EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000006538 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 10854 bases
Position: chrGeneScaffold_3664:56374-67227
Accession: 101652699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000005311	PseudoU_synth_2	PF00849.22	3.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000006537	RPUSD3-201	1059	XM_004702442	ENSETEP00000005311	353 (aa)	XP_004702499	UPI0000E4150F

Gene Model

Click here to download ENSETEG00000006538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000006538's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000006538	RPUSD3	99	73.011	ENSG00000156990	RPUSD3	100	73.011	Homo_sapiens
ENSETEG00000006538	RPUSD3	99	73.580	ENSAMEG00000016227	RPUSD3	100	73.580	Ailuropoda_melanoleuca
ENSETEG00000006538	RPUSD3	79	50.000	ENSACAG00000009836	RPUSD3	79	50.000	Anolis_carolinensis
ENSETEG00000006538	RPUSD3	53	74.468	ENSANAG00000019945	-	75	74.468	Aotus_nancymaae
ENSETEG00000006538	RPUSD3	78	51.712	ENSANAG00000007127	-	98	51.712	Aotus_nancymaae
ENSETEG00000006538	RPUSD3	53	70.588	ENSANAG00000038118	-	89	70.588	Aotus_nancymaae
ENSETEG00000006538	RPUSD3	97	70.058	ENSBTAG00000007968	RPUSD3	100	70.058	Bos_taurus
ENSETEG00000006538	RPUSD3	99	73.295	ENSCAFG00000029733	RPUSD3	100	73.295	Canis_familiaris
ENSETEG00000006538	RPUSD3	99	73.295	ENSCAFG00020008582	RPUSD3	100	73.295	Canis_lupus_dingo
ENSETEG00000006538	RPUSD3	97	70.058	ENSCHIG00000026027	RPUSD3	100	70.058	Capra_hircus
ENSETEG00000006538	RPUSD3	98	68.786	ENSTSYG00000009994	RPUSD3	99	69.540	Carlito_syrichta
ENSETEG00000006538	RPUSD3	75	75.665	ENSCAPG00000017559	RPUSD3	99	75.665	Cavia_aperea
ENSETEG00000006538	RPUSD3	75	75.564	ENSCPOG00000037956	RPUSD3	90	64.412	Cavia_porcellus
ENSETEG00000006538	RPUSD3	99	72.034	ENSCCAG00000029530	RPUSD3	100	72.034	Cebus_capucinus
ENSETEG00000006538	RPUSD3	99	71.307	ENSCATG00000036939	RPUSD3	100	71.307	Cercocebus_atys
ENSETEG00000006538	RPUSD3	99	71.875	ENSCSAG00000010506	RPUSD3	100	71.875	Chlorocebus_sabaeus
ENSETEG00000006538	RPUSD3	50	74.603	ENSCHOG00000010151	-	67	74.603	Choloepus_hoffmanni
ENSETEG00000006538	RPUSD3	71	52.800	ENSCPBG00000008825	RPUSD3	93	54.183	Chrysemys_picta_bellii
ENSETEG00000006538	RPUSD3	99	71.591	ENSCANG00000040711	RPUSD3	100	71.591	Colobus_angolensis_palliatus
ENSETEG00000006538	RPUSD3	99	67.429	ENSCGRG00001004923	Rpusd3	97	67.429	Cricetulus_griseus_chok1gshd
ENSETEG00000006538	RPUSD3	96	68.437	ENSCGRG00000018315	Rpusd3	99	68.437	Cricetulus_griseus_crigri
ENSETEG00000006538	RPUSD3	100	70.538	ENSDNOG00000039160	RPUSD3	93	70.538	Dasypus_novemcinctus
ENSETEG00000006538	RPUSD3	74	70.896	ENSDORG00000026827	Rpusd3	92	70.896	Dipodomys_ordii
ENSETEG00000006538	RPUSD3	54	37.629	ENSEBUG00000015605	RPUSD3	63	37.629	Eptatretus_burgeri
ENSETEG00000006538	RPUSD3	99	74.716	ENSEASG00005014160	RPUSD3	98	74.716	Equus_asinus_asinus
ENSETEG00000006538	RPUSD3	99	73.580	ENSECAG00000019988	RPUSD3	98	73.580	Equus_caballus
ENSETEG00000006538	RPUSD3	95	56.433	ENSEEUG00000007353	RPUSD3	95	56.305	Erinaceus_europaeus
ENSETEG00000006538	RPUSD3	99	73.011	ENSFCAG00000014199	RPUSD3	100	73.011	Felis_catus
ENSETEG00000006538	RPUSD3	77	47.059	ENSFALG00000012968	RPUSD3	99	47.059	Ficedula_albicollis
ENSETEG00000006538	RPUSD3	74	75.191	ENSFDAG00000008350	RPUSD3	81	75.191	Fukomys_damarensis
ENSETEG00000006538	RPUSD3	74	53.992	ENSGAGG00000007493	RPUSD3	82	55.303	Gopherus_agassizii
ENSETEG00000006538	RPUSD3	99	72.727	ENSGGOG00000013120	RPUSD3	100	72.727	Gorilla_gorilla
ENSETEG00000006538	RPUSD3	78	74.909	ENSHGLG00000011722	RPUSD3	71	74.909	Heterocephalus_glaber_female
ENSETEG00000006538	RPUSD3	78	74.909	ENSHGLG00100016038	RPUSD3	71	74.909	Heterocephalus_glaber_male
ENSETEG00000006538	RPUSD3	99	70.170	ENSSTOG00000002125	RPUSD3	100	70.170	Ictidomys_tridecemlineatus
ENSETEG00000006538	RPUSD3	96	64.307	ENSJJAG00000012679	Rpusd3	99	64.307	Jaculus_jaculus
ENSETEG00000006538	RPUSD3	97	77.326	ENSLAFG00000017501	RPUSD3	100	77.326	Loxodonta_africana
ENSETEG00000006538	RPUSD3	99	71.023	ENSMFAG00000032407	RPUSD3	100	71.023	Macaca_fascicularis
ENSETEG00000006538	RPUSD3	99	68.182	ENSMMUG00000010628	RPUSD3	97	75.321	Macaca_mulatta
ENSETEG00000006538	RPUSD3	99	71.307	ENSMNEG00000040308	RPUSD3	100	71.307	Macaca_nemestrina
ENSETEG00000006538	RPUSD3	99	71.307	ENSMLEG00000033940	RPUSD3	100	71.307	Mandrillus_leucophaeus
ENSETEG00000006538	RPUSD3	96	67.847	ENSMAUG00000015473	Rpusd3	99	67.847	Mesocricetus_auratus
ENSETEG00000006538	RPUSD3	97	71.512	ENSMICG00000002315	RPUSD3	100	71.512	Microcebus_murinus
ENSETEG00000006538	RPUSD3	96	66.667	ENSMOCG00000022613	Rpusd3	99	66.667	Microtus_ochrogaster
ENSETEG00000006538	RPUSD3	95	54.030	ENSMODG00000005210	RPUSD3	92	52.149	Monodelphis_domestica
ENSETEG00000006538	RPUSD3	95	67.761	MGP_CAROLIEiJ_G0028725	Rpusd3	97	67.761	Mus_caroli
ENSETEG00000006538	RPUSD3	95	68.358	ENSMUSG00000051169	Rpusd3	97	68.358	Mus_musculus
ENSETEG00000006538	RPUSD3	95	68.657	MGP_PahariEiJ_G0022476	Rpusd3	97	68.657	Mus_pahari
ENSETEG00000006538	RPUSD3	95	68.060	MGP_SPRETEiJ_G0029753	Rpusd3	97	68.060	Mus_spretus
ENSETEG00000006538	RPUSD3	99	71.591	ENSMPUG00000017132	RPUSD3	100	71.591	Mustela_putorius_furo
ENSETEG00000006538	RPUSD3	99	73.851	ENSMLUG00000006135	RPUSD3	100	73.851	Myotis_lucifugus
ENSETEG00000006538	RPUSD3	95	68.358	ENSNGAG00000023704	Rpusd3	98	68.358	Nannospalax_galili
ENSETEG00000006538	RPUSD3	99	61.080	ENSNLEG00000004214	RPUSD3	95	73.762	Nomascus_leucogenys
ENSETEG00000006538	RPUSD3	74	59.770	ENSMEUG00000013098	-	100	59.924	Notamacropus_eugenii
ENSETEG00000006538	RPUSD3	99	57.593	ENSOPRG00000002300	RPUSD3	99	57.593	Ochotona_princeps
ENSETEG00000006538	RPUSD3	75	75.000	ENSODEG00000018137	RPUSD3	91	75.000	Octodon_degus
ENSETEG00000006538	RPUSD3	81	46.667	ENSOANG00000012081	-	99	46.667	Ornithorhynchus_anatinus
ENSETEG00000006538	RPUSD3	97	61.517	ENSOCUG00000027885	RPUSD3	100	61.932	Oryctolagus_cuniculus
ENSETEG00000006538	RPUSD3	89	72.930	ENSOGAG00000012592	RPUSD3	100	72.930	Otolemur_garnettii
ENSETEG00000006538	RPUSD3	99	70.940	ENSOARG00000005928	RPUSD3	99	70.940	Ovis_aries
ENSETEG00000006538	RPUSD3	99	73.352	ENSPPAG00000038083	RPUSD3	99	73.352	Pan_paniscus
ENSETEG00000006538	RPUSD3	99	73.295	ENSPPRG00000024433	RPUSD3	100	73.295	Panthera_pardus
ENSETEG00000006538	RPUSD3	97	75.000	ENSPTIG00000006828	RPUSD3	100	75.000	Panthera_tigris_altaica
ENSETEG00000006538	RPUSD3	99	73.352	ENSPTRG00000051760	RPUSD3	99	73.352	Pan_troglodytes
ENSETEG00000006538	RPUSD3	99	71.591	ENSPANG00000023885	RPUSD3	100	71.591	Papio_anubis
ENSETEG00000006538	RPUSD3	96	69.027	ENSPEMG00000017245	Rpusd3	99	69.027	Peromyscus_maniculatus_bairdii
ENSETEG00000006538	RPUSD3	82	60.208	ENSPCIG00000021901	RPUSD3	85	59.727	Phascolarctos_cinereus
ENSETEG00000006538	RPUSD3	99	73.066	ENSPPYG00000013676	RPUSD3	99	73.066	Pongo_abelii
ENSETEG00000006538	RPUSD3	82	60.900	ENSPCAG00000013731	-	100	60.900	Procavia_capensis
ENSETEG00000006538	RPUSD3	99	73.580	ENSPCOG00000018314	RPUSD3	100	73.580	Propithecus_coquereli
ENSETEG00000006538	RPUSD3	99	72.159	ENSPVAG00000011107	RPUSD3	100	72.159	Pteropus_vampyrus
ENSETEG00000006538	RPUSD3	95	65.075	ENSRNOG00000009084	Rpusd3	97	65.075	Rattus_norvegicus
ENSETEG00000006538	RPUSD3	99	72.779	ENSRBIG00000041230	RPUSD3	99	72.571	Rhinopithecus_bieti
ENSETEG00000006538	RPUSD3	99	72.493	ENSRROG00000043328	RPUSD3	99	72.286	Rhinopithecus_roxellana
ENSETEG00000006538	RPUSD3	99	70.904	ENSSBOG00000036106	RPUSD3	100	70.904	Saimiri_boliviensis_boliviensis
ENSETEG00000006538	RPUSD3	82	54.671	ENSSHAG00000015536	RPUSD3	93	56.055	Sarcophilus_harrisii
ENSETEG00000006538	RPUSD3	99	71.875	ENSSSCG00000011555	RPUSD3	100	71.875	Sus_scrofa
ENSETEG00000006538	RPUSD3	66	50.215	ENSTGUG00000008744	RPUSD3	93	49.770	Taeniopygia_guttata
ENSETEG00000006538	RPUSD3	81	70.877	ENSTBEG00000000176	RPUSD3	99	70.877	Tupaia_belangeri
ENSETEG00000006538	RPUSD3	99	71.875	ENSTTRG00000007544	RPUSD3	100	71.875	Tursiops_truncatus
ENSETEG00000006538	RPUSD3	89	75.478	ENSUAMG00000011354	RPUSD3	98	75.478	Ursus_americanus
ENSETEG00000006538	RPUSD3	99	73.580	ENSUMAG00000018830	RPUSD3	100	73.580	Ursus_maritimus
ENSETEG00000006538	RPUSD3	97	74.419	ENSVVUG00000023735	RPUSD3	100	74.419	Vulpes_vulpes
ENSETEG00000006538	RPUSD3	79	44.840	ENSXETG00000023546	rpusd3	99	44.840	Xenopus_tropicalis