EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSETEG00000008139 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 1845 bases
Position: chrscaffold_28962:505-2349
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000006618	RRM_1	PF00076.22	3.9e-21	1	2
ENSETEP00000006618	RRM_1	PF00076.22	3.9e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000008142	-	1557	-	ENSETEP00000006618	519 (aa)	-	UPI0000E40520

Gene Model

Click here to download ENSETEG00000008139's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000008139's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSETEG00000008139	-	64	54.420	ENSETEG00000008553	-	77	54.420
ENSETEG00000008139	-	64	70.380	ENSETEG00000014756	-	84	70.380
ENSETEG00000008139	-	65	70.732	ENSETEG00000018937	-	71	70.845

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000008139	-	67	66.062	ENSG00000115053	NCL	90	64.906	Homo_sapiens
ENSETEG00000008139	-	89	66.757	ENSAMEG00000016289	NCL	71	66.938	Ailuropoda_melanoleuca
ENSETEG00000008139	-	64	58.263	ENSANAG00000024378	-	77	56.818	Aotus_nancymaae
ENSETEG00000008139	-	89	66.396	ENSANAG00000035814	-	72	66.396	Aotus_nancymaae
ENSETEG00000008139	-	82	66.486	ENSBTAG00000016174	NCL	70	66.667	Bos_taurus
ENSETEG00000008139	-	71	63.404	ENSBTAG00000026909	-	81	63.675	Bos_taurus
ENSETEG00000008139	-	57	67.347	ENSBTAG00000051320	-	68	67.692	Bos_taurus
ENSETEG00000008139	-	66	68.966	ENSBTAG00000050728	-	79	69.264	Bos_taurus
ENSETEG00000008139	-	64	66.396	ENSCJAG00000013538	NCL	73	66.396	Callithrix_jacchus
ENSETEG00000008139	-	89	66.486	ENSCAFG00000011037	NCL	72	66.667	Canis_familiaris
ENSETEG00000008139	-	80	66.486	ENSCAFG00020023145	NCL	70	66.667	Canis_lupus_dingo
ENSETEG00000008139	-	88	60.811	ENSCHIG00000026149	-	72	60.976	Capra_hircus
ENSETEG00000008139	-	99	58.127	ENSCHIG00000021052	-	89	59.292	Capra_hircus
ENSETEG00000008139	-	99	47.359	ENSCHIG00000012143	-	90	48.128	Capra_hircus
ENSETEG00000008139	-	81	66.757	ENSCHIG00000010894	-	69	66.938	Capra_hircus
ENSETEG00000008139	-	63	62.640	ENSTSYG00000036886	-	72	63.202	Carlito_syrichta
ENSETEG00000008139	-	88	64.310	ENSTSYG00000029779	-	73	64.310	Carlito_syrichta
ENSETEG00000008139	-	89	66.216	ENSTSYG00000004355	-	72	66.396	Carlito_syrichta
ENSETEG00000008139	-	88	62.259	ENSCAPG00000009405	NCL	70	62.431	Cavia_aperea
ENSETEG00000008139	-	89	64.324	ENSCPOG00000001034	NCL	71	64.499	Cavia_porcellus
ENSETEG00000008139	-	94	66.839	ENSCCAG00000000551	-	77	66.839	Cebus_capucinus
ENSETEG00000008139	-	64	66.396	ENSCCAG00000021040	-	53	66.310	Cebus_capucinus
ENSETEG00000008139	-	91	66.142	ENSCATG00000037033	NCL	72	66.938	Cercocebus_atys
ENSETEG00000008139	-	89	65.135	ENSCLAG00000013080	NCL	71	65.312	Chinchilla_lanigera
ENSETEG00000008139	-	64	66.757	ENSCSAG00000006660	NCL	80	66.667	Chlorocebus_sabaeus
ENSETEG00000008139	-	64	57.609	ENSCHOG00000012860	NCL	76	57.609	Choloepus_hoffmanni
ENSETEG00000008139	-	55	61.514	ENSCANG00000036756	NCL	82	62.179	Colobus_angolensis_palliatus
ENSETEG00000008139	-	89	60.163	ENSCGRG00001024315	-	74	60.326	Cricetulus_griseus_chok1gshd
ENSETEG00000008139	-	90	54.918	ENSCGRG00001022350	-	92	46.992	Cricetulus_griseus_chok1gshd
ENSETEG00000008139	-	64	54.768	ENSCGRG00000000507	-	54	54.918	Cricetulus_griseus_crigri
ENSETEG00000008139	-	82	60.163	ENSCGRG00000017894	-	69	60.326	Cricetulus_griseus_crigri
ENSETEG00000008139	-	64	61.035	ENSDNOG00000046347	-	53	61.202	Dasypus_novemcinctus
ENSETEG00000008139	-	89	65.323	ENSDNOG00000010783	-	72	65.499	Dasypus_novemcinctus
ENSETEG00000008139	-	89	59.452	ENSDORG00000012513	-	72	59.452	Dipodomys_ordii
ENSETEG00000008139	-	63	50.716	ENSDORG00000023596	-	72	52.941	Dipodomys_ordii
ENSETEG00000008139	-	92	68.720	ENSEASG00005008488	NCL	86	69.048	Equus_asinus_asinus
ENSETEG00000008139	-	99	61.806	ENSECAG00000021868	NCL	85	61.253	Equus_caballus
ENSETEG00000008139	-	64	61.957	ENSEEUG00000005913	NCL	68	61.957	Erinaceus_europaeus
ENSETEG00000008139	-	89	66.486	ENSFCAG00000027622	NCL	72	66.667	Felis_catus
ENSETEG00000008139	-	85	65.405	ENSFDAG00000014291	NCL	71	65.583	Fukomys_damarensis
ENSETEG00000008139	-	70	68.720	ENSGGOG00000004300	NCL	72	69.048	Gorilla_gorilla
ENSETEG00000008139	-	89	65.676	ENSHGLG00000002031	-	78	65.854	Heterocephalus_glaber_female
ENSETEG00000008139	-	57	58.095	ENSHGLG00000005133	-	80	58.140	Heterocephalus_glaber_female
ENSETEG00000008139	-	64	59.726	ENSHGLG00000011069	-	53	59.726	Heterocephalus_glaber_female
ENSETEG00000008139	-	99	53.043	ENSHGLG00100000745	-	90	53.391	Heterocephalus_glaber_male
ENSETEG00000008139	-	89	65.405	ENSHGLG00100014537	-	79	65.583	Heterocephalus_glaber_male
ENSETEG00000008139	-	89	56.742	ENSJJAG00000016165	Ncl	72	56.716	Jaculus_jaculus
ENSETEG00000008139	-	99	53.289	ENSLAFG00000013061	NCL	77	62.032	Loxodonta_africana
ENSETEG00000008139	-	89	66.757	ENSMFAG00000040385	NCL	72	66.938	Macaca_fascicularis
ENSETEG00000008139	-	89	66.757	ENSMMUG00000018094	NCL	72	69.048	Macaca_mulatta
ENSETEG00000008139	-	69	68.720	ENSMNEG00000023839	NCL	72	69.048	Macaca_nemestrina
ENSETEG00000008139	-	98	62.110	ENSMLEG00000028935	NCL	72	66.938	Mandrillus_leucophaeus
ENSETEG00000008139	-	89	66.757	ENSMICG00000002538	-	72	66.938	Microcebus_murinus
ENSETEG00000008139	-	64	57.658	ENSMICG00000029975	-	79	57.919	Microcebus_murinus
ENSETEG00000008139	-	89	59.128	MGP_CAROLIEiJ_G0014362	Ncl	71	59.290	Mus_caroli
ENSETEG00000008139	-	89	59.401	ENSMUSG00000026234	Ncl	71	59.563	Mus_musculus
ENSETEG00000008139	-	89	59.239	MGP_PahariEiJ_G0027599	Ncl	71	59.401	Mus_pahari
ENSETEG00000008139	-	89	59.401	MGP_SPRETEiJ_G0015164	Ncl	71	59.563	Mus_spretus
ENSETEG00000008139	-	99	67.297	ENSMLUG00000014547	NCL	83	67.480	Myotis_lucifugus
ENSETEG00000008139	-	89	60.976	ENSNGAG00000002454	-	71	61.141	Nannospalax_galili
ENSETEG00000008139	-	87	50.279	ENSNGAG00000006188	-	69	51.128	Nannospalax_galili
ENSETEG00000008139	-	77	56.410	ENSNLEG00000014107	-	65	61.111	Nomascus_leucogenys
ENSETEG00000008139	-	63	63.812	ENSODEG00000002748	-	91	53.477	Octodon_degus
ENSETEG00000008139	-	89	66.116	ENSODEG00000003281	-	71	66.298	Octodon_degus
ENSETEG00000008139	-	73	62.338	ENSODEG00000002441	-	93	53.679	Octodon_degus
ENSETEG00000008139	-	64	66.102	ENSODEG00000007803	-	67	66.667	Octodon_degus
ENSETEG00000008139	-	99	53.400	ENSOCUG00000004312	NCL	89	55.426	Oryctolagus_cuniculus
ENSETEG00000008139	-	64	64.595	ENSOARG00000013710	-	72	64.770	Ovis_aries
ENSETEG00000008139	-	64	66.220	ENSOARG00000020709	-	91	52.202	Ovis_aries
ENSETEG00000008139	-	64	54.848	ENSOARG00000004072	-	74	55.000	Ovis_aries
ENSETEG00000008139	-	89	66.757	ENSPPAG00000011619	NCL	72	69.048	Pan_paniscus
ENSETEG00000008139	-	89	66.216	ENSPPRG00000012603	NCL	72	66.396	Panthera_pardus
ENSETEG00000008139	-	88	66.216	ENSPTIG00000010393	NCL	71	66.396	Panthera_tigris_altaica
ENSETEG00000008139	-	89	66.757	ENSPTRG00000013025	NCL	72	69.048	Pan_troglodytes
ENSETEG00000008139	-	89	66.757	ENSPANG00000010292	NCL	72	66.938	Papio_anubis
ENSETEG00000008139	-	89	59.259	ENSPPYG00000013265	NCL	72	60.714	Pongo_abelii
ENSETEG00000008139	-	99	60.648	ENSPCOG00000003051	-	79	66.667	Propithecus_coquereli
ENSETEG00000008139	-	63	64.124	ENSPCOG00000004160	-	73	64.306	Propithecus_coquereli
ENSETEG00000008139	-	94	67.568	ENSPVAG00000000297	NCL	81	67.368	Pteropus_vampyrus
ENSETEG00000008139	-	89	60.163	ENSRNOG00000018273	Ncl	72	60.326	Rattus_norvegicus
ENSETEG00000008139	-	64	64.324	ENSRBIG00000037525	-	55	63.947	Rhinopithecus_bieti
ENSETEG00000008139	-	89	66.757	ENSRROG00000028756	-	72	69.048	Rhinopithecus_roxellana
ENSETEG00000008139	-	87	66.163	ENSRROG00000036103	-	76	66.163	Rhinopithecus_roxellana
ENSETEG00000008139	-	60	56.459	ENSSBOG00000023094	-	73	56.459	Saimiri_boliviensis_boliviensis
ENSETEG00000008139	-	89	66.125	ENSSBOG00000029193	-	72	66.125	Saimiri_boliviensis_boliviensis
ENSETEG00000008139	-	64	61.475	ENSSBOG00000027549	-	87	52.878	Saimiri_boliviensis_boliviensis
ENSETEG00000008139	-	86	66.216	ENSSSCG00000016275	NCL	70	66.396	Sus_scrofa
ENSETEG00000008139	-	78	57.143	ENSTBEG00000002469	-	65	56.973	Tupaia_belangeri
ENSETEG00000008139	-	78	61.842	ENSTBEG00000001546	-	65	60.000	Tupaia_belangeri
ENSETEG00000008139	-	85	64.754	ENSTTRG00000009094	NCL	71	65.479	Tursiops_truncatus
ENSETEG00000008139	-	92	60.297	ENSUAMG00000005639	NCL	84	60.223	Ursus_americanus
ENSETEG00000008139	-	89	66.757	ENSUMAG00000015789	NCL	72	66.938	Ursus_maritimus
ENSETEG00000008139	-	81	54.545	ENSVPAG00000001796	NCL	69	55.714	Vicugna_pacos
ENSETEG00000008139	-	65	66.400	ENSVVUG00000025564	NCL	55	66.396	Vulpes_vulpes