EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSETEG00000008268 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 496 bases
Position: chrGeneScaffold_6848:2380-2875
Accession: 101660652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000006717	zf-U1	PF06220.12	6.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000008268	-	468	XM_004717228	ENSETEP00000006717	156 (aa)	XP_004717285	UPI0000E4231D

Gene Model

Click here to download ENSETEG00000008268's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000008268's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSETEG00000008268	-	96	74.026	ENSETEG00000005056	-	80	72.441
ENSETEG00000008268	-	100	89.744	ENSETEG00000011265	-	100	89.744
ENSETEG00000008268	-	53	91.566	ENSETEG00000008756	-	75	90.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000008268	-	100	96.154	ENSG00000124562	SNRPC	98	96.154	Homo_sapiens
ENSETEG00000008268	-	100	94.231	ENSAMEG00000000963	SNRPC	85	95.455	Ailuropoda_melanoleuca
ENSETEG00000008268	-	100	92.949	ENSACAG00000015721	SNRPC	86	94.156	Anolis_carolinensis
ENSETEG00000008268	-	100	91.667	ENSANAG00000019157	-	98	91.667	Aotus_nancymaae
ENSETEG00000008268	-	99	87.742	ENSANAG00000020588	-	91	87.742	Aotus_nancymaae
ENSETEG00000008268	-	100	84.615	ENSANAG00000021026	-	90	84.615	Aotus_nancymaae
ENSETEG00000008268	-	100	72.436	ENSANAG00000021444	-	50	77.500	Aotus_nancymaae
ENSETEG00000008268	-	100	95.513	ENSANAG00000007843	-	98	95.513	Aotus_nancymaae
ENSETEG00000008268	-	100	96.154	ENSANAG00000019696	-	98	96.154	Aotus_nancymaae
ENSETEG00000008268	-	100	82.051	ENSAMXG00000032641	snrpc	76	58.519	Astyanax_mexicanus
ENSETEG00000008268	-	100	96.154	ENSBTAG00000024549	SNRPC	98	96.154	Bos_taurus
ENSETEG00000008268	-	100	96.154	ENSCJAG00000015321	-	98	96.154	Callithrix_jacchus
ENSETEG00000008268	-	100	94.872	ENSCJAG00000041822	-	98	94.872	Callithrix_jacchus
ENSETEG00000008268	-	100	96.154	ENSCJAG00000043055	-	98	96.154	Callithrix_jacchus
ENSETEG00000008268	-	76	96.610	ENSCAFG00000001231	-	93	96.610	Canis_familiaris
ENSETEG00000008268	-	100	93.590	ENSCAFG00000031775	-	98	93.590	Canis_familiaris
ENSETEG00000008268	-	100	96.154	ENSCAFG00020005945	-	98	96.154	Canis_lupus_dingo
ENSETEG00000008268	-	100	93.590	ENSCAFG00020017383	-	98	93.590	Canis_lupus_dingo
ENSETEG00000008268	-	100	95.513	ENSCHIG00000012087	-	98	95.513	Capra_hircus
ENSETEG00000008268	-	100	87.179	ENSTSYG00000029745	-	62	91.057	Carlito_syrichta
ENSETEG00000008268	-	100	79.487	ENSTSYG00000025721	-	51	77.108	Carlito_syrichta
ENSETEG00000008268	-	100	96.154	ENSTSYG00000011216	-	98	96.154	Carlito_syrichta
ENSETEG00000008268	-	89	95.683	ENSCAPG00000005161	SNRPC	98	95.683	Cavia_aperea
ENSETEG00000008268	-	100	96.154	ENSCPOG00000008563	SNRPC	98	96.154	Cavia_porcellus
ENSETEG00000008268	-	100	66.667	ENSCCAG00000028293	-	59	85.714	Cebus_capucinus
ENSETEG00000008268	-	100	78.205	ENSCCAG00000026624	-	65	78.846	Cebus_capucinus
ENSETEG00000008268	-	98	76.471	ENSCCAG00000022209	-	93	76.471	Cebus_capucinus
ENSETEG00000008268	-	98	87.582	ENSCCAG00000022751	-	93	87.582	Cebus_capucinus
ENSETEG00000008268	-	100	96.154	ENSCATG00000035787	SNRPC	98	96.154	Cercocebus_atys
ENSETEG00000008268	-	100	96.154	ENSCLAG00000016920	SNRPC	98	96.154	Chinchilla_lanigera
ENSETEG00000008268	-	99	80.000	ENSCLAG00000010242	-	75	82.787	Chinchilla_lanigera
ENSETEG00000008268	-	100	78.205	ENSCHOG00000011439	SNRPC	86	79.221	Choloepus_hoffmanni
ENSETEG00000008268	-	100	94.231	ENSCPBG00000027142	SNRPC	98	94.231	Chrysemys_picta_bellii
ENSETEG00000008268	-	77	56.911	ENSCING00000021229	ci-zf(matrin)-4	61	72.727	Ciona_intestinalis
ENSETEG00000008268	-	100	96.154	ENSCANG00000028035	SNRPC	98	96.154	Colobus_angolensis_palliatus
ENSETEG00000008268	-	100	84.615	ENSCGRG00001021483	-	98	84.615	Cricetulus_griseus_chok1gshd
ENSETEG00000008268	-	100	95.513	ENSCGRG00001009011	-	98	95.513	Cricetulus_griseus_chok1gshd
ENSETEG00000008268	-	100	93.590	ENSCGRG00000005005	Snrpc	97	94.805	Cricetulus_griseus_crigri
ENSETEG00000008268	-	100	94.872	ENSDNOG00000034699	-	98	94.872	Dasypus_novemcinctus
ENSETEG00000008268	-	76	95.798	ENSDNOG00000042403	-	94	95.798	Dasypus_novemcinctus
ENSETEG00000008268	-	96	81.879	ENSDORG00000029823	-	56	93.506	Dipodomys_ordii
ENSETEG00000008268	-	100	96.154	ENSEASG00005021007	SNRPC	98	96.154	Equus_asinus_asinus
ENSETEG00000008268	-	100	96.154	ENSECAG00000026848	SNRPC	98	96.154	Equus_caballus
ENSETEG00000008268	-	99	77.419	ENSEEUG00000014633	SNRPC	89	52.332	Erinaceus_europaeus
ENSETEG00000008268	-	100	75.641	ENSELUG00000000815	SNRPC	50	92.308	Esox_lucius
ENSETEG00000008268	-	100	96.154	ENSFCAG00000044077	-	98	96.154	Felis_catus
ENSETEG00000008268	-	100	94.872	ENSFALG00000003756	SNRPC	98	94.872	Ficedula_albicollis
ENSETEG00000008268	-	100	96.154	ENSFDAG00000018111	SNRPC	98	96.154	Fukomys_damarensis
ENSETEG00000008268	-	100	93.631	ENSGALG00000002773	SNRPC	98	93.631	Gallus_gallus
ENSETEG00000008268	-	100	94.231	ENSGAGG00000003063	SNRPC	98	94.231	Gopherus_agassizii
ENSETEG00000008268	-	100	96.154	ENSGGOG00000012499	SNRPC	98	96.154	Gorilla_gorilla
ENSETEG00000008268	-	100	78.846	ENSHGLG00000017741	-	98	75.641	Heterocephalus_glaber_female
ENSETEG00000008268	-	100	96.154	ENSHGLG00000013981	SNRPC	98	96.154	Heterocephalus_glaber_female
ENSETEG00000008268	-	83	73.643	ENSHGLG00000005871	-	54	87.013	Heterocephalus_glaber_female
ENSETEG00000008268	-	100	96.154	ENSHGLG00100009478	SNRPC	98	96.154	Heterocephalus_glaber_male
ENSETEG00000008268	-	100	91.026	ENSHGLG00100017764	-	98	91.026	Heterocephalus_glaber_male
ENSETEG00000008268	-	100	78.846	ENSHGLG00100010786	-	98	75.641	Heterocephalus_glaber_male
ENSETEG00000008268	-	100	96.154	ENSSTOG00000013786	SNRPC	98	96.154	Ictidomys_tridecemlineatus
ENSETEG00000008268	-	100	95.513	ENSJJAG00000021741	Snrpc	98	95.513	Jaculus_jaculus
ENSETEG00000008268	-	76	86.667	ENSLACG00000013753	SNRPC	86	89.032	Latimeria_chalumnae
ENSETEG00000008268	-	100	96.154	ENSLAFG00000013534	SNRPC	98	96.154	Loxodonta_africana
ENSETEG00000008268	-	100	95.513	ENSMFAG00000030525	-	98	95.513	Macaca_fascicularis
ENSETEG00000008268	-	100	96.154	ENSMFAG00000031764	-	98	96.154	Macaca_fascicularis
ENSETEG00000008268	-	100	94.872	ENSMMUG00000000869	-	93	96.078	Macaca_mulatta
ENSETEG00000008268	-	100	94.872	ENSMMUG00000039415	-	98	94.872	Macaca_mulatta
ENSETEG00000008268	-	100	88.462	ENSMMUG00000045425	-	98	88.462	Macaca_mulatta
ENSETEG00000008268	-	100	96.154	ENSMNEG00000032731	SNRPC	98	96.154	Macaca_nemestrina
ENSETEG00000008268	-	100	96.154	ENSMLEG00000033916	-	98	96.154	Mandrillus_leucophaeus
ENSETEG00000008268	-	97	88.816	ENSMLEG00000040224	-	87	88.816	Mandrillus_leucophaeus
ENSETEG00000008268	-	100	92.949	ENSMGAG00000006054	SNRPC	98	92.949	Meleagris_gallopavo
ENSETEG00000008268	-	100	95.513	ENSMICG00000007339	-	98	95.513	Microcebus_murinus
ENSETEG00000008268	-	100	95.513	ENSMICG00000032183	-	98	95.513	Microcebus_murinus
ENSETEG00000008268	-	100	95.513	ENSMOCG00000017609	Snrpc	98	95.513	Microtus_ochrogaster
ENSETEG00000008268	-	100	94.872	ENSMODG00000013904	-	98	94.872	Monodelphis_domestica
ENSETEG00000008268	-	100	63.462	ENSMALG00000001197	snrpc	51	89.333	Monopterus_albus
ENSETEG00000008268	-	100	95.513	MGP_CAROLIEiJ_G0021308	Snrpc	98	95.513	Mus_caroli
ENSETEG00000008268	-	100	95.513	ENSMUSG00000024217	Snrpc	98	95.513	Mus_musculus
ENSETEG00000008268	-	62	94.792	MGP_SPRETEiJ_G0022221	-	64	94.805	Mus_spretus
ENSETEG00000008268	-	100	94.231	ENSMPUG00000003210	SNRPC	97	95.455	Mustela_putorius_furo
ENSETEG00000008268	-	100	94.231	ENSMLUG00000002488	SNRPC	97	95.455	Myotis_lucifugus
ENSETEG00000008268	-	100	95.513	ENSNGAG00000019686	Snrpc	98	95.513	Nannospalax_galili
ENSETEG00000008268	-	100	96.154	ENSNLEG00000034810	SNRPC	98	96.154	Nomascus_leucogenys
ENSETEG00000008268	-	89	94.964	ENSMEUG00000009300	SNRPC	98	94.964	Notamacropus_eugenii
ENSETEG00000008268	-	79	91.057	ENSODEG00000006008	-	55	93.506	Octodon_degus
ENSETEG00000008268	-	100	96.154	ENSODEG00000017080	-	98	96.154	Octodon_degus
ENSETEG00000008268	-	100	96.154	ENSODEG00000019633	-	98	96.154	Octodon_degus
ENSETEG00000008268	-	100	96.154	ENSODEG00000018985	-	98	96.154	Octodon_degus
ENSETEG00000008268	-	100	96.154	ENSODEG00000020370	-	98	96.154	Octodon_degus
ENSETEG00000008268	-	100	95.513	ENSODEG00000020201	-	98	95.513	Octodon_degus
ENSETEG00000008268	-	89	92.308	ENSOANG00000003405	SNRPC	97	92.308	Ornithorhynchus_anatinus
ENSETEG00000008268	-	100	95.513	ENSOCUG00000026430	-	97	95.513	Oryctolagus_cuniculus
ENSETEG00000008268	-	100	96.154	ENSOCUG00000026668	-	98	96.154	Oryctolagus_cuniculus
ENSETEG00000008268	-	99	81.169	ENSOGAG00000028405	-	99	79.085	Otolemur_garnettii
ENSETEG00000008268	-	100	94.231	ENSOGAG00000026269	-	98	94.231	Otolemur_garnettii
ENSETEG00000008268	-	97	96.053	ENSOGAG00000008755	-	87	95.455	Otolemur_garnettii
ENSETEG00000008268	-	100	96.154	ENSOARG00000010823	SNRPC	98	96.154	Ovis_aries
ENSETEG00000008268	-	100	96.154	ENSPPAG00000043871	SNRPC	98	96.154	Pan_paniscus
ENSETEG00000008268	-	100	96.154	ENSPPRG00000008647	-	98	96.154	Panthera_pardus
ENSETEG00000008268	-	100	96.154	ENSPTIG00000021867	-	98	96.154	Panthera_tigris_altaica
ENSETEG00000008268	-	97	58.553	ENSPTIG00000013329	-	50	79.221	Panthera_tigris_altaica
ENSETEG00000008268	-	100	96.154	ENSPTRG00000018070	SNRPC	98	96.154	Pan_troglodytes
ENSETEG00000008268	-	100	96.154	ENSPANG00000022802	-	98	96.154	Papio_anubis
ENSETEG00000008268	-	100	87.179	ENSPANG00000018228	-	92	87.179	Papio_anubis
ENSETEG00000008268	-	60	82.979	ENSPKIG00000003136	snrpc	50	89.744	Paramormyrops_kingsleyae
ENSETEG00000008268	-	99	92.857	ENSPSIG00000004876	SNRPC	75	92.857	Pelodiscus_sinensis
ENSETEG00000008268	-	99	56.494	ENSPMGG00000022162	snrpc	50	88.732	Periophthalmus_magnuspinnatus
ENSETEG00000008268	-	100	83.333	ENSPEMG00000002763	-	51	92.208	Peromyscus_maniculatus_bairdii
ENSETEG00000008268	-	100	95.513	ENSPEMG00000010773	Snrpc	98	95.513	Peromyscus_maniculatus_bairdii
ENSETEG00000008268	-	60	62.766	ENSPREG00000013017	snrpc	55	58.586	Poecilia_reticulata
ENSETEG00000008268	-	53	96.386	ENSPPYG00000029902	-	84	96.386	Pongo_abelii
ENSETEG00000008268	-	100	94.231	ENSPCAG00000016885	SNRPC	88	95.455	Procavia_capensis
ENSETEG00000008268	-	100	96.154	ENSPCOG00000004904	SNRPC	98	96.154	Propithecus_coquereli
ENSETEG00000008268	-	100	93.590	ENSPVAG00000015597	SNRPC	85	94.805	Pteropus_vampyrus
ENSETEG00000008268	-	86	57.463	ENSPNYG00000004900	snrpc	65	72.500	Pundamilia_nyererei
ENSETEG00000008268	-	100	95.513	ENSRNOG00000000493	Snrpc	98	95.513	Rattus_norvegicus
ENSETEG00000008268	-	100	96.154	ENSRBIG00000037567	-	98	96.154	Rhinopithecus_bieti
ENSETEG00000008268	-	100	95.513	ENSRBIG00000022998	-	98	95.513	Rhinopithecus_bieti
ENSETEG00000008268	-	100	96.154	ENSRROG00000041300	SNRPC	98	96.154	Rhinopithecus_roxellana
ENSETEG00000008268	-	100	96.154	ENSSBOG00000031528	-	98	96.154	Saimiri_boliviensis_boliviensis
ENSETEG00000008268	-	96	80.667	ENSSBOG00000032361	-	57	77.381	Saimiri_boliviensis_boliviensis
ENSETEG00000008268	-	99	94.805	ENSSHAG00000000945	-	86	94.805	Sarcophilus_harrisii
ENSETEG00000008268	-	58	84.444	ENSSFOG00015022422	snrpc	50	91.026	Scleropages_formosus
ENSETEG00000008268	-	100	95.513	ENSSPUG00000002502	SNRPC	98	95.513	Sphenodon_punctatus
ENSETEG00000008268	-	100	96.154	ENSSSCG00000001531	SNRPC	98	96.154	Sus_scrofa
ENSETEG00000008268	-	100	93.590	ENSTGUG00000001773	SNRPC	97	94.194	Taeniopygia_guttata
ENSETEG00000008268	-	62	87.500	ENSTBEG00000015356	-	55	88.312	Tupaia_belangeri
ENSETEG00000008268	-	100	88.462	ENSTBEG00000013022	-	100	88.462	Tupaia_belangeri
ENSETEG00000008268	-	100	94.231	ENSTTRG00000007827	SNRPC	85	95.455	Tursiops_truncatus
ENSETEG00000008268	-	76	95.798	ENSUAMG00000014125	SNRPC	80	95.798	Ursus_americanus
ENSETEG00000008268	-	97	92.053	ENSVVUG00000010467	-	85	92.157	Vulpes_vulpes
ENSETEG00000008268	-	100	94.872	ENSVVUG00000021947	-	98	94.872	Vulpes_vulpes