000043131	-	100	81.935	Pan_paniscus
ENSETEG00000006221	SRSF6	94	89.846	ENSPPAG00000034327	-	92	92.500	Pan_paniscus
ENSETEG00000006221	SRSF6	94	91.049	ENSPPRG00000008917	SRSF6	93	93.438	Panthera_pardus
ENSETEG00000006221	SRSF6	57	93.846	ENSPTIG00000019153	SRSF6	88	95.288	Panthera_tigris_altaica
ENSETEG00000006221	SRSF6	94	90.462	ENSPTRG00000044686	-	92	93.125	Pan_troglodytes
ENSETEG00000006221	SRSF6	90	80.645	ENSPTRG00000046274	-	100	81.935	Pan_troglodytes
ENSETEG00000006221	SRSF6	94	90.123	ENSPANG00000035224	SRSF6	93	92.500	Papio_anubis
ENSETEG00000006221	SRSF6	51	73.596	ENSPKIG00000015703	-	97	61.832	Paramormyrops_kingsleyae
ENSETEG00000006221	SRSF6	100	65.330	ENSPKIG00000018463	-	77	87.179	Paramormyrops_kingsleyae
ENSETEG00000006221	SRSF6	89	68.301	ENSPMGG00000014963	srsf6a	55	84.783	Periophthalmus_magnuspinnatus
ENSETEG00000006221	SRSF6	53	86.207	ENSPFOG00000006437	srsf6a	50	81.053	Poecilia_formosa
ENSETEG00000006221	SRSF6	91	61.747	ENSPLAG00000009243	srsf6a	84	75.188	Poecilia_latipinna
ENSETEG00000006221	SRSF6	53	82.609	ENSPMEG00000006042	SRSF6	54	83.243	Poecilia_mexicana
ENSETEG00000006221	SRSF6	94	90.154	ENSPPYG00000011019	SRSF6	92	92.812	Pongo_abelii
ENSETEG00000006221	SRSF6	93	84.424	ENSPCAG00000010954	SRSF6	56	93.048	Procavia_capensis
ENSETEG00000006221	SRSF6	94	90.462	ENSPCOG00000026364	SRSF6	92	93.125	Propithecus_coquereli
ENSETEG00000006221	SRSF6	94	88.889	ENSPVAG00000015232	SRSF6	93	91.250	Pteropus_vampyrus
ENSETEG00000006221	SRSF6	52	84.699	ENSPNYG00000011272	-	51	83.871	Pundamilia_nyererei
ENSETEG00000006221	SRSF6	53	78.571	ENSPNYG00000004944	-	58	80.328	Pundamilia_nyererei
ENSETEG00000006221	SRSF6	94	89.506	ENSRNOG00000006380	Srsf6	94	91.875	Rattus_norvegicus
ENSETEG00000006221	SRSF6	93	90.654	ENSRBIG00000041414	SRSF6	93	92.476	Rhinopithecus_bieti
ENSETEG00000006221	SRSF6	94	90.432	ENSRROG00000029989	SRSF6	93	92.812	Rhinopithecus_roxellana
ENSETEG00000006221	SRSF6	93	66.250	ENSSBOG00000034078	-	54	72.778	Saimiri_boliviensis_boliviensis
ENSETEG00000006221	SRSF6	94	90.154	ENSSBOG00000033708	-	92	92.812	Saimiri_boliviensis_boliviensis
ENSETEG00000006221	SRSF6	93	59.669	ENSSFOG00015019681	-	53	79.793	Scleropages_formosus
ENSETEG00000006221	SRSF6	52	75.691	ENSSMAG00000017447	-	55	75.410	Scophthalmus_maximus
ENSETEG00000006221	SRSF6	87	66.561	ENSSDUG00000016097	srsf6a	53	83.871	Seriola_dumerili
ENSETEG00000006221	SRSF6	53	84.324	ENSSLDG00000022841	srsf6a	54	83.871	Seriola_lalandi_dorsalis
ENSETEG00000006221	SRSF6	69	92.017	ENSSARG00000001602	SRSF6	87	92.444	Sorex_araneus
ENSETEG00000006221	SRSF6	53	90.659	ENSSPUG00000004967	SRSF6	93	87.461	Sphenodon_punctatus
ENSETEG00000006221	SRSF6	75	68.045	ENSSPAG00000002362	srsf6a	67	82.011	Stegastes_partitus
ENSETEG00000006221	SRSF6	94	91.049	ENSSSCG00000007362	SRSF6	96	94.097	Sus_scrofa
ENSETEG00000006221	SRSF6	53	87.500	ENSTGUG00000003455	SRSF6	93	82.663	Taeniopygia_guttata
ENSETEG00000006221	SRSF6	87	68.977	ENSTNIG00000001692	srsf6a	57	82.258	Tetraodon_nigroviridis
ENSETEG00000006221	SRSF6	85	85.616	ENSTBEG00000013448	SRSF6	91	88.850	Tupaia_belangeri
ENSETEG00000006221	SRSF6	68	95.726	ENSTTRG00000015410	SRSF6	87	95.556	Tursiops_truncatus
ENSETEG00000006221	SRSF6	94	91.049	ENSUAMG00000003559	SRSF6	93	93.438	Ursus_americanus
ENSETEG00000006221	SRSF6	57	93.846	ENSUMAG00000001154	SRSF6	88	95.288	Ursus_maritimus
ENSETEG00000006221	SRSF6	76	100.000	ENSVPAG00000003016	SRSF6	73	100.000	Vicugna_pacos
ENSETEG00000006221	SRSF6	53	84.615	ENSXMAG00000021849	srsf6a	55	84.153	Xiphophorus_maculatus