EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000009183 (Gene tree)
Gene ID: -
Gene Symbol: TRUB1
Alias: PUS4
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 58019 bases
Position: chrGeneScaffold_6248:85322-143340
Accession: 16060
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000007457	TruB_N	PF01509.18	5.8e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000009182	TRUB1-201	1068	-	ENSETEP00000007457	355 (aa)	-	UPI0000E43D62

Gene Model

Click here to download ENSETEG00000009183's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000009183's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000009183	TRUB1	81	76.961	ENSG00000165832	TRUB1	81	75.980	Homo_sapiens
ENSETEG00000009183	TRUB1	50	66.176	ENSAPOG00000020565	trub1	67	64.539	Acanthochromis_polyacanthus
ENSETEG00000009183	TRUB1	66	86.577	ENSAMEG00000014931	TRUB1	81	78.431	Ailuropoda_melanoleuca
ENSETEG00000009183	TRUB1	51	65.116	ENSACIG00000003060	trub1	60	65.116	Amphilophus_citrinellus
ENSETEG00000009183	TRUB1	50	65.441	ENSAOCG00000017188	trub1	65	64.964	Amphiprion_ocellaris
ENSETEG00000009183	TRUB1	51	65.116	ENSAPEG00000015209	trub1	70	65.116	Amphiprion_percula
ENSETEG00000009183	TRUB1	51	66.176	ENSATEG00000023291	trub1	65	66.176	Anabas_testudineus
ENSETEG00000009183	TRUB1	60	68.966	ENSAPLG00000006808	TRUB1	74	71.739	Anas_platyrhynchos
ENSETEG00000009183	TRUB1	57	68.345	ENSACAG00000009282	TRUB1	73	68.345	Anolis_carolinensis
ENSETEG00000009183	TRUB1	81	77.941	ENSANAG00000022870	TRUB1	81	76.961	Aotus_nancymaae
ENSETEG00000009183	TRUB1	55	64.234	ENSACLG00000000823	trub1	69	64.234	Astatotilapia_calliptera
ENSETEG00000009183	TRUB1	61	66.912	ENSAMXG00000015845	trub1	73	66.912	Astyanax_mexicanus
ENSETEG00000009183	TRUB1	77	81.053	ENSBTAG00000012955	TRUB1	81	78.049	Bos_taurus
ENSETEG00000009183	TRUB1	81	77.451	ENSCJAG00000047815	TRUB1	81	76.471	Callithrix_jacchus
ENSETEG00000009183	TRUB1	81	77.941	ENSCAFG00000011688	TRUB1	81	78.922	Canis_familiaris
ENSETEG00000009183	TRUB1	81	80.392	ENSCAFG00020013237	TRUB1	81	79.412	Canis_lupus_dingo
ENSETEG00000009183	TRUB1	65	86.577	ENSCHIG00000020884	TRUB1	81	77.941	Capra_hircus
ENSETEG00000009183	TRUB1	81	75.122	ENSTSYG00000000446	TRUB1	64	88.028	Carlito_syrichta
ENSETEG00000009183	TRUB1	52	86.408	ENSCAPG00000017088	TRUB1	79	86.408	Cavia_aperea
ENSETEG00000009183	TRUB1	57	70.588	ENSCPOG00000040236	-	58	86.620	Cavia_porcellus
ENSETEG00000009183	TRUB1	57	67.157	ENSCPOG00000030129	-	55	85.915	Cavia_porcellus
ENSETEG00000009183	TRUB1	81	77.451	ENSCCAG00000028842	TRUB1	81	76.471	Cebus_capucinus
ENSETEG00000009183	TRUB1	81	76.961	ENSCATG00000033431	TRUB1	81	77.941	Cercocebus_atys
ENSETEG00000009183	TRUB1	57	73.529	ENSCLAG00000008664	TRUB1	58	86.620	Chinchilla_lanigera
ENSETEG00000009183	TRUB1	81	76.961	ENSCSAG00000004891	TRUB1	81	77.941	Chlorocebus_sabaeus
ENSETEG00000009183	TRUB1	73	69.274	ENSCHOG00000011931	TRUB1	72	68.715	Choloepus_hoffmanni
ENSETEG00000009183	TRUB1	60	73.973	ENSCPBG00000003051	TRUB1	72	76.224	Chrysemys_picta_bellii
ENSETEG00000009183	TRUB1	81	76.961	ENSCANG00000029445	TRUB1	81	77.941	Colobus_angolensis_palliatus
ENSETEG00000009183	TRUB1	59	80.952	ENSCGRG00001010322	-	62	78.261	Cricetulus_griseus_chok1gshd
ENSETEG00000009183	TRUB1	53	88.462	ENSCGRG00001016772	-	63	87.736	Cricetulus_griseus_chok1gshd
ENSETEG00000009183	TRUB1	60	90.769	ENSCGRG00000010806	Trub1	69	88.028	Cricetulus_griseus_crigri
ENSETEG00000009183	TRUB1	50	65.441	ENSCSEG00000011261	trub1	58	64.964	Cynoglossus_semilaevis
ENSETEG00000009183	TRUB1	50	66.176	ENSCVAG00000008791	trub1	57	66.176	Cyprinodon_variegatus
ENSETEG00000009183	TRUB1	58	67.153	ENSDARG00000053805	trub1	76	69.608	Danio_rerio
ENSETEG00000009183	TRUB1	80	73.494	ENSDNOG00000001069	TRUB1	80	73.494	Dasypus_novemcinctus
ENSETEG00000009183	TRUB1	81	72.549	ENSDORG00000010431	Trub1	65	88.028	Dipodomys_ordii
ENSETEG00000009183	TRUB1	65	85.235	ENSEASG00005014739	TRUB1	81	78.431	Equus_asinus_asinus
ENSETEG00000009183	TRUB1	65	85.235	ENSECAG00000007177	TRUB1	81	78.431	Equus_caballus
ENSETEG00000009183	TRUB1	74	71.038	ENSEEUG00000013993	TRUB1	56	86.325	Erinaceus_europaeus
ENSETEG00000009183	TRUB1	50	67.883	ENSELUG00000000502	trub1	63	67.883	Esox_lucius
ENSETEG00000009183	TRUB1	66	86.577	ENSFCAG00000031927	TRUB1	81	77.941	Felis_catus
ENSETEG00000009183	TRUB1	56	74.874	ENSFDAG00000008140	TRUB1	80	72.864	Fukomys_damarensis
ENSETEG00000009183	TRUB1	59	64.286	ENSFHEG00000004016	trub1	61	64.286	Fundulus_heteroclitus
ENSETEG00000009183	TRUB1	58	70.290	ENSGALG00000009091	TRUB1	72	70.290	Gallus_gallus
ENSETEG00000009183	TRUB1	50	62.319	ENSGAFG00000009193	trub1	62	60.870	Gambusia_affinis
ENSETEG00000009183	TRUB1	58	75.000	ENSGAGG00000009758	TRUB1	60	73.944	Gopherus_agassizii
ENSETEG00000009183	TRUB1	81	77.941	ENSGGOG00000004583	TRUB1	81	76.961	Gorilla_gorilla
ENSETEG00000009183	TRUB1	59	60.526	ENSHBUG00000016787	trub1	69	64.234	Haplochromis_burtoni
ENSETEG00000009183	TRUB1	81	70.098	ENSHGLG00000015314	TRUB1	64	85.915	Heterocephalus_glaber_female
ENSETEG00000009183	TRUB1	57	68.137	ENSHGLG00100009183	TRUB1	60	85.915	Heterocephalus_glaber_male
ENSETEG00000009183	TRUB1	54	62.000	ENSHCOG00000017877	trub1	65	65.693	Hippocampus_comes
ENSETEG00000009183	TRUB1	56	66.176	ENSIPUG00000017559	trub1	70	66.176	Ictalurus_punctatus
ENSETEG00000009183	TRUB1	65	85.906	ENSSTOG00000003641	TRUB1	79	72.059	Ictidomys_tridecemlineatus
ENSETEG00000009183	TRUB1	65	84.564	ENSJJAG00000011800	Trub1	65	87.324	Jaculus_jaculus
ENSETEG00000009183	TRUB1	59	65.116	ENSKMAG00000006232	trub1	65	65.116	Kryptolebias_marmoratus
ENSETEG00000009183	TRUB1	65	59.036	ENSLBEG00000026722	trub1	70	65.248	Labrus_bergylta
ENSETEG00000009183	TRUB1	60	68.667	ENSLACG00000014885	TRUB1	67	72.464	Latimeria_chalumnae
ENSETEG00000009183	TRUB1	59	65.333	ENSLOCG00000012979	trub1	67	68.841	Lepisosteus_oculatus
ENSETEG00000009183	TRUB1	81	87.255	ENSLAFG00000015452	TRUB1	81	86.765	Loxodonta_africana
ENSETEG00000009183	TRUB1	81	76.961	ENSMFAG00000031767	TRUB1	81	77.941	Macaca_fascicularis
ENSETEG00000009183	TRUB1	81	76.961	ENSMMUG00000001902	TRUB1	81	77.941	Macaca_mulatta
ENSETEG00000009183	TRUB1	81	71.084	ENSMNEG00000044646	TRUB1	80	72.059	Macaca_nemestrina
ENSETEG00000009183	TRUB1	81	78.922	ENSMLEG00000042655	TRUB1	81	77.941	Mandrillus_leucophaeus
ENSETEG00000009183	TRUB1	55	64.234	ENSMZEG00005024095	trub1	69	64.234	Maylandia_zebra
ENSETEG00000009183	TRUB1	61	66.897	ENSMGAG00000011135	TRUB1	71	69.565	Meleagris_gallopavo
ENSETEG00000009183	TRUB1	60	89.922	ENSMAUG00000011101	Trub1	67	87.234	Mesocricetus_auratus
ENSETEG00000009183	TRUB1	80	78.431	ENSMICG00000016324	TRUB1	80	77.451	Microcebus_murinus
ENSETEG00000009183	TRUB1	60	89.231	ENSMOCG00000017759	Trub1	68	86.620	Microtus_ochrogaster
ENSETEG00000009183	TRUB1	62	85.294	ENSMODG00000009676	TRUB1	62	83.099	Monodelphis_domestica
ENSETEG00000009183	TRUB1	61	89.552	MGP_CAROLIEiJ_G0023100	Trub1	67	87.324	Mus_caroli
ENSETEG00000009183	TRUB1	61	88.806	ENSMUSG00000025086	Trub1	67	86.620	Mus_musculus
ENSETEG00000009183	TRUB1	65	85.811	MGP_PahariEiJ_G0014588	Trub1	67	88.028	Mus_pahari
ENSETEG00000009183	TRUB1	61	88.806	MGP_SPRETEiJ_G0024021	Trub1	67	86.620	Mus_spretus
ENSETEG00000009183	TRUB1	66	87.248	ENSMPUG00000003556	TRUB1	81	78.922	Mustela_putorius_furo
ENSETEG00000009183	TRUB1	65	83.893	ENSMLUG00000017686	TRUB1	80	72.289	Myotis_lucifugus
ENSETEG00000009183	TRUB1	81	73.529	ENSNGAG00000018682	Trub1	65	87.324	Nannospalax_galili
ENSETEG00000009183	TRUB1	51	65.116	ENSNBRG00000023393	trub1	64	65.116	Neolamprologus_brichardi
ENSETEG00000009183	TRUB1	77	76.316	ENSNLEG00000016345	TRUB1	81	76.961	Nomascus_leucogenys
ENSETEG00000009183	TRUB1	65	81.879	ENSOPRG00000009371	TRUB1	65	85.211	Ochotona_princeps
ENSETEG00000009183	TRUB1	81	71.084	ENSODEG00000010854	TRUB1	64	85.211	Octodon_degus
ENSETEG00000009183	TRUB1	51	65.116	ENSONIG00000007249	trub1	65	65.116	Oreochromis_niloticus
ENSETEG00000009183	TRUB1	58	76.812	ENSOANG00000001556	TRUB1	68	76.812	Ornithorhynchus_anatinus
ENSETEG00000009183	TRUB1	65	79.195	ENSOCUG00000009456	TRUB1	65	81.690	Oryctolagus_cuniculus
ENSETEG00000009183	TRUB1	56	66.912	ENSORLG00000029719	trub1	69	66.912	Oryzias_latipes
ENSETEG00000009183	TRUB1	56	66.912	ENSORLG00020016767	trub1	68	66.912	Oryzias_latipes_hni
ENSETEG00000009183	TRUB1	56	66.176	ENSORLG00015014728	trub1	69	66.176	Oryzias_latipes_hsok
ENSETEG00000009183	TRUB1	60	60.256	ENSOMEG00000014556	trub1	68	66.176	Oryzias_melastigma
ENSETEG00000009183	TRUB1	81	77.451	ENSOGAG00000015895	TRUB1	81	76.471	Otolemur_garnettii
ENSETEG00000009183	TRUB1	64	84.459	ENSOARG00000015591	TRUB1	80	75.598	Ovis_aries
ENSETEG00000009183	TRUB1	81	77.451	ENSPPAG00000043645	TRUB1	81	76.471	Pan_paniscus
ENSETEG00000009183	TRUB1	66	85.906	ENSPPRG00000007096	TRUB1	81	77.451	Panthera_pardus
ENSETEG00000009183	TRUB1	66	86.577	ENSPTIG00000006378	TRUB1	81	77.941	Panthera_tigris_altaica
ENSETEG00000009183	TRUB1	81	77.451	ENSPTRG00000002964	TRUB1	81	76.471	Pan_troglodytes
ENSETEG00000009183	TRUB1	81	76.471	ENSPANG00000020712	TRUB1	81	77.451	Papio_anubis
ENSETEG00000009183	TRUB1	58	73.188	ENSPSIG00000012877	TRUB1	71	73.188	Pelodiscus_sinensis
ENSETEG00000009183	TRUB1	53	60.959	ENSPMGG00000000075	trub1	64	63.504	Periophthalmus_magnuspinnatus
ENSETEG00000009183	TRUB1	65	83.784	ENSPEMG00000011156	Trub1	66	85.915	Peromyscus_maniculatus_bairdii
ENSETEG00000009183	TRUB1	62	85.294	ENSPCIG00000009729	TRUB1	64	83.099	Phascolarctos_cinereus
ENSETEG00000009183	TRUB1	50	64.234	ENSPFOG00000009950	trub1	66	64.234	Poecilia_formosa
ENSETEG00000009183	TRUB1	50	64.234	ENSPLAG00000013855	trub1	63	64.234	Poecilia_latipinna
ENSETEG00000009183	TRUB1	50	64.234	ENSPMEG00000009064	trub1	65	64.234	Poecilia_mexicana
ENSETEG00000009183	TRUB1	59	64.286	ENSPREG00000003343	trub1	65	64.964	Poecilia_reticulata
ENSETEG00000009183	TRUB1	77	77.895	ENSPPYG00000002676	TRUB1	81	76.471	Pongo_abelii
ENSETEG00000009183	TRUB1	81	87.255	ENSPCAG00000008427	TRUB1	81	86.765	Procavia_capensis
ENSETEG00000009183	TRUB1	80	74.074	ENSPCOG00000024360	TRUB1	78	75.000	Propithecus_coquereli
ENSETEG00000009183	TRUB1	57	77.451	ENSPVAG00000007575	TRUB1	75	78.431	Pteropus_vampyrus
ENSETEG00000009183	TRUB1	55	64.234	ENSPNYG00000018614	trub1	69	64.234	Pundamilia_nyererei
ENSETEG00000009183	TRUB1	57	51.515	ENSPNAG00000006881	trub1	63	51.515	Pygocentrus_nattereri
ENSETEG00000009183	TRUB1	65	84.564	ENSRNOG00000017321	Trub1	66	86.620	Rattus_norvegicus
ENSETEG00000009183	TRUB1	74	75.138	ENSRBIG00000033423	TRUB1	80	74.033	Rhinopithecus_bieti
ENSETEG00000009183	TRUB1	81	77.941	ENSRROG00000033902	TRUB1	81	76.961	Rhinopithecus_roxellana
ENSETEG00000009183	TRUB1	81	77.451	ENSSBOG00000024237	TRUB1	81	76.471	Saimiri_boliviensis_boliviensis
ENSETEG00000009183	TRUB1	53	83.654	ENSSHAG00000009346	TRUB1	63	83.654	Sarcophilus_harrisii
ENSETEG00000009183	TRUB1	50	67.500	ENSSFOG00015022124	trub1	60	67.500	Scleropages_formosus
ENSETEG00000009183	TRUB1	63	58.683	ENSSMAG00000001020	trub1	68	67.153	Scophthalmus_maximus
ENSETEG00000009183	TRUB1	58	76.087	ENSSPUG00000001642	TRUB1	71	76.087	Sphenodon_punctatus
ENSETEG00000009183	TRUB1	56	66.423	ENSSPAG00000001217	trub1	70	66.423	Stegastes_partitus
ENSETEG00000009183	TRUB1	81	76.961	ENSSSCG00000010653	TRUB1	81	75.980	Sus_scrofa
ENSETEG00000009183	TRUB1	57	71.324	ENSTGUG00000010971	TRUB1	73	71.014	Taeniopygia_guttata
ENSETEG00000009183	TRUB1	53	87.379	ENSTBEG00000002880	TRUB1	75	87.379	Tupaia_belangeri
ENSETEG00000009183	TRUB1	66	87.248	ENSUAMG00000024876	TRUB1	81	78.431	Ursus_americanus
ENSETEG00000009183	TRUB1	64	88.811	ENSUMAG00000002411	TRUB1	80	75.980	Ursus_maritimus
ENSETEG00000009183	TRUB1	81	80.392	ENSVPAG00000005507	TRUB1	81	79.412	Vicugna_pacos
ENSETEG00000009183	TRUB1	81	77.941	ENSVVUG00000010085	TRUB1	67	78.431	Vulpes_vulpes
ENSETEG00000009183	TRUB1	56	66.429	ENSXETG00000023828	trub1	72	66.429	Xenopus_tropicalis
ENSETEG00000009183	TRUB1	54	60.927	ENSXCOG00000017847	trub1	63	63.504	Xiphophorus_couchianus
ENSETEG00000009183	TRUB1	50	63.504	ENSXMAG00000014701	trub1	65	63.504	Xiphophorus_maculatus