EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000007587 (Gene tree)
Gene ID: -
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 93042 bases
Position: chrGeneScaffold_2239:2394-95435
Accession: 21185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000006165	CAF1	PF04857.20	2.6e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000007587	PNLDC1-201	1488	-	ENSETEP00000006165	496 (aa)	-	UPI0000E4344E

Gene Model

Click here to download ENSETEG00000007587's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000007587's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000007587	PNLDC1	98	76.543	ENSG00000146453	PNLDC1	93	76.543	Homo_sapiens
ENSETEG00000007587	PNLDC1	99	78.119	ENSAMEG00000015371	PNLDC1	92	78.119	Ailuropoda_melanoleuca
ENSETEG00000007587	PNLDC1	98	53.862	ENSAPLG00000007014	PNLDC1	93	53.862	Anas_platyrhynchos
ENSETEG00000007587	PNLDC1	99	54.747	ENSACAG00000013667	PNLDC1	93	54.747	Anolis_carolinensis
ENSETEG00000007587	PNLDC1	99	74.291	ENSANAG00000034713	PNLDC1	97	74.291	Aotus_nancymaae
ENSETEG00000007587	PNLDC1	98	77.823	ENSBTAG00000015166	PNLDC1	92	77.710	Bos_taurus
ENSETEG00000007587	PNLDC1	99	73.887	ENSCJAG00000011865	PNLDC1	96	74.691	Callithrix_jacchus
ENSETEG00000007587	PNLDC1	99	77.530	ENSCAFG00000000740	PNLDC1	93	77.530	Canis_familiaris
ENSETEG00000007587	PNLDC1	99	75.152	ENSCAFG00020017742	PNLDC1	93	75.152	Canis_lupus_dingo
ENSETEG00000007587	PNLDC1	99	74.949	ENSCHIG00000003141	PNLDC1	93	74.949	Capra_hircus
ENSETEG00000007587	PNLDC1	99	75.101	ENSTSYG00000005606	PNLDC1	93	75.101	Carlito_syrichta
ENSETEG00000007587	PNLDC1	98	56.707	ENSCAPG00000011893	PNLDC1	95	56.707	Cavia_aperea
ENSETEG00000007587	PNLDC1	98	72.840	ENSCPOG00000019565	PNLDC1	91	72.840	Cavia_porcellus
ENSETEG00000007587	PNLDC1	99	74.494	ENSCCAG00000026232	PNLDC1	93	74.494	Cebus_capucinus
ENSETEG00000007587	PNLDC1	99	74.291	ENSCATG00000033196	PNLDC1	93	74.291	Cercocebus_atys
ENSETEG00000007587	PNLDC1	99	72.819	ENSCLAG00000003228	PNLDC1	93	72.819	Chinchilla_lanigera
ENSETEG00000007587	PNLDC1	99	75.356	ENSCSAG00000012478	PNLDC1	94	75.356	Chlorocebus_sabaeus
ENSETEG00000007587	PNLDC1	98	60.288	ENSCPBG00000004050	PNLDC1	95	60.288	Chrysemys_picta_bellii
ENSETEG00000007587	PNLDC1	68	35.897	ENSCING00000010142	-	69	35.897	Ciona_intestinalis
ENSETEG00000007587	PNLDC1	98	75.154	ENSCANG00000043076	PNLDC1	94	75.154	Colobus_angolensis_palliatus
ENSETEG00000007587	PNLDC1	99	71.862	ENSCGRG00001007470	-	93	71.862	Cricetulus_griseus_chok1gshd
ENSETEG00000007587	PNLDC1	99	56.740	ENSCGRG00001011981	-	91	56.740	Cricetulus_griseus_chok1gshd
ENSETEG00000007587	PNLDC1	99	59.155	ENSCGRG00000003103	-	91	59.155	Cricetulus_griseus_crigri
ENSETEG00000007587	PNLDC1	99	71.862	ENSCGRG00000010221	-	93	71.862	Cricetulus_griseus_crigri
ENSETEG00000007587	PNLDC1	99	76.768	ENSDNOG00000013709	PNLDC1	93	76.768	Dasypus_novemcinctus
ENSETEG00000007587	PNLDC1	98	74.438	ENSDORG00000011517	Pnldc1	91	74.438	Dipodomys_ordii
ENSETEG00000007587	PNLDC1	99	66.474	ENSEASG00005019029	PNLDC1	93	66.474	Equus_asinus_asinus
ENSETEG00000007587	PNLDC1	99	76.518	ENSECAG00000012898	PNLDC1	93	76.518	Equus_caballus
ENSETEG00000007587	PNLDC1	72	78.125	ENSEEUG00000005717	-	86	78.125	Erinaceus_europaeus
ENSETEG00000007587	PNLDC1	99	76.721	ENSFCAG00000002848	PNLDC1	93	76.721	Felis_catus
ENSETEG00000007587	PNLDC1	97	52.469	ENSFALG00000012081	PNLDC1	96	52.469	Ficedula_albicollis
ENSETEG00000007587	PNLDC1	99	73.022	ENSFDAG00000021334	PNLDC1	93	73.022	Fukomys_damarensis
ENSETEG00000007587	PNLDC1	81	50.617	ENSGALG00000011624	PNLDC1	79	50.617	Gallus_gallus
ENSETEG00000007587	PNLDC1	98	60.700	ENSGAGG00000015276	PNLDC1	99	60.663	Gopherus_agassizii
ENSETEG00000007587	PNLDC1	99	75.304	ENSGGOG00000014077	PNLDC1	93	75.304	Gorilla_gorilla
ENSETEG00000007587	PNLDC1	99	73.428	ENSHGLG00000006889	PNLDC1	93	73.428	Heterocephalus_glaber_female
ENSETEG00000007587	PNLDC1	99	73.428	ENSHGLG00100018275	PNLDC1	93	73.428	Heterocephalus_glaber_male
ENSETEG00000007587	PNLDC1	99	76.113	ENSSTOG00000005595	PNLDC1	93	76.113	Ictidomys_tridecemlineatus
ENSETEG00000007587	PNLDC1	99	73.077	ENSJJAG00000009937	Pnldc1	93	73.077	Jaculus_jaculus
ENSETEG00000007587	PNLDC1	53	85.551	ENSLAFG00000030189	PNLDC1	79	84.328	Loxodonta_africana
ENSETEG00000007587	PNLDC1	99	74.899	ENSMFAG00000041296	PNLDC1	93	74.899	Macaca_fascicularis
ENSETEG00000007587	PNLDC1	99	74.899	ENSMMUG00000004181	PNLDC1	94	74.648	Macaca_mulatta
ENSETEG00000007587	PNLDC1	99	74.899	ENSMNEG00000034271	PNLDC1	93	74.899	Macaca_nemestrina
ENSETEG00000007587	PNLDC1	99	71.053	ENSMLEG00000044059	PNLDC1	93	71.053	Mandrillus_leucophaeus
ENSETEG00000007587	PNLDC1	98	52.049	ENSMGAG00000012470	PNLDC1	93	52.049	Meleagris_gallopavo
ENSETEG00000007587	PNLDC1	99	58.847	ENSMAUG00000012298	Pnldc1	93	58.847	Mesocricetus_auratus
ENSETEG00000007587	PNLDC1	99	74.899	ENSMICG00000008021	PNLDC1	93	74.899	Microcebus_murinus
ENSETEG00000007587	PNLDC1	99	74.798	ENSMOCG00000014287	Pnldc1	93	74.798	Microtus_ochrogaster
ENSETEG00000007587	PNLDC1	98	69.278	ENSMODG00000007420	PNLDC1	91	69.278	Monodelphis_domestica
ENSETEG00000007587	PNLDC1	99	76.113	MGP_CAROLIEiJ_G0021045	Pnldc1	93	76.113	Mus_caroli
ENSETEG00000007587	PNLDC1	99	76.113	ENSMUSG00000073460	Pnldc1	94	81.224	Mus_musculus
ENSETEG00000007587	PNLDC1	99	76.518	MGP_PahariEiJ_G0023361	Pnldc1	93	76.518	Mus_pahari
ENSETEG00000007587	PNLDC1	99	75.911	MGP_SPRETEiJ_G0021975	Pnldc1	93	75.911	Mus_spretus
ENSETEG00000007587	PNLDC1	99	77.733	ENSMPUG00000004920	PNLDC1	93	77.733	Mustela_putorius_furo
ENSETEG00000007587	PNLDC1	99	76.316	ENSMLUG00000000747	PNLDC1	93	76.316	Myotis_lucifugus
ENSETEG00000007587	PNLDC1	99	75.709	ENSNGAG00000017714	Pnldc1	93	75.709	Nannospalax_galili
ENSETEG00000007587	PNLDC1	99	75.460	ENSNLEG00000011282	PNLDC1	94	75.460	Nomascus_leucogenys
ENSETEG00000007587	PNLDC1	58	55.556	ENSMEUG00000014042	-	100	55.556	Notamacropus_eugenii
ENSETEG00000007587	PNLDC1	65	55.000	ENSMEUG00000011926	-	64	55.000	Notamacropus_eugenii
ENSETEG00000007587	PNLDC1	72	70.787	ENSOPRG00000003813	PNLDC1	67	70.787	Ochotona_princeps
ENSETEG00000007587	PNLDC1	99	72.211	ENSODEG00000008047	PNLDC1	93	72.211	Octodon_degus
ENSETEG00000007587	PNLDC1	97	53.416	ENSOANG00000012199	PNLDC1	91	54.433	Ornithorhynchus_anatinus
ENSETEG00000007587	PNLDC1	99	73.887	ENSOCUG00000013867	PNLDC1	93	73.887	Oryctolagus_cuniculus
ENSETEG00000007587	PNLDC1	99	76.316	ENSOGAG00000007331	PNLDC1	93	76.316	Otolemur_garnettii
ENSETEG00000007587	PNLDC1	99	74.899	ENSOARG00000004585	PNLDC1	93	74.899	Ovis_aries
ENSETEG00000007587	PNLDC1	99	75.506	ENSPPAG00000026651	PNLDC1	93	75.506	Pan_paniscus
ENSETEG00000007587	PNLDC1	99	76.721	ENSPPRG00000012854	PNLDC1	93	76.721	Panthera_pardus
ENSETEG00000007587	PNLDC1	98	75.207	ENSPTIG00000011501	PNLDC1	91	75.207	Panthera_tigris_altaica
ENSETEG00000007587	PNLDC1	98	76.543	ENSPTRG00000018762	PNLDC1	93	76.543	Pan_troglodytes
ENSETEG00000007587	PNLDC1	99	74.899	ENSPANG00000022009	PNLDC1	93	74.899	Papio_anubis
ENSETEG00000007587	PNLDC1	52	63.424	ENSPSIG00000011419	PNLDC1	85	63.424	Pelodiscus_sinensis
ENSETEG00000007587	PNLDC1	99	76.721	ENSPEMG00000016301	Pnldc1	93	76.721	Peromyscus_maniculatus_bairdii
ENSETEG00000007587	PNLDC1	88	68.950	ENSPCIG00000023412	PNLDC1	99	68.950	Phascolarctos_cinereus
ENSETEG00000007587	PNLDC1	99	69.495	ENSPPYG00000017148	PNLDC1	93	69.495	Pongo_abelii
ENSETEG00000007587	PNLDC1	99	69.231	ENSPCAG00000014169	PNLDC1	93	69.231	Procavia_capensis
ENSETEG00000007587	PNLDC1	99	74.696	ENSPCOG00000025722	PNLDC1	93	74.696	Propithecus_coquereli
ENSETEG00000007587	PNLDC1	74	76.423	ENSPVAG00000005325	PNLDC1	70	76.423	Pteropus_vampyrus
ENSETEG00000007587	PNLDC1	99	76.113	ENSRNOG00000023140	Pnldc1	95	79.605	Rattus_norvegicus
ENSETEG00000007587	PNLDC1	99	74.494	ENSRBIG00000033806	PNLDC1	93	74.494	Rhinopithecus_bieti
ENSETEG00000007587	PNLDC1	98	75.565	ENSRROG00000043919	PNLDC1	94	75.565	Rhinopithecus_roxellana
ENSETEG00000007587	PNLDC1	99	75.101	ENSSBOG00000019135	PNLDC1	93	75.101	Saimiri_boliviensis_boliviensis
ENSETEG00000007587	PNLDC1	98	68.994	ENSSHAG00000015192	PNLDC1	93	68.994	Sarcophilus_harrisii
ENSETEG00000007587	PNLDC1	52	64.981	ENSSPUG00000004627	PNLDC1	99	56.250	Sphenodon_punctatus
ENSETEG00000007587	PNLDC1	99	76.892	ENSSSCG00000004046	PNLDC1	95	76.892	Sus_scrofa
ENSETEG00000007587	PNLDC1	94	52.778	ENSTGUG00000011418	PNLDC1	96	52.778	Taeniopygia_guttata
ENSETEG00000007587	PNLDC1	99	66.871	ENSTBEG00000009131	PNLDC1	94	66.871	Tupaia_belangeri
ENSETEG00000007587	PNLDC1	75	71.081	ENSTTRG00000010409	PNLDC1	70	71.081	Tursiops_truncatus
ENSETEG00000007587	PNLDC1	99	63.817	ENSUAMG00000015783	PNLDC1	93	63.817	Ursus_americanus
ENSETEG00000007587	PNLDC1	98	70.588	ENSUMAG00000011903	PNLDC1	96	70.588	Ursus_maritimus
ENSETEG00000007587	PNLDC1	99	77.530	ENSVVUG00000006586	PNLDC1	95	78.326	Vulpes_vulpes
ENSETEG00000007587	PNLDC1	54	30.201	ENSXETG00000010994	parn	55	30.201	Xenopus_tropicalis