EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000009188 (Gene tree)
Gene ID: -
Gene Symbol: SF3B1
Alias: Hsh155|PRPF10|Prp10|SAP155|SF3b155
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 20447 bases
Position: chrscaffold_293573:62808-83254
Accession: 10768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000007463	SF3b1	PF08920.10	2.6e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000009189	SF3B1-201	3231	-	ENSETEP00000007463	1077 (aa)	-	UPI0000E40344

Gene Model

Click here to download ENSETEG00000009188's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000009188's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000009188	SF3B1	100	99.351	ENSG00000115524	SF3B1	90	99.225	Homo_sapiens
ENSETEG00000009188	SF3B1	100	92.301	ENSAPOG00000011894	sf3b1	87	92.301	Acanthochromis_polyacanthus
ENSETEG00000009188	SF3B1	100	99.259	ENSAMEG00000013809	SF3B1	83	99.259	Ailuropoda_melanoleuca
ENSETEG00000009188	SF3B1	100	91.897	ENSACIG00000020910	sf3b1	80	91.713	Amphilophus_citrinellus
ENSETEG00000009188	SF3B1	100	92.301	ENSAOCG00000004478	sf3b1	83	92.301	Amphiprion_ocellaris
ENSETEG00000009188	SF3B1	100	92.301	ENSAPEG00000012937	sf3b1	83	92.301	Amphiprion_percula
ENSETEG00000009188	SF3B1	100	92.477	ENSATEG00000020435	sf3b1	83	92.477	Anabas_testudineus
ENSETEG00000009188	SF3B1	100	98.701	ENSAPLG00000003993	SF3B1	83	98.701	Anas_platyrhynchos
ENSETEG00000009188	SF3B1	100	98.330	ENSACAG00000009612	SF3B1	83	98.330	Anolis_carolinensis
ENSETEG00000009188	SF3B1	100	99.351	ENSANAG00000021577	SF3B1	83	99.351	Aotus_nancymaae
ENSETEG00000009188	SF3B1	100	91.468	ENSACLG00000023470	sf3b1	83	91.284	Astatotilapia_calliptera
ENSETEG00000009188	SF3B1	100	93.119	ENSAMXG00000002219	sf3b1	83	92.936	Astyanax_mexicanus
ENSETEG00000009188	SF3B1	100	99.258	ENSBTAG00000008915	SF3B1	83	99.258	Bos_taurus
ENSETEG00000009188	SF3B1	99	64.896	WBGene00011605	sftb-1	82	64.986	Caenorhabditis_elegans
ENSETEG00000009188	SF3B1	100	99.351	ENSCJAG00000003902	SF3B1	83	99.351	Callithrix_jacchus
ENSETEG00000009188	SF3B1	100	99.351	ENSCAFG00000010826	SF3B1	83	99.351	Canis_familiaris
ENSETEG00000009188	SF3B1	100	99.351	ENSCAFG00020004750	SF3B1	83	99.351	Canis_lupus_dingo
ENSETEG00000009188	SF3B1	100	99.258	ENSCHIG00000015226	SF3B1	83	99.258	Capra_hircus
ENSETEG00000009188	SF3B1	100	99.258	ENSTSYG00000009214	SF3B1	83	99.258	Carlito_syrichta
ENSETEG00000009188	SF3B1	100	99.351	ENSCAPG00000006547	SF3B1	83	99.351	Cavia_aperea
ENSETEG00000009188	SF3B1	100	99.351	ENSCPOG00000009353	SF3B1	83	99.351	Cavia_porcellus
ENSETEG00000009188	SF3B1	100	99.351	ENSCCAG00000020506	SF3B1	83	99.351	Cebus_capucinus
ENSETEG00000009188	SF3B1	100	99.351	ENSCATG00000035735	SF3B1	83	99.351	Cercocebus_atys
ENSETEG00000009188	SF3B1	100	99.351	ENSCLAG00000014767	SF3B1	83	99.351	Chinchilla_lanigera
ENSETEG00000009188	SF3B1	100	99.351	ENSCSAG00000011505	SF3B1	83	99.351	Chlorocebus_sabaeus
ENSETEG00000009188	SF3B1	78	98.182	ENSCHOG00000009860	SF3B1	64	98.148	Choloepus_hoffmanni
ENSETEG00000009188	SF3B1	100	98.516	ENSCPBG00000021902	SF3B1	96	98.516	Chrysemys_picta_bellii
ENSETEG00000009188	SF3B1	83	77.839	ENSCING00000002558	-	99	78.547	Ciona_intestinalis
ENSETEG00000009188	SF3B1	99	78.904	ENSCSAVG00000002559	-	83	78.428	Ciona_savignyi
ENSETEG00000009188	SF3B1	100	99.351	ENSCANG00000029415	SF3B1	83	99.351	Colobus_angolensis_palliatus
ENSETEG00000009188	SF3B1	100	99.351	ENSCGRG00001016990	Sf3b1	83	99.351	Cricetulus_griseus_chok1gshd
ENSETEG00000009188	SF3B1	100	99.351	ENSCGRG00000005301	Sf3b1	83	99.351	Cricetulus_griseus_crigri
ENSETEG00000009188	SF3B1	100	88.214	ENSCSEG00000003860	sf3b1	82	88.029	Cynoglossus_semilaevis
ENSETEG00000009188	SF3B1	100	92.209	ENSCVAG00000003680	sf3b1	86	92.209	Cyprinodon_variegatus
ENSETEG00000009188	SF3B1	100	92.392	ENSDARG00000056138	sf3b1	83	92.301	Danio_rerio
ENSETEG00000009188	SF3B1	100	99.259	ENSDNOG00000011754	SF3B1	83	99.259	Dasypus_novemcinctus
ENSETEG00000009188	SF3B1	100	96.104	ENSDORG00000002399	Sf3b1	83	96.104	Dipodomys_ordii
ENSETEG00000009188	SF3B1	100	74.691	FBgn0031266	Sf3b1	83	74.691	Drosophila_melanogaster
ENSETEG00000009188	SF3B1	100	85.833	ENSEBUG00000004325	sf3b1	81	89.209	Eptatretus_burgeri
ENSETEG00000009188	SF3B1	100	99.258	ENSEASG00005020159	SF3B1	81	99.258	Equus_asinus_asinus
ENSETEG00000009188	SF3B1	100	99.258	ENSECAG00000021657	SF3B1	81	99.258	Equus_caballus
ENSETEG00000009188	SF3B1	91	98.828	ENSEEUG00000000836	SF3B1	70	98.828	Erinaceus_europaeus
ENSETEG00000009188	SF3B1	100	91.811	ENSELUG00000005977	sf3b1	81	91.629	Esox_lucius
ENSETEG00000009188	SF3B1	100	99.351	ENSFCAG00000005038	SF3B1	83	99.351	Felis_catus
ENSETEG00000009188	SF3B1	100	98.701	ENSFALG00000004281	SF3B1	82	98.701	Ficedula_albicollis
ENSETEG00000009188	SF3B1	100	99.351	ENSFDAG00000017510	SF3B1	83	99.351	Fukomys_damarensis
ENSETEG00000009188	SF3B1	100	91.567	ENSFHEG00000014333	sf3b1	83	91.567	Fundulus_heteroclitus
ENSETEG00000009188	SF3B1	100	92.463	ENSGMOG00000006773	sf3b1	83	92.463	Gadus_morhua
ENSETEG00000009188	SF3B1	100	98.701	ENSGALG00000008038	SF3B1	83	98.701	Gallus_gallus
ENSETEG00000009188	SF3B1	99	92.315	ENSGAFG00000000704	sf3b1	83	92.315	Gambusia_affinis
ENSETEG00000009188	SF3B1	100	92.357	ENSGACG00000008839	sf3b1	83	92.357	Gasterosteus_aculeatus
ENSETEG00000009188	SF3B1	100	98.516	ENSGAGG00000017478	SF3B1	82	98.516	Gopherus_agassizii
ENSETEG00000009188	SF3B1	100	91.759	ENSGGOG00000009264	SF3B1	83	92.764	Gorilla_gorilla
ENSETEG00000009188	SF3B1	100	91.468	ENSHBUG00000007705	sf3b1	83	91.284	Haplochromis_burtoni
ENSETEG00000009188	SF3B1	100	99.351	ENSHGLG00000008285	-	83	99.351	Heterocephalus_glaber_female
ENSETEG00000009188	SF3B1	100	99.072	ENSHGLG00100005535	-	84	99.072	Heterocephalus_glaber_male
ENSETEG00000009188	SF3B1	100	91.621	ENSHCOG00000016775	sf3b1	83	91.439	Hippocampus_comes
ENSETEG00000009188	SF3B1	100	92.936	ENSIPUG00000013171	sf3b1	83	92.936	Ictalurus_punctatus
ENSETEG00000009188	SF3B1	100	99.351	ENSSTOG00000011034	SF3B1	83	99.351	Ictidomys_tridecemlineatus
ENSETEG00000009188	SF3B1	99	99.348	ENSJJAG00000010903	Sf3b1	83	99.348	Jaculus_jaculus
ENSETEG00000009188	SF3B1	100	91.773	ENSKMAG00000004009	sf3b1	83	91.682	Kryptolebias_marmoratus
ENSETEG00000009188	SF3B1	100	92.435	ENSLBEG00000022208	sf3b1	83	92.251	Labrus_bergylta
ENSETEG00000009188	SF3B1	100	91.185	ENSLACG00000014832	SF3B1	83	91.185	Latimeria_chalumnae
ENSETEG00000009188	SF3B1	100	93.681	ENSLOCG00000003899	sf3b1	83	93.498	Lepisosteus_oculatus
ENSETEG00000009188	SF3B1	100	99.351	ENSLAFG00000001956	SF3B1	83	99.351	Loxodonta_africana
ENSETEG00000009188	SF3B1	100	99.351	ENSMMUG00000022430	SF3B1	82	99.351	Macaca_mulatta
ENSETEG00000009188	SF3B1	100	99.351	ENSMNEG00000042333	SF3B1	83	99.351	Macaca_nemestrina
ENSETEG00000009188	SF3B1	94	91.339	ENSMLEG00000026141	SF3B1	80	92.004	Mandrillus_leucophaeus
ENSETEG00000009188	SF3B1	100	92.477	ENSMAMG00000010241	sf3b1	83	92.477	Mastacembelus_armatus
ENSETEG00000009188	SF3B1	100	91.468	ENSMZEG00005021254	sf3b1	83	91.284	Maylandia_zebra
ENSETEG00000009188	SF3B1	100	97.959	ENSMGAG00000007017	SF3B1	83	97.959	Meleagris_gallopavo
ENSETEG00000009188	SF3B1	100	94.249	ENSMAUG00000009071	Sf3b1	82	94.249	Mesocricetus_auratus
ENSETEG00000009188	SF3B1	100	99.258	ENSMICG00000013879	SF3B1	83	99.258	Microcebus_murinus
ENSETEG00000009188	SF3B1	100	94.341	ENSMOCG00000000455	Sf3b1	82	94.341	Microtus_ochrogaster
ENSETEG00000009188	SF3B1	100	92.528	ENSMMOG00000000475	sf3b1	99	92.528	Mola_mola
ENSETEG00000009188	SF3B1	100	98.609	ENSMODG00000012275	SF3B1	83	98.609	Monodelphis_domestica
ENSETEG00000009188	SF3B1	100	92.385	ENSMALG00000017211	sf3b1	83	92.385	Monopterus_albus
ENSETEG00000009188	SF3B1	100	99.351	MGP_CAROLIEiJ_G0014141	Sf3b1	83	99.351	Mus_caroli
ENSETEG00000009188	SF3B1	100	99.351	ENSMUSG00000025982	Sf3b1	83	99.351	Mus_musculus
ENSETEG00000009188	SF3B1	100	99.351	MGP_SPRETEiJ_G0014947	Sf3b1	83	99.351	Mus_spretus
ENSETEG00000009188	SF3B1	100	99.351	ENSMPUG00000007799	SF3B1	83	99.351	Mustela_putorius_furo
ENSETEG00000009188	SF3B1	100	97.866	ENSMLUG00000000840	SF3B1	83	97.866	Myotis_lucifugus
ENSETEG00000009188	SF3B1	100	99.351	ENSNGAG00000021884	-	83	99.351	Nannospalax_galili
ENSETEG00000009188	SF3B1	100	87.109	ENSNBRG00000015816	sf3b1	82	87.109	Neolamprologus_brichardi
ENSETEG00000009188	SF3B1	100	99.351	ENSNLEG00000006861	SF3B1	83	99.351	Nomascus_leucogenys
ENSETEG00000009188	SF3B1	69	100.000	ENSMEUG00000015848	-	54	100.000	Notamacropus_eugenii
ENSETEG00000009188	SF3B1	98	86.919	ENSOPRG00000008596	SF3B1	81	86.919	Ochotona_princeps
ENSETEG00000009188	SF3B1	100	99.351	ENSODEG00000011153	-	83	99.351	Octodon_degus
ENSETEG00000009188	SF3B1	100	91.468	ENSONIG00000013758	sf3b1	83	91.284	Oreochromis_niloticus
ENSETEG00000009188	SF3B1	81	98.041	ENSOCUG00000012722	-	77	98.041	Oryctolagus_cuniculus
ENSETEG00000009188	SF3B1	100	92.202	ENSORLG00000020219	sf3b1	83	92.202	Oryzias_latipes
ENSETEG00000009188	SF3B1	100	92.202	ENSORLG00020001746	sf3b1	83	92.202	Oryzias_latipes_hni
ENSETEG00000009188	SF3B1	76	90.482	ENSORLG00015001759	sf3b1	97	90.482	Oryzias_latipes_hsok
ENSETEG00000009188	SF3B1	100	92.209	ENSOMEG00000019231	sf3b1	83	92.209	Oryzias_melastigma
ENSETEG00000009188	SF3B1	58	82.665	ENSOGAG00000000267	-	98	82.665	Otolemur_garnettii
ENSETEG00000009188	SF3B1	100	99.258	ENSOARG00000015374	SF3B1	83	99.258	Ovis_aries
ENSETEG00000009188	SF3B1	100	99.351	ENSPPAG00000035007	SF3B1	83	99.351	Pan_paniscus
ENSETEG00000009188	SF3B1	100	99.351	ENSPPRG00000009090	SF3B1	83	99.351	Panthera_pardus
ENSETEG00000009188	SF3B1	100	99.351	ENSPTIG00000021557	SF3B1	83	99.351	Panthera_tigris_altaica
ENSETEG00000009188	SF3B1	100	89.094	ENSPTRG00000012771	SF3B1	82	89.094	Pan_troglodytes
ENSETEG00000009188	SF3B1	100	99.351	ENSPANG00000013417	SF3B1	83	99.351	Papio_anubis
ENSETEG00000009188	SF3B1	100	94.118	ENSPKIG00000000784	sf3b1	83	93.934	Paramormyrops_kingsleyae
ENSETEG00000009188	SF3B1	100	97.032	ENSPSIG00000017222	SF3B1	82	97.032	Pelodiscus_sinensis
ENSETEG00000009188	SF3B1	100	92.903	ENSPMGG00000004330	sf3b1	90	92.719	Periophthalmus_magnuspinnatus
ENSETEG00000009188	SF3B1	100	99.351	ENSPEMG00000010699	Sf3b1	83	99.351	Peromyscus_maniculatus_bairdii
ENSETEG00000009188	SF3B1	100	89.093	ENSPMAG00000001311	sf3b1	83	89.276	Petromyzon_marinus
ENSETEG00000009188	SF3B1	100	98.516	ENSPCIG00000010642	SF3B1	83	98.516	Phascolarctos_cinereus
ENSETEG00000009188	SF3B1	100	92.216	ENSPFOG00000000073	sf3b1	83	92.216	Poecilia_formosa
ENSETEG00000009188	SF3B1	100	92.301	ENSPLAG00000002293	sf3b1	83	92.301	Poecilia_latipinna
ENSETEG00000009188	SF3B1	100	92.301	ENSPMEG00000000446	sf3b1	81	92.301	Poecilia_mexicana
ENSETEG00000009188	SF3B1	100	92.301	ENSPREG00000019652	sf3b1	83	92.301	Poecilia_reticulata
ENSETEG00000009188	SF3B1	100	97.841	ENSPPYG00000013044	SF3B1	80	97.841	Pongo_abelii
ENSETEG00000009188	SF3B1	100	99.351	ENSPCAG00000009292	SF3B1	83	99.351	Procavia_capensis
ENSETEG00000009188	SF3B1	100	99.258	ENSPCOG00000024074	SF3B1	83	99.258	Propithecus_coquereli
ENSETEG00000009188	SF3B1	100	99.351	ENSPVAG00000008302	SF3B1	83	99.351	Pteropus_vampyrus
ENSETEG00000009188	SF3B1	100	91.468	ENSPNYG00000014939	sf3b1	83	91.284	Pundamilia_nyererei
ENSETEG00000009188	SF3B1	100	92.844	ENSPNAG00000008288	sf3b1	83	92.844	Pygocentrus_nattereri
ENSETEG00000009188	SF3B1	100	99.351	ENSRNOG00000013516	Sf3b1	83	99.351	Rattus_norvegicus
ENSETEG00000009188	SF3B1	100	95.083	ENSRBIG00000026096	SF3B1	83	95.083	Rhinopithecus_bieti
ENSETEG00000009188	SF3B1	100	99.351	ENSRROG00000031308	SF3B1	83	99.351	Rhinopithecus_roxellana
ENSETEG00000009188	SF3B1	100	99.351	ENSSBOG00000020080	SF3B1	83	99.351	Saimiri_boliviensis_boliviensis
ENSETEG00000009188	SF3B1	100	98.609	ENSSHAG00000017564	SF3B1	83	98.609	Sarcophilus_harrisii
ENSETEG00000009188	SF3B1	100	93.492	ENSSFOG00015021535	sf3b1	83	93.676	Scleropages_formosus
ENSETEG00000009188	SF3B1	100	91.613	ENSSMAG00000013977	sf3b1	82	91.431	Scophthalmus_maximus
ENSETEG00000009188	SF3B1	100	92.202	ENSSDUG00000017422	sf3b1	83	92.202	Seriola_dumerili
ENSETEG00000009188	SF3B1	100	92.110	ENSSLDG00000019495	sf3b1	83	92.110	Seriola_lalandi_dorsalis
ENSETEG00000009188	SF3B1	72	99.363	ENSSARG00000007016	SF3B1	59	99.363	Sorex_araneus
ENSETEG00000009188	SF3B1	100	98.330	ENSSPUG00000000410	SF3B1	83	98.330	Sphenodon_punctatus
ENSETEG00000009188	SF3B1	100	92.385	ENSSPAG00000010451	sf3b1	82	92.385	Stegastes_partitus
ENSETEG00000009188	SF3B1	100	99.351	ENSSSCG00000016075	SF3B1	98	99.351	Sus_scrofa
ENSETEG00000009188	SF3B1	100	98.609	ENSTGUG00000010553	SF3B1	83	98.609	Taeniopygia_guttata
ENSETEG00000009188	SF3B1	100	92.202	ENSTRUG00000015534	sf3b1	83	92.018	Takifugu_rubripes
ENSETEG00000009188	SF3B1	96	99.219	ENSTBEG00000008714	SF3B1	84	99.219	Tupaia_belangeri
ENSETEG00000009188	SF3B1	90	91.434	ENSTTRG00000003414	SF3B1	75	91.434	Tursiops_truncatus
ENSETEG00000009188	SF3B1	93	95.017	ENSUAMG00000018506	SF3B1	94	97.482	Ursus_americanus
ENSETEG00000009188	SF3B1	100	99.351	ENSUMAG00000020945	SF3B1	83	99.351	Ursus_maritimus
ENSETEG00000009188	SF3B1	100	89.518	ENSVPAG00000005798	SF3B1	83	89.518	Vicugna_pacos
ENSETEG00000009188	SF3B1	100	99.351	ENSVVUG00000025948	SF3B1	78	99.351	Vulpes_vulpes
ENSETEG00000009188	SF3B1	100	95.640	ENSXETG00000013339	sf3b1	83	95.640	Xenopus_tropicalis
ENSETEG00000009188	SF3B1	100	87.985	ENSXCOG00000018086	sf3b1	82	87.856	Xiphophorus_couchianus
ENSETEG00000009188	SF3B1	100	92.209	ENSXMAG00000007369	sf3b1	84	92.209	Xiphophorus_maculatus