EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000007878 (Gene tree)
Gene ID: -
Gene Symbol: RBM42
Alias: MGC10433
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 41546 bases
Position: chrGeneScaffold_8991:11146-52691
Accession: 28117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000006396	RRM_1	PF00076.22	3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000007879	RBM42-201	1344	-	ENSETEP00000006396	447 (aa)	-	UPI0000E413CF

Gene Model

Click here to download ENSETEG00000007878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000007878's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000007878	RBM42	71	92.857	ENSG00000126254	RBM42	91	92.754	Homo_sapiens
ENSETEG00000007878	RBM42	71	91.071	ENSAMEG00000000524	RBM42	71	91.304	Ailuropoda_melanoleuca
ENSETEG00000007878	RBM42	74	89.855	ENSANAG00000027537	RBM42	93	89.855	Aotus_nancymaae
ENSETEG00000007878	RBM42	74	94.203	ENSBTAG00000013440	RBM42	75	94.203	Bos_taurus
ENSETEG00000007878	RBM42	74	91.304	ENSCJAG00000010220	RBM42	93	91.304	Callithrix_jacchus
ENSETEG00000007878	RBM42	74	91.304	ENSCAFG00020018628	RBM42	83	91.304	Canis_lupus_dingo
ENSETEG00000007878	RBM42	74	94.203	ENSCHIG00000009518	RBM42	76	94.203	Capra_hircus
ENSETEG00000007878	RBM42	74	94.203	ENSTSYG00000014688	RBM42	93	94.203	Carlito_syrichta
ENSETEG00000007878	RBM42	59	76.296	ENSCAPG00000009566	RBM42	70	79.259	Cavia_aperea
ENSETEG00000007878	RBM42	72	93.333	ENSCPOG00000012365	RBM42	75	94.203	Cavia_porcellus
ENSETEG00000007878	RBM42	74	91.304	ENSCCAG00000034440	RBM42	93	91.304	Cebus_capucinus
ENSETEG00000007878	RBM42	71	92.857	ENSCATG00000041924	RBM42	91	92.754	Cercocebus_atys
ENSETEG00000007878	RBM42	72	93.333	ENSCLAG00000012865	RBM42	75	94.203	Chinchilla_lanigera
ENSETEG00000007878	RBM42	71	92.857	ENSCSAG00000004422	RBM42	75	92.754	Chlorocebus_sabaeus
ENSETEG00000007878	RBM42	69	87.234	ENSCANG00000030272	RBM42	90	80.000	Colobus_angolensis_palliatus
ENSETEG00000007878	RBM42	73	87.879	ENSCGRG00001018540	Rbm42	75	87.879	Cricetulus_griseus_chok1gshd
ENSETEG00000007878	RBM42	74	89.855	ENSDNOG00000037397	RBM42	76	89.855	Dasypus_novemcinctus
ENSETEG00000007878	RBM42	72	86.667	ENSDORG00000013001	Rbm42	75	87.879	Dipodomys_ordii
ENSETEG00000007878	RBM42	73	93.939	ENSEASG00005001074	RBM42	76	93.939	Equus_asinus_asinus
ENSETEG00000007878	RBM42	73	93.939	ENSECAG00000018215	RBM42	76	93.939	Equus_caballus
ENSETEG00000007878	RBM42	74	92.754	ENSFCAG00000006376	RBM42	93	92.754	Felis_catus
ENSETEG00000007878	RBM42	71	92.982	ENSFDAG00000007440	RBM42	75	93.939	Fukomys_damarensis
ENSETEG00000007878	RBM42	74	92.754	ENSGGOG00000009972	RBM42	91	92.754	Gorilla_gorilla
ENSETEG00000007878	RBM42	72	85.484	ENSHGLG00000008418	RBM42	76	86.957	Heterocephalus_glaber_female
ENSETEG00000007878	RBM42	72	85.484	ENSHGLG00100018667	RBM42	76	86.957	Heterocephalus_glaber_male
ENSETEG00000007878	RBM42	74	92.754	ENSSTOG00000013050	RBM42	75	92.754	Ictidomys_tridecemlineatus
ENSETEG00000007878	RBM42	72	90.476	ENSJJAG00000010421	Rbm42	75	90.476	Jaculus_jaculus
ENSETEG00000007878	RBM42	69	95.652	ENSLAFG00000014993	RBM42	70	94.203	Loxodonta_africana
ENSETEG00000007878	RBM42	71	92.857	ENSMFAG00000002758	RBM42	91	92.754	Macaca_fascicularis
ENSETEG00000007878	RBM42	74	92.754	ENSMMUG00000018954	RBM42	91	92.754	Macaca_mulatta
ENSETEG00000007878	RBM42	74	92.754	ENSMNEG00000030009	RBM42	91	92.754	Macaca_nemestrina
ENSETEG00000007878	RBM42	71	92.857	ENSMLEG00000036119	RBM42	91	92.754	Mandrillus_leucophaeus
ENSETEG00000007878	RBM42	74	94.203	ENSMICG00000009880	RBM42	93	94.203	Microcebus_murinus
ENSETEG00000007878	RBM42	73	89.394	ENSMOCG00000000405	Rbm42	75	89.394	Microtus_ochrogaster
ENSETEG00000007878	RBM42	73	90.909	MGP_CAROLIEiJ_G0029536	Rbm42	75	90.909	Mus_caroli
ENSETEG00000007878	RBM42	73	90.909	ENSMUSG00000036733	Rbm42	75	90.909	Mus_musculus
ENSETEG00000007878	RBM42	73	90.909	MGP_PahariEiJ_G0012770	Rbm42	75	90.909	Mus_pahari
ENSETEG00000007878	RBM42	73	90.909	MGP_SPRETEiJ_G0030632	Rbm42	75	90.909	Mus_spretus
ENSETEG00000007878	RBM42	74	92.754	ENSMPUG00000006288	RBM42	76	92.754	Mustela_putorius_furo
ENSETEG00000007878	RBM42	74	89.855	ENSMLUG00000011334	RBM42	71	89.855	Myotis_lucifugus
ENSETEG00000007878	RBM42	73	84.848	ENSNGAG00000019698	Rbm42	75	84.848	Nannospalax_galili
ENSETEG00000007878	RBM42	59	77.407	ENSNLEG00000011272	-	71	80.370	Nomascus_leucogenys
ENSETEG00000007878	RBM42	74	88.406	ENSOPRG00000001229	RBM42	72	88.406	Ochotona_princeps
ENSETEG00000007878	RBM42	74	94.203	ENSODEG00000013705	RBM42	75	94.203	Octodon_degus
ENSETEG00000007878	RBM42	71	94.643	ENSOCUG00000003337	RBM42	75	94.203	Oryctolagus_cuniculus
ENSETEG00000007878	RBM42	71	94.643	ENSOGAG00000004144	RBM42	71	94.203	Otolemur_garnettii
ENSETEG00000007878	RBM42	69	93.333	ENSOARG00000004926	RBM42	69	94.203	Ovis_aries
ENSETEG00000007878	RBM42	74	91.304	ENSPPAG00000037315	RBM42	93	91.304	Pan_paniscus
ENSETEG00000007878	RBM42	74	92.754	ENSPPRG00000016784	RBM42	93	92.754	Panthera_pardus
ENSETEG00000007878	RBM42	74	92.754	ENSPTIG00000019270	RBM42	93	92.754	Panthera_tigris_altaica
ENSETEG00000007878	RBM42	71	92.857	ENSPTRG00000010852	RBM42	91	92.754	Pan_troglodytes
ENSETEG00000007878	RBM42	74	92.754	ENSPANG00000017032	RBM42	91	92.754	Papio_anubis
ENSETEG00000007878	RBM42	73	89.394	ENSPEMG00000012065	Rbm42	75	89.394	Peromyscus_maniculatus_bairdii
ENSETEG00000007878	RBM42	71	92.857	ENSPPYG00000009871	RBM42	70	92.754	Pongo_abelii
ENSETEG00000007878	RBM42	71	96.429	ENSPCAG00000013053	RBM42	71	95.652	Procavia_capensis
ENSETEG00000007878	RBM42	59	77.778	ENSPCOG00000020672	RBM42	66	80.741	Propithecus_coquereli
ENSETEG00000007878	RBM42	74	94.203	ENSPCOG00000026433	-	93	94.203	Propithecus_coquereli
ENSETEG00000007878	RBM42	74	92.754	ENSPVAG00000012815	RBM42	71	92.754	Pteropus_vampyrus
ENSETEG00000007878	RBM42	73	90.909	ENSRNOG00000024278	Rbm42	75	90.909	Rattus_norvegicus
ENSETEG00000007878	RBM42	71	92.857	ENSRBIG00000007566	RBM42	91	92.754	Rhinopithecus_bieti
ENSETEG00000007878	RBM42	74	92.754	ENSRROG00000042313	RBM42	93	92.754	Rhinopithecus_roxellana
ENSETEG00000007878	RBM42	59	77.407	ENSSBOG00000030666	RBM42	71	80.370	Saimiri_boliviensis_boliviensis
ENSETEG00000007878	RBM42	59	76.667	ENSSARG00000010724	RBM42	65	95.349	Sorex_araneus
ENSETEG00000007878	RBM42	74	88.406	ENSSSCG00000002905	RBM42	80	88.406	Sus_scrofa
ENSETEG00000007878	RBM42	71	91.071	ENSUAMG00000020711	RBM42	76	91.304	Ursus_americanus
ENSETEG00000007878	RBM42	71	91.071	ENSUMAG00000020223	RBM42	75	91.304	Ursus_maritimus
ENSETEG00000007878	RBM42	74	91.304	ENSVVUG00000015117	RBM42	76	91.304	Vulpes_vulpes