EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSETEG00000006280 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 1882 bases
Position: chrGeneScaffold_4757:140222-142103
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000005093	CSD	PF00313.22	1.4e-51	1	4
ENSETEP00000005093	CSD	PF00313.22	1.4e-51	2	4
ENSETEP00000005093	CSD	PF00313.22	1.4e-51	3	4
ENSETEP00000005093	CSD	PF00313.22	1.4e-51	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000006279	-	1848	-	ENSETEP00000005093	616 (aa)	-	UPI0000E4240E

Gene Model

Click here to download ENSETEG00000006280's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000006280's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSETEG00000006280	-	91	94.074	ENSETEG00000002491	-	65	94.074
ENSETEG00000006280	-	99	72.625	ENSETEG00000013678	-	83	72.625
ENSETEG00000006280	-	74	66.231	ENSETEG00000007109	-	79	66.231

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000006280	-	100	87.342	ENSG00000009307	CSDE1	100	97.222	Homo_sapiens
ENSETEG00000006280	-	99	69.352	ENSAPOG00000015538	csde1	90	69.352	Acanthochromis_polyacanthus
ENSETEG00000006280	-	100	86.846	ENSAMEG00000017129	CSDE1	85	86.846	Ailuropoda_melanoleuca
ENSETEG00000006280	-	80	68.293	ENSACIG00000015175	csde1	100	68.293	Amphilophus_citrinellus
ENSETEG00000006280	-	99	69.510	ENSAOCG00000011510	csde1	90	69.510	Amphiprion_ocellaris
ENSETEG00000006280	-	99	69.510	ENSAPEG00000007194	csde1	90	69.510	Amphiprion_percula
ENSETEG00000006280	-	99	68.562	ENSATEG00000003864	csde1	90	68.562	Anabas_testudineus
ENSETEG00000006280	-	100	82.120	ENSAPLG00000008797	CSDE1	90	82.120	Anas_platyrhynchos
ENSETEG00000006280	-	100	78.130	ENSACAG00000003120	CSDE1	90	78.130	Anolis_carolinensis
ENSETEG00000006280	-	86	67.509	ENSANAG00000028396	-	85	67.509	Aotus_nancymaae
ENSETEG00000006280	-	100	87.342	ENSANAG00000024665	CSDE1	88	90.637	Aotus_nancymaae
ENSETEG00000006280	-	99	68.671	ENSACLG00000013296	csde1	90	68.671	Astatotilapia_calliptera
ENSETEG00000006280	-	99	69.085	ENSAMXG00000007436	csde1	90	69.085	Astyanax_mexicanus
ENSETEG00000006280	-	100	86.867	ENSBTAG00000000678	CSDE1	90	86.867	Bos_taurus
ENSETEG00000006280	-	100	87.342	ENSCJAG00000012565	CSDE1	85	87.342	Callithrix_jacchus
ENSETEG00000006280	-	100	87.184	ENSCAFG00000009618	CSDE1	87	87.184	Canis_familiaris
ENSETEG00000006280	-	100	87.184	ENSCAFG00020000481	CSDE1	90	87.184	Canis_lupus_dingo
ENSETEG00000006280	-	100	87.025	ENSCHIG00000017250	CSDE1	90	87.025	Capra_hircus
ENSETEG00000006280	-	100	87.342	ENSTSYG00000003747	CSDE1	90	87.342	Carlito_syrichta
ENSETEG00000006280	-	100	58.372	ENSCAPG00000015128	CSDE1	83	58.372	Cavia_aperea
ENSETEG00000006280	-	100	79.969	ENSCPOG00000040388	CSDE1	90	79.969	Cavia_porcellus
ENSETEG00000006280	-	97	67.559	ENSCCAG00000033677	-	99	67.559	Cebus_capucinus
ENSETEG00000006280	-	95	64.918	ENSCCAG00000030878	-	85	64.918	Cebus_capucinus
ENSETEG00000006280	-	100	87.342	ENSCCAG00000036794	CSDE1	98	83.333	Cebus_capucinus
ENSETEG00000006280	-	100	87.342	ENSCATG00000036962	CSDE1	87	87.342	Cercocebus_atys
ENSETEG00000006280	-	100	86.867	ENSCLAG00000006618	CSDE1	90	86.867	Chinchilla_lanigera
ENSETEG00000006280	-	100	83.258	ENSCSAG00000001658	CSDE1	86	83.258	Chlorocebus_sabaeus
ENSETEG00000006280	-	97	83.589	ENSCHOG00000000918	CSDE1	70	83.589	Choloepus_hoffmanni
ENSETEG00000006280	-	99	82.567	ENSCPBG00000016547	CSDE1	90	82.567	Chrysemys_picta_bellii
ENSETEG00000006280	-	97	37.519	ENSCING00000014465	-	89	37.519	Ciona_intestinalis
ENSETEG00000006280	-	98	37.323	ENSCSAVG00000008100	-	82	37.323	Ciona_savignyi
ENSETEG00000006280	-	100	87.342	ENSCANG00000035096	CSDE1	87	87.342	Colobus_angolensis_palliatus
ENSETEG00000006280	-	99	81.051	ENSCANG00000031069	-	94	88.848	Colobus_angolensis_palliatus
ENSETEG00000006280	-	100	73.786	ENSCGRG00001014011	-	82	73.786	Cricetulus_griseus_chok1gshd
ENSETEG00000006280	-	100	86.709	ENSCGRG00001016833	-	90	86.709	Cricetulus_griseus_chok1gshd
ENSETEG00000006280	-	100	81.739	ENSCGRG00000005831	-	88	81.739	Cricetulus_griseus_crigri
ENSETEG00000006280	-	96	80.892	ENSCGRG00000002225	-	83	80.892	Cricetulus_griseus_crigri
ENSETEG00000006280	-	100	69.085	ENSCSEG00000002620	csde1	90	69.085	Cynoglossus_semilaevis
ENSETEG00000006280	-	100	68.031	ENSCVAG00000001344	csde1	90	68.031	Cyprinodon_variegatus
ENSETEG00000006280	-	100	66.717	ENSDARG00000074758	csde1	100	66.931	Danio_rerio
ENSETEG00000006280	-	100	86.888	ENSDNOG00000010287	-	84	86.888	Dasypus_novemcinctus
ENSETEG00000006280	-	61	64.815	ENSDNOG00000034464	-	79	64.815	Dasypus_novemcinctus
ENSETEG00000006280	-	99	84.991	ENSDORG00000011609	Csde1	89	84.991	Dipodomys_ordii
ENSETEG00000006280	-	96	45.223	FBgn0263352	Unr	76	45.223	Drosophila_melanogaster
ENSETEG00000006280	-	99	49.034	ENSEBUG00000008647	csde1	91	47.210	Eptatretus_burgeri
ENSETEG00000006280	-	100	87.184	ENSEASG00005006284	CSDE1	86	87.184	Equus_asinus_asinus
ENSETEG00000006280	-	100	87.184	ENSECAG00000020885	CSDE1	90	84.945	Equus_caballus
ENSETEG00000006280	-	100	91.536	ENSEEUG00000006286	CSDE1	58	91.536	Erinaceus_europaeus
ENSETEG00000006280	-	99	68.082	ENSELUG00000015507	csde1	90	68.082	Esox_lucius
ENSETEG00000006280	-	100	87.500	ENSFCAG00000029266	CSDE1	90	87.500	Felis_catus
ENSETEG00000006280	-	100	78.281	ENSFALG00000003407	CSDE1	90	78.281	Ficedula_albicollis
ENSETEG00000006280	-	99	85.929	ENSFDAG00000007882	CSDE1	89	85.929	Fukomys_damarensis
ENSETEG00000006280	-	99	68.720	ENSFHEG00000010799	csde1	92	68.720	Fundulus_heteroclitus
ENSETEG00000006280	-	100	66.114	ENSGMOG00000012731	csde1	91	66.114	Gadus_morhua
ENSETEG00000006280	-	100	77.979	ENSGALG00000002139	CSDE1	91	77.979	Gallus_gallus
ENSETEG00000006280	-	100	68.976	ENSGAFG00000005241	csde1	92	68.976	Gambusia_affinis
ENSETEG00000006280	-	99	66.465	ENSGACG00000004544	csde1	91	66.465	Gasterosteus_aculeatus
ENSETEG00000006280	-	99	82.250	ENSGAGG00000017685	CSDE1	90	78.399	Gopherus_agassizii
ENSETEG00000006280	-	100	87.342	ENSGGOG00000002164	CSDE1	88	90.637	Gorilla_gorilla
ENSETEG00000006280	-	99	68.671	ENSHBUG00000020315	csde1	90	68.671	Haplochromis_burtoni
ENSETEG00000006280	-	95	78.662	ENSHGLG00000010039	-	86	78.662	Heterocephalus_glaber_female
ENSETEG00000006280	-	100	69.985	ENSHGLG00000019549	-	90	69.985	Heterocephalus_glaber_female
ENSETEG00000006280	-	100	66.819	ENSHGLG00000000650	-	80	66.819	Heterocephalus_glaber_female
ENSETEG00000006280	-	100	79.107	ENSHGLG00000003829	-	90	79.107	Heterocephalus_glaber_female
ENSETEG00000006280	-	99	80.300	ENSHGLG00000008555	-	97	80.300	Heterocephalus_glaber_female
ENSETEG00000006280	-	96	82.975	ENSHGLG00000009620	-	81	82.975	Heterocephalus_glaber_female
ENSETEG00000006280	-	100	76.442	ENSHGLG00000007471	-	90	76.442	Heterocephalus_glaber_female
ENSETEG00000006280	-	100	69.793	ENSHGLG00100001846	-	94	69.793	Heterocephalus_glaber_male
ENSETEG00000006280	-	96	67.834	ENSHGLG00100004833	-	68	67.834	Heterocephalus_glaber_male
ENSETEG00000006280	-	100	73.878	ENSHGLG00100007287	-	90	73.878	Heterocephalus_glaber_male
ENSETEG00000006280	-	100	74.525	ENSHGLG00100004195	-	97	74.525	Heterocephalus_glaber_male
ENSETEG00000006280	-	100	75.279	ENSHGLG00100012072	-	91	75.279	Heterocephalus_glaber_male
ENSETEG00000006280	-	100	72.079	ENSHGLG00100002245	-	81	72.079	Heterocephalus_glaber_male
ENSETEG00000006280	-	95	78.344	ENSHGLG00100006910	-	86	78.344	Heterocephalus_glaber_male
ENSETEG00000006280	-	100	87.184	ENSHGLG00100019438	-	90	87.184	Heterocephalus_glaber_male
ENSETEG00000006280	-	100	67.874	ENSHCOG00000004158	csde1	90	67.874	Hippocampus_comes
ENSETEG00000006280	-	99	68.927	ENSIPUG00000000355	csde1	90	68.927	Ictalurus_punctatus
ENSETEG00000006280	-	99	69.302	ENSSTOG00000030994	-	90	69.302	Ictidomys_tridecemlineatus
ENSETEG00000006280	-	100	66.451	ENSSTOG00000032722	-	94	66.451	Ictidomys_tridecemlineatus
ENSETEG00000006280	-	99	84.991	ENSJJAG00000019571	Csde1	89	84.991	Jaculus_jaculus
ENSETEG00000006280	-	99	65.616	ENSKMAG00000005685	csde1	91	65.224	Kryptolebias_marmoratus
ENSETEG00000006280	-	99	69.194	ENSLBEG00000014770	csde1	90	69.194	Labrus_bergylta
ENSETEG00000006280	-	99	69.184	ENSLACG00000018452	CSDE1	77	69.184	Latimeria_chalumnae
ENSETEG00000006280	-	100	68.429	ENSLOCG00000010413	csde1	85	68.533	Lepisosteus_oculatus
ENSETEG00000006280	-	100	86.076	ENSLAFG00000007150	CSDE1	86	86.076	Loxodonta_africana
ENSETEG00000006280	-	100	87.342	ENSMFAG00000003674	CSDE1	90	87.342	Macaca_fascicularis
ENSETEG00000006280	-	100	87.342	ENSMMUG00000001974	CSDE1	98	87.342	Macaca_mulatta
ENSETEG00000006280	-	100	87.342	ENSMNEG00000045247	CSDE1	87	87.342	Macaca_nemestrina
ENSETEG00000006280	-	100	87.342	ENSMLEG00000038673	CSDE1	85	87.342	Mandrillus_leucophaeus
ENSETEG00000006280	-	100	69.449	ENSMAMG00000008821	csde1	90	69.449	Mastacembelus_armatus
ENSETEG00000006280	-	99	68.671	ENSMZEG00005021675	csde1	90	68.671	Maylandia_zebra
ENSETEG00000006280	-	100	81.833	ENSMGAG00000016381	CSDE1	90	81.833	Meleagris_gallopavo
ENSETEG00000006280	-	99	85.553	ENSMAUG00000014031	Csde1	89	85.553	Mesocricetus_auratus
ENSETEG00000006280	-	100	86.867	ENSMICG00000002050	CSDE1	86	86.825	Microcebus_murinus
ENSETEG00000006280	-	100	86.709	ENSMOCG00000018960	Csde1	90	86.709	Microtus_ochrogaster
ENSETEG00000006280	-	99	69.352	ENSMMOG00000015075	csde1	90	69.352	Mola_mola
ENSETEG00000006280	-	100	84.543	ENSMODG00000004685	CSDE1	90	80.845	Monodelphis_domestica
ENSETEG00000006280	-	100	68.819	ENSMALG00000007132	csde1	90	68.819	Monopterus_albus
ENSETEG00000006280	-	100	86.551	MGP_CAROLIEiJ_G0025444	Csde1	100	92.715	Mus_caroli
ENSETEG00000006280	-	100	86.709	ENSMUSG00000068823	Csde1	100	92.715	Mus_musculus
ENSETEG00000006280	-	100	86.709	MGP_PahariEiJ_G0026888	Csde1	100	92.715	Mus_pahari
ENSETEG00000006280	-	100	86.709	MGP_SPRETEiJ_G0026394	Csde1	100	92.715	Mus_spretus
ENSETEG00000006280	-	100	83.409	ENSMPUG00000005753	CSDE1	92	83.409	Mustela_putorius_furo
ENSETEG00000006280	-	100	86.709	ENSMLUG00000005681	CSDE1	85	86.709	Myotis_lucifugus
ENSETEG00000006280	-	99	85.366	ENSNGAG00000021929	Csde1	89	85.366	Nannospalax_galili
ENSETEG00000006280	-	94	59.136	ENSNGAG00000012599	-	82	59.136	Nannospalax_galili
ENSETEG00000006280	-	99	68.671	ENSNBRG00000020808	csde1	90	68.671	Neolamprologus_brichardi
ENSETEG00000006280	-	100	87.500	ENSNLEG00000004842	CSDE1	88	91.011	Nomascus_leucogenys
ENSETEG00000006280	-	100	79.589	ENSMEUG00000002677	CSDE1	92	79.589	Notamacropus_eugenii
ENSETEG00000006280	-	100	78.125	ENSOPRG00000005002	CSDE1	75	78.125	Ochotona_princeps
ENSETEG00000006280	-	96	55.836	ENSODEG00000005979	-	68	55.836	Octodon_degus
ENSETEG00000006280	-	99	85.553	ENSODEG00000007383	-	89	85.553	Octodon_degus
ENSETEG00000006280	-	100	63.636	ENSONIG00000009309	csde1	91	63.636	Oreochromis_niloticus
ENSETEG00000006280	-	90	79.236	ENSOANG00000003346	-	76	79.236	Ornithorhynchus_anatinus
ENSETEG00000006280	-	100	87.025	ENSOCUG00000016438	CSDE1	85	87.025	Oryctolagus_cuniculus
ENSETEG00000006280	-	100	68.770	ENSORLG00000000707	csde1	90	68.770	Oryzias_latipes
ENSETEG00000006280	-	100	65.611	ENSORLG00020005148	csde1	91	63.783	Oryzias_latipes_hni
ENSETEG00000006280	-	100	68.770	ENSORLG00015019415	csde1	90	68.770	Oryzias_latipes_hsok
ENSETEG00000006280	-	99	69.352	ENSOMEG00000015656	csde1	90	69.352	Oryzias_melastigma
ENSETEG00000006280	-	100	87.500	ENSOGAG00000012127	CSDE1	85	87.500	Otolemur_garnettii
ENSETEG00000006280	-	100	87.025	ENSOARG00000020034	CSDE1	85	87.025	Ovis_aries
ENSETEG00000006280	-	100	87.342	ENSPPAG00000025861	CSDE1	88	90.637	Pan_paniscus
ENSETEG00000006280	-	100	87.500	ENSPPRG00000006747	CSDE1	85	87.500	Panthera_pardus
ENSETEG00000006280	-	100	87.500	ENSPTIG00000015468	CSDE1	90	83.409	Panthera_tigris_altaica
ENSETEG00000006280	-	100	87.342	ENSPTRG00000033721	CSDE1	88	90.637	Pan_troglodytes
ENSETEG00000006280	-	100	87.342	ENSPANG00000018873	CSDE1	90	87.342	Papio_anubis
ENSETEG00000006280	-	99	68.088	ENSPKIG00000009459	csde1	90	68.088	Paramormyrops_kingsleyae
ENSETEG00000006280	-	87	82.301	ENSPSIG00000003823	CSDE1	96	82.301	Pelodiscus_sinensis
ENSETEG00000006280	-	99	68.562	ENSPMGG00000000772	csde1	90	68.562	Periophthalmus_magnuspinnatus
ENSETEG00000006280	-	99	85.366	ENSPEMG00000020357	-	89	85.366	Peromyscus_maniculatus_bairdii
ENSETEG00000006280	-	100	80.845	ENSPCIG00000022587	CSDE1	90	80.845	Phascolarctos_cinereus
ENSETEG00000006280	-	99	67.170	ENSPFOG00000012664	csde1	88	65.878	Poecilia_formosa
ENSETEG00000006280	-	99	60.943	ENSPLAG00000017680	csde1	84	60.943	Poecilia_latipinna
ENSETEG00000006280	-	99	60.943	ENSPMEG00000005094	csde1	86	60.943	Poecilia_mexicana
ENSETEG00000006280	-	100	64.820	ENSPREG00000011631	csde1	91	62.500	Poecilia_reticulata
ENSETEG00000006280	-	100	83.107	ENSPPYG00000000996	CSDE1	90	83.107	Pongo_abelii
ENSETEG00000006280	-	100	82.437	ENSPCAG00000014368	CSDE1	85	82.437	Procavia_capensis
ENSETEG00000006280	-	63	72.848	ENSPCOG00000008223	-	98	72.848	Propithecus_coquereli
ENSETEG00000006280	-	100	87.342	ENSPCOG00000017893	CSDE1	97	81.171	Propithecus_coquereli
ENSETEG00000006280	-	100	86.709	ENSPVAG00000008225	CSDE1	85	86.709	Pteropus_vampyrus
ENSETEG00000006280	-	99	68.671	ENSPNYG00000013745	csde1	90	68.671	Pundamilia_nyererei
ENSETEG00000006280	-	99	70.032	ENSPNAG00000001958	csde1	90	70.032	Pygocentrus_nattereri
ENSETEG00000006280	-	100	82.655	ENSRNOG00000061058	Csde1	90	82.655	Rattus_norvegicus
ENSETEG00000006280	-	100	84.202	ENSRBIG00000038088	-	90	84.202	Rhinopithecus_bieti
ENSETEG00000006280	-	100	82.205	ENSRBIG00000038966	-	77	92.424	Rhinopithecus_bieti
ENSETEG00000006280	-	100	87.342	ENSRROG00000043101	CSDE1	87	87.342	Rhinopithecus_roxellana
ENSETEG00000006280	-	100	87.342	ENSSBOG00000035592	CSDE1	86	87.342	Saimiri_boliviensis_boliviensis
ENSETEG00000006280	-	100	84.652	ENSSHAG00000009831	CSDE1	90	84.652	Sarcophilus_harrisii
ENSETEG00000006280	-	100	68.504	ENSSFOG00015007498	csde1	90	68.504	Scleropages_formosus
ENSETEG00000006280	-	99	69.889	ENSSMAG00000007203	csde1	90	69.889	Scophthalmus_maximus
ENSETEG00000006280	-	100	68.976	ENSSDUG00000015380	csde1	90	68.976	Seriola_dumerili
ENSETEG00000006280	-	100	68.976	ENSSLDG00000008819	csde1	90	68.976	Seriola_lalandi_dorsalis
ENSETEG00000006280	-	100	88.057	ENSSARG00000000738	CSDE1	85	88.057	Sorex_araneus
ENSETEG00000006280	-	100	82.278	ENSSPUG00000008714	CSDE1	90	82.278	Sphenodon_punctatus
ENSETEG00000006280	-	99	69.510	ENSSPAG00000000716	csde1	90	69.510	Stegastes_partitus
ENSETEG00000006280	-	100	87.342	ENSSSCG00000006752	CSDE1	90	87.342	Sus_scrofa
ENSETEG00000006280	-	100	77.143	ENSTGUG00000000972	CSDE1	90	77.143	Taeniopygia_guttata
ENSETEG00000006280	-	99	66.297	ENSTRUG00000007996	csde1	90	66.297	Takifugu_rubripes
ENSETEG00000006280	-	86	69.732	ENSTNIG00000010878	csde1	100	69.732	Tetraodon_nigroviridis
ENSETEG00000006280	-	100	86.392	ENSTTRG00000015583	CSDE1	85	86.392	Tursiops_truncatus
ENSETEG00000006280	-	99	83.042	ENSUAMG00000024289	-	91	83.042	Ursus_americanus
ENSETEG00000006280	-	86	90.645	ENSUAMG00000021779	-	99	90.645	Ursus_americanus
ENSETEG00000006280	-	83	81.818	ENSUMAG00000011714	-	81	81.818	Ursus_maritimus
ENSETEG00000006280	-	100	82.120	ENSUMAG00000009720	-	89	82.120	Ursus_maritimus
ENSETEG00000006280	-	99	89.953	ENSVPAG00000000749	CSDE1	62	89.953	Vicugna_pacos
ENSETEG00000006280	-	100	83.107	ENSVVUG00000009890	CSDE1	91	83.107	Vulpes_vulpes
ENSETEG00000006280	-	100	73.273	ENSXETG00000021448	csde1	91	73.273	Xenopus_tropicalis
ENSETEG00000006280	-	87	74.292	ENSXCOG00000000035	csde1	76	74.292	Xiphophorus_couchianus
ENSETEG00000006280	-	99	68.878	ENSXMAG00000009080	csde1	91	68.878	Xiphophorus_maculatus