EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSETEG00000007762 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 3175 bases
Position: chrscaffold_198826:2801-5975
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000006306	LSM	PF01423.22	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000007760	-	375	-	ENSETEP00000006306	124 (aa)	-	UPI0000E40CF4

Gene Model

Click here to download ENSETEG00000007762's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000007762's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSETEG00000007762	-	100	97.581	ENSETEG00000003110	-	100	97.581

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000007762	-	100	98.387	ENSG00000130520	LSM4	99	98.387	Homo_sapiens
ENSETEG00000007762	-	100	98.387	ENSAMEG00000011162	LSM4	85	98.387	Ailuropoda_melanoleuca
ENSETEG00000007762	-	100	98.387	ENSANAG00000034659	LSM4	99	98.387	Aotus_nancymaae
ENSETEG00000007762	-	77	80.734	ENSACLG00000022738	lsm4	50	97.260	Astatotilapia_calliptera
ENSETEG00000007762	-	98	78.049	ENSAMXG00000016932	lsm4	86	81.967	Astyanax_mexicanus
ENSETEG00000007762	-	100	98.387	ENSBTAG00000008578	LSM4	89	98.387	Bos_taurus
ENSETEG00000007762	-	55	72.059	WBGene00003078	lsm-4	55	72.059	Caenorhabditis_elegans
ENSETEG00000007762	-	100	98.387	ENSCJAG00000014171	LSM4	99	98.387	Callithrix_jacchus
ENSETEG00000007762	-	99	98.374	ENSCAFG00000014900	LSM4	80	98.374	Canis_familiaris
ENSETEG00000007762	-	100	98.387	ENSCAFG00020012137	LSM4	89	98.387	Canis_lupus_dingo
ENSETEG00000007762	-	100	98.387	ENSCHIG00000010928	LSM4	82	98.387	Capra_hircus
ENSETEG00000007762	-	100	97.581	ENSTSYG00000030906	LSM4	99	97.581	Carlito_syrichta
ENSETEG00000007762	-	100	95.968	ENSCAPG00000014140	LSM4	89	95.968	Cavia_aperea
ENSETEG00000007762	-	100	95.968	ENSCPOG00000024117	LSM4	89	95.968	Cavia_porcellus
ENSETEG00000007762	-	100	98.387	ENSCCAG00000036308	LSM4	99	98.387	Cebus_capucinus
ENSETEG00000007762	-	100	98.387	ENSCATG00000029311	LSM4	99	98.387	Cercocebus_atys
ENSETEG00000007762	-	100	94.355	ENSCLAG00000010828	LSM4	89	94.355	Chinchilla_lanigera
ENSETEG00000007762	-	100	98.387	ENSCSAG00000005370	LSM4	89	98.387	Chlorocebus_sabaeus
ENSETEG00000007762	-	100	79.839	ENSCPBG00000012925	LSM4	89	77.419	Chrysemys_picta_bellii
ENSETEG00000007762	-	57	90.141	ENSCING00000007519	-	57	90.411	Ciona_intestinalis
ENSETEG00000007762	-	57	91.549	ENSCSAVG00000008596	-	58	91.781	Ciona_savignyi
ENSETEG00000007762	-	100	98.387	ENSCANG00000043686	LSM4	99	98.387	Colobus_angolensis_palliatus
ENSETEG00000007762	-	100	94.355	ENSCGRG00001014436	Lsm4	89	94.355	Cricetulus_griseus_chok1gshd
ENSETEG00000007762	-	100	94.355	ENSCGRG00000009398	Lsm4	90	94.355	Cricetulus_griseus_crigri
ENSETEG00000007762	-	66	93.902	ENSCSEG00000016127	lsm4	86	74.590	Cynoglossus_semilaevis
ENSETEG00000007762	-	98	74.400	ENSCVAG00000021828	lsm4	56	95.890	Cyprinodon_variegatus
ENSETEG00000007762	-	98	74.400	ENSCVAG00000010601	lsm4	51	95.890	Cyprinodon_variegatus
ENSETEG00000007762	-	97	76.190	ENSDARG00000023852	lsm4	57	97.260	Danio_rerio
ENSETEG00000007762	-	100	95.968	ENSDORG00000024225	Lsm4	89	95.968	Dipodomys_ordii
ENSETEG00000007762	-	100	98.387	ENSECAG00000010141	LSM4	51	98.387	Equus_caballus
ENSETEG00000007762	-	95	82.500	ENSELUG00000012821	lsm4	89	80.508	Esox_lucius
ENSETEG00000007762	-	100	98.387	ENSFCAG00000040580	LSM4	99	98.387	Felis_catus
ENSETEG00000007762	-	100	79.032	ENSFALG00000009478	LSM4	89	76.613	Ficedula_albicollis
ENSETEG00000007762	-	100	95.161	ENSFDAG00000010124	LSM4	90	95.161	Fukomys_damarensis
ENSETEG00000007762	-	66	95.122	ENSGMOG00000007729	lsm4	50	97.260	Gadus_morhua
ENSETEG00000007762	-	100	79.032	ENSGALG00000003385	LSM4	89	76.613	Gallus_gallus
ENSETEG00000007762	-	77	79.817	ENSGAFG00000004903	lsm4	55	93.151	Gambusia_affinis
ENSETEG00000007762	-	100	79.839	ENSGAGG00000017812	LSM4	89	77.419	Gopherus_agassizii
ENSETEG00000007762	-	100	98.387	ENSGGOG00000012914	-	99	98.387	Gorilla_gorilla
ENSETEG00000007762	-	100	95.161	ENSHGLG00000006568	LSM4	89	95.161	Heterocephalus_glaber_female
ENSETEG00000007762	-	63	98.718	ENSHGLG00100007894	LSM4	84	98.718	Heterocephalus_glaber_male
ENSETEG00000007762	-	98	73.770	ENSHCOG00000008819	lsm4	51	97.260	Hippocampus_comes
ENSETEG00000007762	-	98	77.236	ENSIPUG00000005368	Lsm4	51	97.260	Ictalurus_punctatus
ENSETEG00000007762	-	100	98.387	ENSSTOG00000016494	LSM4	89	98.387	Ictidomys_tridecemlineatus
ENSETEG00000007762	-	100	95.161	ENSJJAG00000017420	Lsm4	89	95.161	Jaculus_jaculus
ENSETEG00000007762	-	57	98.592	ENSKMAG00000005073	lsm4	51	98.630	Kryptolebias_marmoratus
ENSETEG00000007762	-	98	81.148	ENSLACG00000015861	LSM4	87	81.148	Latimeria_chalumnae
ENSETEG00000007762	-	92	81.579	ENSLOCG00000002025	lsm4	52	95.890	Lepisosteus_oculatus
ENSETEG00000007762	-	100	100.000	ENSLAFG00000017459	LSM4	89	100.000	Loxodonta_africana
ENSETEG00000007762	-	100	98.387	ENSMFAG00000031194	LSM4	99	98.387	Macaca_fascicularis
ENSETEG00000007762	-	100	98.387	ENSMMUG00000004405	LSM4	99	98.387	Macaca_mulatta
ENSETEG00000007762	-	100	98.387	ENSMNEG00000042899	LSM4	99	98.387	Macaca_nemestrina
ENSETEG00000007762	-	100	98.387	ENSMLEG00000027948	LSM4	99	98.387	Mandrillus_leucophaeus
ENSETEG00000007762	-	98	77.236	ENSMAMG00000006190	lsm4	86	74.590	Mastacembelus_armatus
ENSETEG00000007762	-	77	80.734	ENSMZEG00005016420	lsm4	50	97.260	Maylandia_zebra
ENSETEG00000007762	-	100	80.800	ENSMGAG00000004976	LSM4	89	88.710	Meleagris_gallopavo
ENSETEG00000007762	-	100	97.581	ENSMICG00000000222	LSM4	99	97.581	Microcebus_murinus
ENSETEG00000007762	-	100	94.355	ENSMOCG00000020861	Lsm4	89	94.355	Microtus_ochrogaster
ENSETEG00000007762	-	100	95.968	ENSMODG00000015044	-	100	95.968	Monodelphis_domestica
ENSETEG00000007762	-	98	76.000	ENSMALG00000018159	lsm4	51	98.630	Monopterus_albus
ENSETEG00000007762	-	100	94.355	MGP_CAROLIEiJ_G0031158	Lsm4	89	94.355	Mus_caroli
ENSETEG00000007762	-	100	94.355	ENSMUSG00000031848	Lsm4	89	94.355	Mus_musculus
ENSETEG00000007762	-	100	94.355	MGP_PahariEiJ_G0021623	Lsm4	89	94.355	Mus_pahari
ENSETEG00000007762	-	100	94.355	MGP_SPRETEiJ_G0032276	Lsm4	89	94.355	Mus_spretus
ENSETEG00000007762	-	100	98.387	ENSMPUG00000015589	LSM4	89	98.387	Mustela_putorius_furo
ENSETEG00000007762	-	100	98.387	ENSMLUG00000004010	LSM4	89	98.387	Myotis_lucifugus
ENSETEG00000007762	-	100	94.355	ENSNGAG00000008644	Lsm4	93	94.355	Nannospalax_galili
ENSETEG00000007762	-	100	92.742	ENSMEUG00000013229	LSM4	100	92.742	Notamacropus_eugenii
ENSETEG00000007762	-	100	91.935	ENSOPRG00000005575	LSM4	100	81.452	Ochotona_princeps
ENSETEG00000007762	-	100	85.484	ENSODEG00000004519	-	89	71.774	Octodon_degus
ENSETEG00000007762	-	100	95.161	ENSODEG00000020549	-	89	95.161	Octodon_degus
ENSETEG00000007762	-	100	69.355	ENSODEG00000011712	-	86	69.355	Octodon_degus
ENSETEG00000007762	-	77	80.734	ENSONIG00000012724	lsm4	50	97.260	Oreochromis_niloticus
ENSETEG00000007762	-	59	97.260	ENSOANG00000007434	LSM4	63	97.260	Ornithorhynchus_anatinus
ENSETEG00000007762	-	100	83.065	ENSORLG00000008391	lsm4	51	98.630	Oryzias_latipes
ENSETEG00000007762	-	100	83.065	ENSORLG00020014829	lsm4	51	98.630	Oryzias_latipes_hni
ENSETEG00000007762	-	100	83.065	ENSORLG00015010205	lsm4	51	98.630	Oryzias_latipes_hsok
ENSETEG00000007762	-	100	80.645	ENSOMEG00000003606	lsm4	51	95.890	Oryzias_melastigma
ENSETEG00000007762	-	69	97.647	ENSOGAG00000027992	LSM4	50	98.630	Otolemur_garnettii
ENSETEG00000007762	-	95	98.305	ENSOARG00000012553	LSM4	93	98.305	Ovis_aries
ENSETEG00000007762	-	100	98.387	ENSPPAG00000044045	-	99	98.387	Pan_paniscus
ENSETEG00000007762	-	100	98.387	ENSPPRG00000018264	LSM4	99	98.387	Panthera_pardus
ENSETEG00000007762	-	100	98.387	ENSPTIG00000006306	LSM4	90	98.387	Panthera_tigris_altaica
ENSETEG00000007762	-	100	98.387	ENSPTRG00000031470	LSM4	99	98.387	Pan_troglodytes
ENSETEG00000007762	-	100	98.387	ENSPANG00000014399	LSM4	99	98.387	Papio_anubis
ENSETEG00000007762	-	98	79.508	ENSPKIG00000006154	lsm4	57	97.260	Paramormyrops_kingsleyae
ENSETEG00000007762	-	100	79.032	ENSPSIG00000012358	LSM4	90	76.613	Pelodiscus_sinensis
ENSETEG00000007762	-	100	94.355	ENSPEMG00000001358	Lsm4	89	94.355	Peromyscus_maniculatus_bairdii
ENSETEG00000007762	-	98	77.600	ENSPLAG00000016267	lsm4	51	97.260	Poecilia_latipinna
ENSETEG00000007762	-	98	76.000	ENSPMEG00000016378	lsm4	53	97.260	Poecilia_mexicana
ENSETEG00000007762	-	100	98.387	ENSPPYG00000009736	LSM4	89	98.387	Pongo_abelii
ENSETEG00000007762	-	100	100.000	ENSPCAG00000008513	LSM4	100	100.000	Procavia_capensis
ENSETEG00000007762	-	100	97.581	ENSPCOG00000019837	LSM4	99	97.581	Propithecus_coquereli
ENSETEG00000007762	-	100	98.387	ENSPVAG00000015383	LSM4	89	98.387	Pteropus_vampyrus
ENSETEG00000007762	-	77	80.734	ENSPNYG00000016794	lsm4	50	97.260	Pundamilia_nyererei
ENSETEG00000007762	-	96	81.667	ENSPNAG00000016598	lsm4	54	97.260	Pygocentrus_nattereri
ENSETEG00000007762	-	100	94.355	ENSRNOG00000019572	Lsm4	89	94.355	Rattus_norvegicus
ENSETEG00000007762	-	100	98.387	ENSRBIG00000024717	LSM4	99	98.387	Rhinopithecus_bieti
ENSETEG00000007762	-	100	98.387	ENSRROG00000045706	LSM4	99	98.387	Rhinopithecus_roxellana
ENSETEG00000007762	-	100	98.387	ENSSBOG00000022455	LSM4	99	98.387	Saimiri_boliviensis_boliviensis
ENSETEG00000007762	-	100	95.968	ENSSHAG00000011559	LSM4	89	95.968	Sarcophilus_harrisii
ENSETEG00000007762	-	98	77.869	ENSSFOG00015021067	lsm4	52	97.260	Scleropages_formosus
ENSETEG00000007762	-	100	98.387	ENSSSCG00000034314	LSM4	89	98.387	Sus_scrofa
ENSETEG00000007762	-	98	80.800	ENSTRUG00000021737	lsm4	51	94.521	Takifugu_rubripes
ENSETEG00000007762	-	98	78.400	ENSTNIG00000010191	lsm4	51	95.890	Tetraodon_nigroviridis
ENSETEG00000007762	-	100	98.387	ENSUAMG00000000665	LSM4	89	98.387	Ursus_americanus
ENSETEG00000007762	-	100	98.387	ENSUMAG00000009013	LSM4	89	98.387	Ursus_maritimus
ENSETEG00000007762	-	100	98.387	ENSVVUG00000008136	LSM4	64	98.387	Vulpes_vulpes
ENSETEG00000007762	-	100	90.323	ENSXETG00000024933	lsm4	89	75.000	Xenopus_tropicalis