EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000008963 (Gene tree)
Gene ID: -
Gene Symbol: SF3B4
Alias: Hsh49|SAP49|SF3b49
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 3848 bases
Position: chrGeneScaffold_7319:38871-42718
Accession: 10771
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000007278	RRM_1	PF00076.22	1.7e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000008963	SF3B4-201	1272	-	ENSETEP00000007278	423 (aa)	-	UPI0000E43A78

Gene Model

Click here to download ENSETEG00000008963's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000008963's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000008963	SF3B4	76	92.593	ENSG00000143368	SF3B4	97	87.568	Homo_sapiens
ENSETEG00000008963	SF3B4	54	87.391	ENSAPOG00000017647	sf3b4	77	71.473	Acanthochromis_polyacanthus
ENSETEG00000008963	SF3B4	76	92.901	ENSAMEG00000010073	SF3B4	76	92.901	Ailuropoda_melanoleuca
ENSETEG00000008963	SF3B4	50	89.100	ENSAOCG00000019801	sf3b4	77	71.473	Amphiprion_ocellaris
ENSETEG00000008963	SF3B4	50	89.100	ENSAPEG00000010365	sf3b4	77	71.473	Amphiprion_percula
ENSETEG00000008963	SF3B4	54	87.391	ENSATEG00000012844	sf3b4	57	87.719	Anabas_testudineus
ENSETEG00000008963	SF3B4	62	87.452	ENSACAG00000010019	SF3B4	75	82.500	Anolis_carolinensis
ENSETEG00000008963	SF3B4	76	92.593	ENSANAG00000031025	SF3B4	76	92.593	Aotus_nancymaae
ENSETEG00000008963	SF3B4	56	86.076	ENSACLG00000014260	sf3b4	57	87.719	Astatotilapia_calliptera
ENSETEG00000008963	SF3B4	54	87.391	ENSAMXG00000008282	sf3b4	57	87.719	Astyanax_mexicanus
ENSETEG00000008963	SF3B4	76	92.901	ENSBTAG00000012495	SF3B4	76	92.901	Bos_taurus
ENSETEG00000008963	SF3B4	91	86.458	ENSBTAG00000012793	-	93	86.458	Bos_taurus
ENSETEG00000008963	SF3B4	76	75.862	ENSCJAG00000042351	SF3B4	69	76.190	Callithrix_jacchus
ENSETEG00000008963	SF3B4	76	92.593	ENSCAFG00000011617	SF3B4	76	92.593	Canis_familiaris
ENSETEG00000008963	SF3B4	76	92.593	ENSCAFG00020019775	SF3B4	76	92.593	Canis_lupus_dingo
ENSETEG00000008963	SF3B4	76	92.901	ENSCHIG00000025663	-	76	92.901	Capra_hircus
ENSETEG00000008963	SF3B4	76	92.593	ENSTSYG00000009295	SF3B4	76	92.593	Carlito_syrichta
ENSETEG00000008963	SF3B4	76	92.593	ENSCPOG00000008267	SF3B4	76	92.593	Cavia_porcellus
ENSETEG00000008963	SF3B4	76	86.420	ENSCCAG00000021751	-	69	85.802	Cebus_capucinus
ENSETEG00000008963	SF3B4	74	84.026	ENSCCAG00000019823	-	71	84.053	Cebus_capucinus
ENSETEG00000008963	SF3B4	76	92.593	ENSCATG00000033114	SF3B4	76	92.593	Cercocebus_atys
ENSETEG00000008963	SF3B4	76	92.593	ENSCLAG00000015851	SF3B4	76	92.593	Chinchilla_lanigera
ENSETEG00000008963	SF3B4	76	92.593	ENSCSAG00000018129	SF3B4	76	92.593	Chlorocebus_sabaeus
ENSETEG00000008963	SF3B4	62	87.833	ENSCPBG00000008041	SF3B4	75	83.750	Chrysemys_picta_bellii
ENSETEG00000008963	SF3B4	51	80.000	ENSCING00000002337	-	57	79.621	Ciona_intestinalis
ENSETEG00000008963	SF3B4	76	92.593	ENSCANG00000035579	SF3B4	76	92.593	Colobus_angolensis_palliatus
ENSETEG00000008963	SF3B4	76	92.593	ENSCGRG00001003590	Sf3b4	76	92.593	Cricetulus_griseus_chok1gshd
ENSETEG00000008963	SF3B4	76	92.593	ENSCGRG00000016914	Sf3b4	76	92.593	Cricetulus_griseus_crigri
ENSETEG00000008963	SF3B4	56	84.388	ENSCVAG00000005536	sf3b4	54	89.100	Cyprinodon_variegatus
ENSETEG00000008963	SF3B4	54	87.391	ENSDARG00000018574	sf3b4	57	87.719	Danio_rerio
ENSETEG00000008963	SF3B4	97	73.850	ENSDNOG00000037231	-	76	70.607	Dasypus_novemcinctus
ENSETEG00000008963	SF3B4	74	88.924	ENSDNOG00000048908	-	76	88.924	Dasypus_novemcinctus
ENSETEG00000008963	SF3B4	76	92.901	ENSDORG00000016366	Sf3b4	76	92.901	Dipodomys_ordii
ENSETEG00000008963	SF3B4	52	77.828	FBgn0015818	Spx	61	79.147	Drosophila_melanogaster
ENSETEG00000008963	SF3B4	76	92.901	ENSEASG00005001477	SF3B4	76	92.901	Equus_asinus_asinus
ENSETEG00000008963	SF3B4	76	92.901	ENSECAG00000024737	SF3B4	76	92.901	Equus_caballus
ENSETEG00000008963	SF3B4	76	92.901	ENSFCAG00000010106	SF3B4	76	92.901	Felis_catus
ENSETEG00000008963	SF3B4	76	92.593	ENSFDAG00000009286	SF3B4	76	92.593	Fukomys_damarensis
ENSETEG00000008963	SF3B4	54	86.957	ENSGMOG00000002519	sf3b4	67	87.281	Gadus_morhua
ENSETEG00000008963	SF3B4	99	80.378	ENSGALG00000013352	SF3B4	75	82.188	Gallus_gallus
ENSETEG00000008963	SF3B4	62	83.774	ENSGAFG00000010181	sf3b4	58	87.719	Gambusia_affinis
ENSETEG00000008963	SF3B4	62	87.833	ENSGAGG00000025055	SF3B4	67	83.282	Gopherus_agassizii
ENSETEG00000008963	SF3B4	76	92.593	ENSGGOG00000004761	SF3B4	76	92.593	Gorilla_gorilla
ENSETEG00000008963	SF3B4	56	86.076	ENSHBUG00000002028	sf3b4	57	87.719	Haplochromis_burtoni
ENSETEG00000008963	SF3B4	76	92.593	ENSHGLG00000012360	SF3B4	76	92.593	Heterocephalus_glaber_female
ENSETEG00000008963	SF3B4	56	90.254	ENSHGLG00100008533	SF3B4	76	82.716	Heterocephalus_glaber_male
ENSETEG00000008963	SF3B4	54	87.826	ENSIPUG00000012242	Sf3b4	57	88.158	Ictalurus_punctatus
ENSETEG00000008963	SF3B4	76	92.901	ENSSTOG00000000684	-	76	92.901	Ictidomys_tridecemlineatus
ENSETEG00000008963	SF3B4	76	80.952	ENSJJAG00000022500	Sf3b4	95	81.304	Jaculus_jaculus
ENSETEG00000008963	SF3B4	56	86.498	ENSKMAG00000008154	sf3b4	58	88.158	Kryptolebias_marmoratus
ENSETEG00000008963	SF3B4	55	87.554	ENSLBEG00000026818	sf3b4	57	88.158	Labrus_bergylta
ENSETEG00000008963	SF3B4	57	86.420	ENSLACG00000004436	SF3B4	87	78.750	Latimeria_chalumnae
ENSETEG00000008963	SF3B4	57	86.420	ENSLOCG00000009048	sf3b4	75	78.370	Lepisosteus_oculatus
ENSETEG00000008963	SF3B4	76	92.308	ENSLAFG00000008531	SF3B4	76	92.308	Loxodonta_africana
ENSETEG00000008963	SF3B4	92	63.613	ENSMFAG00000039067	-	57	72.897	Macaca_fascicularis
ENSETEG00000008963	SF3B4	76	92.593	ENSMFAG00000042395	SF3B4	76	92.593	Macaca_fascicularis
ENSETEG00000008963	SF3B4	76	92.593	ENSMMUG00000007256	SF3B4	76	92.593	Macaca_mulatta
ENSETEG00000008963	SF3B4	76	92.593	ENSMNEG00000031839	SF3B4	76	92.593	Macaca_nemestrina
ENSETEG00000008963	SF3B4	92	63.104	ENSMNEG00000031526	-	57	72.430	Macaca_nemestrina
ENSETEG00000008963	SF3B4	76	92.593	ENSMLEG00000038667	SF3B4	76	92.593	Mandrillus_leucophaeus
ENSETEG00000008963	SF3B4	56	87.342	ENSMAMG00000014692	sf3b4	57	87.719	Mastacembelus_armatus
ENSETEG00000008963	SF3B4	56	86.076	ENSMZEG00005026741	sf3b4	57	87.719	Maylandia_zebra
ENSETEG00000008963	SF3B4	99	78.960	ENSMGAG00000000653	SF3B4	75	81.875	Meleagris_gallopavo
ENSETEG00000008963	SF3B4	76	92.593	ENSMAUG00000015266	Sf3b4	76	92.593	Mesocricetus_auratus
ENSETEG00000008963	SF3B4	76	92.901	ENSMICG00000044961	SF3B4	76	92.901	Microcebus_murinus
ENSETEG00000008963	SF3B4	98	87.229	ENSMOCG00000014155	-	78	89.524	Microtus_ochrogaster
ENSETEG00000008963	SF3B4	76	92.593	ENSMOCG00000013658	-	76	92.593	Microtus_ochrogaster
ENSETEG00000008963	SF3B4	76	92.593	ENSMODG00000018767	SF3B4	76	92.593	Monodelphis_domestica
ENSETEG00000008963	SF3B4	53	87.665	ENSMALG00000006174	sf3b4	57	87.281	Monopterus_albus
ENSETEG00000008963	SF3B4	76	92.284	MGP_CAROLIEiJ_G0025365	Sf3b4	76	92.284	Mus_caroli
ENSETEG00000008963	SF3B4	76	92.593	ENSMUSG00000068856	Sf3b4	76	92.593	Mus_musculus
ENSETEG00000008963	SF3B4	76	92.593	MGP_PahariEiJ_G0026809	Sf3b4	76	92.593	Mus_pahari
ENSETEG00000008963	SF3B4	76	92.593	MGP_SPRETEiJ_G0026309	Sf3b4	76	92.593	Mus_spretus
ENSETEG00000008963	SF3B4	76	92.901	ENSMPUG00000005563	SF3B4	76	92.901	Mustela_putorius_furo
ENSETEG00000008963	SF3B4	76	92.593	ENSMLUG00000010789	SF3B4	76	92.593	Myotis_lucifugus
ENSETEG00000008963	SF3B4	76	92.284	ENSNGAG00000016337	Sf3b4	76	92.284	Nannospalax_galili
ENSETEG00000008963	SF3B4	56	86.498	ENSNBRG00000013865	sf3b4	57	88.158	Neolamprologus_brichardi
ENSETEG00000008963	SF3B4	100	68.265	ENSNLEG00000000537	-	82	78.086	Nomascus_leucogenys
ENSETEG00000008963	SF3B4	69	86.154	ENSMEUG00000003272	SF3B4	53	97.917	Notamacropus_eugenii
ENSETEG00000008963	SF3B4	76	89.506	ENSOPRG00000010808	SF3B4	77	89.506	Ochotona_princeps
ENSETEG00000008963	SF3B4	74	80.380	ENSODEG00000003597	-	79	80.380	Octodon_degus
ENSETEG00000008963	SF3B4	56	85.654	ENSONIG00000002730	sf3b4	57	87.719	Oreochromis_niloticus
ENSETEG00000008963	SF3B4	99	51.395	ENSOANG00000004768	-	50	71.028	Ornithorhynchus_anatinus
ENSETEG00000008963	SF3B4	76	92.901	ENSOCUG00000004614	SF3B4	76	92.901	Oryctolagus_cuniculus
ENSETEG00000008963	SF3B4	55	87.069	ENSORLG00000003062	sf3b4	59	87.719	Oryzias_latipes
ENSETEG00000008963	SF3B4	76	92.901	ENSOGAG00000006265	SF3B4	76	92.901	Otolemur_garnettii
ENSETEG00000008963	SF3B4	76	92.901	ENSOARG00000020718	-	76	92.901	Ovis_aries
ENSETEG00000008963	SF3B4	75	75.235	ENSOARG00000007368	-	77	72.414	Ovis_aries
ENSETEG00000008963	SF3B4	76	92.593	ENSPPAG00000040904	SF3B4	76	92.593	Pan_paniscus
ENSETEG00000008963	SF3B4	100	75.000	ENSPPAG00000030024	-	78	75.926	Pan_paniscus
ENSETEG00000008963	SF3B4	76	92.901	ENSPPRG00000007384	SF3B4	76	92.901	Panthera_pardus
ENSETEG00000008963	SF3B4	76	92.901	ENSPTIG00000014530	SF3B4	76	92.901	Panthera_tigris_altaica
ENSETEG00000008963	SF3B4	100	72.642	ENSPTRG00000049727	-	59	80.932	Pan_troglodytes
ENSETEG00000008963	SF3B4	76	92.593	ENSPTRG00000001243	SF3B4	76	92.593	Pan_troglodytes
ENSETEG00000008963	SF3B4	76	92.593	ENSPANG00000005126	SF3B4	76	92.593	Papio_anubis
ENSETEG00000008963	SF3B4	55	87.554	ENSPKIG00000020669	sf3b4	60	88.158	Paramormyrops_kingsleyae
ENSETEG00000008963	SF3B4	66	67.500	ENSPSIG00000009565	SF3B4	68	85.946	Pelodiscus_sinensis
ENSETEG00000008963	SF3B4	76	92.593	ENSPEMG00000017568	Sf3b4	76	92.593	Peromyscus_maniculatus_bairdii
ENSETEG00000008963	SF3B4	61	78.988	ENSPMAG00000007842	-	50	85.308	Petromyzon_marinus
ENSETEG00000008963	SF3B4	76	92.593	ENSPCIG00000008765	SF3B4	77	91.743	Phascolarctos_cinereus
ENSETEG00000008963	SF3B4	64	82.721	ENSPFOG00000005754	sf3b4	58	87.281	Poecilia_formosa
ENSETEG00000008963	SF3B4	64	82.051	ENSPLAG00000001401	sf3b4	63	87.281	Poecilia_latipinna
ENSETEG00000008963	SF3B4	64	82.721	ENSPREG00000011076	sf3b4	57	87.719	Poecilia_reticulata
ENSETEG00000008963	SF3B4	76	92.901	ENSPCOG00000015399	SF3B4	76	92.901	Propithecus_coquereli
ENSETEG00000008963	SF3B4	76	92.901	ENSPVAG00000014171	SF3B4	76	92.901	Pteropus_vampyrus
ENSETEG00000008963	SF3B4	56	86.076	ENSPNYG00000012700	sf3b4	57	87.719	Pundamilia_nyererei
ENSETEG00000008963	SF3B4	76	92.593	ENSRNOG00000021181	Sf3b4	76	92.593	Rattus_norvegicus
ENSETEG00000008963	SF3B4	76	92.593	ENSRBIG00000043392	SF3B4	76	92.593	Rhinopithecus_bieti
ENSETEG00000008963	SF3B4	76	92.593	ENSRROG00000029366	SF3B4	76	92.593	Rhinopithecus_roxellana
ENSETEG00000008963	SF3B4	91	65.722	ENSRROG00000028213	-	82	66.349	Rhinopithecus_roxellana
ENSETEG00000008963	SF3B4	75	72.414	ENSSBOG00000025174	-	73	72.755	Saimiri_boliviensis_boliviensis
ENSETEG00000008963	SF3B4	76	92.593	ENSSBOG00000012310	-	76	92.593	Saimiri_boliviensis_boliviensis
ENSETEG00000008963	SF3B4	76	89.198	ENSSHAG00000004043	SF3B4	76	89.198	Sarcophilus_harrisii
ENSETEG00000008963	SF3B4	56	86.920	ENSSFOG00015008864	sf3b4	56	88.158	Scleropages_formosus
ENSETEG00000008963	SF3B4	50	89.100	ENSSMAG00000006837	sf3b4	57	87.719	Scophthalmus_maximus
ENSETEG00000008963	SF3B4	54	87.826	ENSSDUG00000012064	sf3b4	57	88.158	Seriola_dumerili
ENSETEG00000008963	SF3B4	54	87.826	ENSSLDG00000014226	sf3b4	57	88.158	Seriola_lalandi_dorsalis
ENSETEG00000008963	SF3B4	70	85.714	ENSSPUG00000001028	SF3B4	57	88.596	Sphenodon_punctatus
ENSETEG00000008963	SF3B4	54	88.261	ENSSPAG00000019219	sf3b4	57	88.158	Stegastes_partitus
ENSETEG00000008963	SF3B4	78	59.940	ENSSSCG00000039440	-	79	58.951	Sus_scrofa
ENSETEG00000008963	SF3B4	76	92.593	ENSSSCG00000006665	-	76	92.593	Sus_scrofa
ENSETEG00000008963	SF3B4	56	87.288	ENSTGUG00000004470	SF3B4	90	88.158	Taeniopygia_guttata
ENSETEG00000008963	SF3B4	53	86.784	ENSTRUG00000004516	sf3b4	57	86.404	Takifugu_rubripes
ENSETEG00000008963	SF3B4	76	92.901	ENSTTRG00000005217	SF3B4	76	92.901	Tursiops_truncatus
ENSETEG00000008963	SF3B4	76	92.901	ENSUAMG00000022468	SF3B4	76	92.901	Ursus_americanus
ENSETEG00000008963	SF3B4	93	89.594	ENSUMAG00000003802	SF3B4	77	92.284	Ursus_maritimus
ENSETEG00000008963	SF3B4	74	92.628	ENSVPAG00000008152	SF3B4	76	92.628	Vicugna_pacos
ENSETEG00000008963	SF3B4	61	88.372	ENSVVUG00000022697	-	54	88.372	Vulpes_vulpes
ENSETEG00000008963	SF3B4	99	86.364	ENSVVUG00000007732	-	100	86.364	Vulpes_vulpes
ENSETEG00000008963	SF3B4	51	86.977	ENSXETG00000011038	sf3b4	53	88.500	Xenopus_tropicalis
ENSETEG00000008963	SF3B4	54	87.391	ENSXCOG00000019895	sf3b4	58	87.719	Xiphophorus_couchianus
ENSETEG00000008963	SF3B4	54	87.391	ENSXMAG00000003772	sf3b4	58	87.719	Xiphophorus_maculatus