EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000009080 (Gene tree)
Gene ID: -
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 96973 bases
Position: chrGeneScaffold_4429:565-97537
Accession: 17344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000007371	Npa1	PF11707.8	1.9e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000009086	URB1-201	6828	-	ENSETEP00000007371	2276 (aa)	-	UPI0000E41AE3

Gene Model

Click here to download ENSETEG00000009080's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000009080's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000009080	URB1	92	80.663	ENSG00000142207	URB1	92	80.663	Homo_sapiens
ENSETEG00000009080	URB1	92	51.455	ENSAPOG00000020308	urb1	92	51.455	Acanthochromis_polyacanthus
ENSETEG00000009080	URB1	92	80.000	ENSAMEG00000011998	URB1	92	80.000	Ailuropoda_melanoleuca
ENSETEG00000009080	URB1	83	54.781	ENSACIG00000003248	urb1	84	54.781	Amphilophus_citrinellus
ENSETEG00000009080	URB1	85	53.875	ENSAOCG00000010364	urb1	85	53.875	Amphiprion_ocellaris
ENSETEG00000009080	URB1	85	52.823	ENSAPEG00000010758	urb1	85	52.823	Amphiprion_percula
ENSETEG00000009080	URB1	83	55.777	ENSATEG00000011790	urb1	82	55.777	Anabas_testudineus
ENSETEG00000009080	URB1	88	66.465	ENSAPLG00000012791	URB1	91	65.010	Anas_platyrhynchos
ENSETEG00000009080	URB1	89	64.542	ENSACAG00000002817	URB1	90	61.381	Anolis_carolinensis
ENSETEG00000009080	URB1	92	80.847	ENSANAG00000024617	URB1	92	80.847	Aotus_nancymaae
ENSETEG00000009080	URB1	85	52.727	ENSACLG00000024865	urb1	85	52.727	Astatotilapia_calliptera
ENSETEG00000009080	URB1	90	52.381	ENSAMXG00000012306	urb1	90	52.381	Astyanax_mexicanus
ENSETEG00000009080	URB1	92	80.218	ENSBTAG00000012412	URB1	93	80.218	Bos_taurus
ENSETEG00000009080	URB1	92	80.479	ENSCJAG00000009118	URB1	92	80.479	Callithrix_jacchus
ENSETEG00000009080	URB1	92	80.545	ENSCAFG00000008892	URB1	92	80.545	Canis_familiaris
ENSETEG00000009080	URB1	92	80.545	ENSCAFG00020025994	-	92	80.545	Canis_lupus_dingo
ENSETEG00000009080	URB1	92	80.545	ENSCAFG00020025987	-	92	80.545	Canis_lupus_dingo
ENSETEG00000009080	URB1	92	80.581	ENSCHIG00000015645	URB1	92	80.581	Capra_hircus
ENSETEG00000009080	URB1	92	80.556	ENSTSYG00000013286	URB1	92	80.556	Carlito_syrichta
ENSETEG00000009080	URB1	90	75.960	ENSCAPG00000015589	URB1	91	75.960	Cavia_aperea
ENSETEG00000009080	URB1	92	80.295	ENSCPOG00000006748	URB1	92	80.295	Cavia_porcellus
ENSETEG00000009080	URB1	92	80.847	ENSCCAG00000021299	URB1	92	80.847	Cebus_capucinus
ENSETEG00000009080	URB1	91	82.922	ENSCATG00000042630	URB1	92	81.584	Cercocebus_atys
ENSETEG00000009080	URB1	92	79.455	ENSCLAG00000005262	URB1	92	79.455	Chinchilla_lanigera
ENSETEG00000009080	URB1	91	75.791	ENSCSAG00000009584	URB1	92	74.684	Chlorocebus_sabaeus
ENSETEG00000009080	URB1	91	65.918	ENSCPBG00000006454	URB1	91	64.312	Chrysemys_picta_bellii
ENSETEG00000009080	URB1	91	81.784	ENSCANG00000031088	URB1	92	80.479	Colobus_angolensis_palliatus
ENSETEG00000009080	URB1	91	76.200	ENSCGRG00001010616	Urb1	92	74.909	Cricetulus_griseus_chok1gshd
ENSETEG00000009080	URB1	90	76.295	ENSCGRG00000015840	Urb1	92	76.295	Cricetulus_griseus_crigri
ENSETEG00000009080	URB1	91	49.811	ENSCSEG00000012616	urb1	92	49.811	Cynoglossus_semilaevis
ENSETEG00000009080	URB1	82	53.484	ENSCVAG00000009076	urb1	94	52.622	Cyprinodon_variegatus
ENSETEG00000009080	URB1	89	61.111	ENSDARG00000060308	urb1	90	61.111	Danio_rerio
ENSETEG00000009080	URB1	82	79.492	ENSDNOG00000015586	URB1	96	79.492	Dasypus_novemcinctus
ENSETEG00000009080	URB1	92	77.636	ENSDORG00000006735	Urb1	92	77.636	Dipodomys_ordii
ENSETEG00000009080	URB1	92	81.455	ENSEASG00005007711	URB1	92	81.455	Equus_asinus_asinus
ENSETEG00000009080	URB1	92	81.455	ENSECAG00000013206	URB1	92	81.455	Equus_caballus
ENSETEG00000009080	URB1	89	56.286	ENSELUG00000020516	urb1	89	59.761	Esox_lucius
ENSETEG00000009080	URB1	92	79.455	ENSFCAG00000002177	URB1	92	79.455	Felis_catus
ENSETEG00000009080	URB1	89	63.508	ENSFALG00000004636	URB1	90	63.508	Ficedula_albicollis
ENSETEG00000009080	URB1	92	80.000	ENSFDAG00000007288	URB1	88	80.000	Fukomys_damarensis
ENSETEG00000009080	URB1	87	53.160	ENSFHEG00000000202	urb1	91	53.160	Fundulus_heteroclitus
ENSETEG00000009080	URB1	84	50.382	ENSGMOG00000001838	urb1	85	50.382	Gadus_morhua
ENSETEG00000009080	URB1	90	65.103	ENSGALG00000015887	URB1	89	65.103	Gallus_gallus
ENSETEG00000009080	URB1	90	52.099	ENSGAFG00000020694	urb1	91	52.099	Gambusia_affinis
ENSETEG00000009080	URB1	91	52.874	ENSGACG00000011703	urb1	92	52.874	Gasterosteus_aculeatus
ENSETEG00000009080	URB1	92	63.375	ENSGAGG00000022544	URB1	91	63.375	Gopherus_agassizii
ENSETEG00000009080	URB1	92	81.031	ENSGGOG00000000285	URB1	92	81.031	Gorilla_gorilla
ENSETEG00000009080	URB1	85	52.727	ENSHBUG00000001904	urb1	85	52.727	Haplochromis_burtoni
ENSETEG00000009080	URB1	92	79.450	ENSHGLG00000004907	URB1	91	79.450	Heterocephalus_glaber_female
ENSETEG00000009080	URB1	92	79.633	ENSHGLG00100010749	URB1	92	79.633	Heterocephalus_glaber_male
ENSETEG00000009080	URB1	67	50.000	ENSHCOG00000018683	urb1	94	50.775	Hippocampus_comes
ENSETEG00000009080	URB1	91	51.326	ENSIPUG00000014721	urb1	91	51.326	Ictalurus_punctatus
ENSETEG00000009080	URB1	92	82.214	ENSSTOG00000004539	URB1	92	82.214	Ictidomys_tridecemlineatus
ENSETEG00000009080	URB1	82	55.324	ENSKMAG00000006001	urb1	93	55.324	Kryptolebias_marmoratus
ENSETEG00000009080	URB1	82	53.220	ENSLBEG00000027208	urb1	86	53.220	Labrus_bergylta
ENSETEG00000009080	URB1	91	53.501	ENSLACG00000017059	URB1	90	53.501	Latimeria_chalumnae
ENSETEG00000009080	URB1	92	56.506	ENSLOCG00000009190	urb1	92	56.506	Lepisosteus_oculatus
ENSETEG00000009080	URB1	92	82.374	ENSLAFG00000010407	URB1	92	82.374	Loxodonta_africana
ENSETEG00000009080	URB1	91	82.353	ENSMFAG00000034391	URB1	89	81.031	Macaca_fascicularis
ENSETEG00000009080	URB1	91	81.973	ENSMMUG00000010295	URB1	92	80.663	Macaca_mulatta
ENSETEG00000009080	URB1	91	82.163	ENSMNEG00000032981	URB1	92	80.663	Macaca_nemestrina
ENSETEG00000009080	URB1	91	82.543	ENSMLEG00000041435	URB1	92	81.481	Mandrillus_leucophaeus
ENSETEG00000009080	URB1	83	52.399	ENSMAMG00000011238	urb1	83	52.399	Mastacembelus_armatus
ENSETEG00000009080	URB1	82	54.333	ENSMZEG00005011862	urb1	85	54.333	Maylandia_zebra
ENSETEG00000009080	URB1	89	65.669	ENSMGAG00000014512	URB1	90	65.669	Meleagris_gallopavo
ENSETEG00000009080	URB1	89	88.136	ENSMAUG00000010516	Urb1	91	88.136	Mesocricetus_auratus
ENSETEG00000009080	URB1	92	80.000	ENSMICG00000016424	URB1	92	80.000	Microcebus_murinus
ENSETEG00000009080	URB1	92	75.636	ENSMOCG00000012613	Urb1	92	75.636	Microtus_ochrogaster
ENSETEG00000009080	URB1	90	68.927	ENSMODG00000021076	URB1	90	68.927	Monodelphis_domestica
ENSETEG00000009080	URB1	84	52.207	ENSMALG00000017411	urb1	85	52.207	Monopterus_albus
ENSETEG00000009080	URB1	92	74.000	MGP_CAROLIEiJ_G0020948	Urb1	92	74.000	Mus_caroli
ENSETEG00000009080	URB1	92	74.545	ENSMUSG00000039929	Urb1	92	74.545	Mus_musculus
ENSETEG00000009080	URB1	92	74.545	MGP_PahariEiJ_G0016653	Urb1	92	74.545	Mus_pahari
ENSETEG00000009080	URB1	92	74.000	MGP_SPRETEiJ_G0021854	Urb1	92	74.000	Mus_spretus
ENSETEG00000009080	URB1	92	80.727	ENSMPUG00000001123	URB1	92	80.727	Mustela_putorius_furo
ENSETEG00000009080	URB1	92	75.926	ENSNGAG00000001905	Urb1	92	75.926	Nannospalax_galili
ENSETEG00000009080	URB1	67	51.648	ENSNBRG00000001049	urb1	81	51.648	Neolamprologus_brichardi
ENSETEG00000009080	URB1	92	80.847	ENSNLEG00000026872	URB1	92	80.847	Nomascus_leucogenys
ENSETEG00000009080	URB1	81	80.000	ENSMEUG00000010828	URB1	82	75.862	Notamacropus_eugenii
ENSETEG00000009080	URB1	92	71.455	ENSOPRG00000013482	URB1	92	71.455	Ochotona_princeps
ENSETEG00000009080	URB1	92	79.273	ENSODEG00000002587	URB1	92	79.273	Octodon_degus
ENSETEG00000009080	URB1	91	52.909	ENSONIG00000005599	urb1	92	52.909	Oreochromis_niloticus
ENSETEG00000009080	URB1	91	81.481	ENSOCUG00000009381	URB1	91	81.481	Oryctolagus_cuniculus
ENSETEG00000009080	URB1	84	52.602	ENSORLG00000003429	urb1	91	52.602	Oryzias_latipes
ENSETEG00000009080	URB1	84	52.602	ENSORLG00020013785	urb1	91	54.157	Oryzias_latipes_hni
ENSETEG00000009080	URB1	84	52.075	ENSORLG00015019421	urb1	85	52.533	Oryzias_latipes_hsok
ENSETEG00000009080	URB1	74	52.569	ENSOMEG00000002094	urb1	95	52.569	Oryzias_melastigma
ENSETEG00000009080	URB1	92	79.455	ENSOGAG00000017140	URB1	92	79.455	Otolemur_garnettii
ENSETEG00000009080	URB1	87	79.928	ENSOARG00000013679	URB1	91	79.928	Ovis_aries
ENSETEG00000009080	URB1	92	81.031	ENSPPAG00000003423	URB1	92	81.031	Pan_paniscus
ENSETEG00000009080	URB1	92	79.455	ENSPPRG00000023131	URB1	92	79.455	Panthera_pardus
ENSETEG00000009080	URB1	86	80.157	ENSPTIG00000016125	URB1	91	80.157	Panthera_tigris_altaica
ENSETEG00000009080	URB1	92	80.847	ENSPTRG00000013852	URB1	92	80.847	Pan_troglodytes
ENSETEG00000009080	URB1	91	82.163	ENSPANG00000021964	URB1	92	80.847	Papio_anubis
ENSETEG00000009080	URB1	89	58.513	ENSPKIG00000003683	urb1	88	58.513	Paramormyrops_kingsleyae
ENSETEG00000009080	URB1	92	77.532	ENSPEMG00000021205	Urb1	91	77.532	Peromyscus_maniculatus_bairdii
ENSETEG00000009080	URB1	75	43.931	ENSPMAG00000009733	URB1	93	44.220	Petromyzon_marinus
ENSETEG00000009080	URB1	91	70.245	ENSPCIG00000016350	URB1	90	70.245	Phascolarctos_cinereus
ENSETEG00000009080	URB1	88	54.664	ENSPLAG00000004371	urb1	91	54.664	Poecilia_latipinna
ENSETEG00000009080	URB1	91	52.622	ENSPMEG00000006634	urb1	91	52.622	Poecilia_mexicana
ENSETEG00000009080	URB1	90	52.060	ENSPREG00000013453	urb1	90	52.060	Poecilia_reticulata
ENSETEG00000009080	URB1	92	81.031	ENSPPYG00000011359	URB1	92	81.031	Pongo_abelii
ENSETEG00000009080	URB1	89	74.820	ENSPCAG00000007430	URB1	89	74.820	Procavia_capensis
ENSETEG00000009080	URB1	92	79.636	ENSPCOG00000022695	URB1	92	79.636	Propithecus_coquereli
ENSETEG00000009080	URB1	92	79.091	ENSPVAG00000000889	URB1	92	79.091	Pteropus_vampyrus
ENSETEG00000009080	URB1	84	51.718	ENSPNYG00000010589	urb1	85	51.718	Pundamilia_nyererei
ENSETEG00000009080	URB1	90	52.399	ENSPNAG00000019324	urb1	91	52.399	Pygocentrus_nattereri
ENSETEG00000009080	URB1	92	75.691	ENSRNOG00000002080	Urb1	92	75.691	Rattus_norvegicus
ENSETEG00000009080	URB1	91	82.163	ENSRBIG00000033122	URB1	92	80.847	Rhinopithecus_bieti
ENSETEG00000009080	URB1	91	81.973	ENSRROG00000040237	URB1	92	80.663	Rhinopithecus_roxellana
ENSETEG00000009080	URB1	92	80.182	ENSSBOG00000027672	URB1	92	80.182	Saimiri_boliviensis_boliviensis
ENSETEG00000009080	URB1	91	69.231	ENSSHAG00000005140	URB1	91	69.231	Sarcophilus_harrisii
ENSETEG00000009080	URB1	84	56.522	ENSSFOG00015000339	urb1	91	55.844	Scleropages_formosus
ENSETEG00000009080	URB1	85	54.833	ENSSMAG00000003782	urb1	85	54.833	Scophthalmus_maximus
ENSETEG00000009080	URB1	92	52.527	ENSSDUG00000012313	urb1	92	52.527	Seriola_dumerili
ENSETEG00000009080	URB1	92	52.347	ENSSLDG00000023179	urb1	92	52.347	Seriola_lalandi_dorsalis
ENSETEG00000009080	URB1	92	61.331	ENSSPUG00000012447	URB1	91	61.331	Sphenodon_punctatus
ENSETEG00000009080	URB1	92	52.182	ENSSPAG00000006325	urb1	93	52.000	Stegastes_partitus
ENSETEG00000009080	URB1	92	78.324	ENSSSCG00000032024	URB1	92	78.324	Sus_scrofa
ENSETEG00000009080	URB1	70	63.029	ENSTGUG00000013442	URB1	95	63.029	Taeniopygia_guttata
ENSETEG00000009080	URB1	84	51.565	ENSTRUG00000009372	urb1	85	51.565	Takifugu_rubripes
ENSETEG00000009080	URB1	84	52.490	ENSTNIG00000016277	urb1	85	52.490	Tetraodon_nigroviridis
ENSETEG00000009080	URB1	73	73.000	ENSTBEG00000010044	URB1	73	73.000	Tupaia_belangeri
ENSETEG00000009080	URB1	80	73.956	ENSTTRG00000007712	URB1	81	73.956	Tursiops_truncatus
ENSETEG00000009080	URB1	92	80.545	ENSUAMG00000012231	URB1	92	80.545	Ursus_americanus
ENSETEG00000009080	URB1	86	81.909	ENSUMAG00000017419	URB1	92	82.056	Ursus_maritimus
ENSETEG00000009080	URB1	64	81.048	ENSVPAG00000001164	URB1	63	81.048	Vicugna_pacos
ENSETEG00000009080	URB1	92	80.182	ENSVVUG00000000551	URB1	92	80.182	Vulpes_vulpes
ENSETEG00000009080	URB1	91	60.109	ENSXETG00000009895	urb1	91	60.109	Xenopus_tropicalis
ENSETEG00000009080	URB1	90	51.718	ENSXCOG00000005500	urb1	91	51.718	Xiphophorus_couchianus
ENSETEG00000009080	URB1	84	51.908	ENSXMAG00000007253	urb1	91	51.908	Xiphophorus_maculatus