EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSETEG00000009194 (Gene tree)
Gene ID: -
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 10828 bases
Position: chrscaffold_288387:5209-16036
Accession: 101649592
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000007465	RRM_1	PF00076.22	2.2e-38	1	3
ENSETEP00000007465	RRM_1	PF00076.22	2.2e-38	2	3
ENSETEP00000007465	RRM_1	PF00076.22	2.2e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000009192	RBM47-201	1788	-	ENSETEP00000007465	595 (aa)	XP_004703209	UPI0000E400CC

Gene Model

Click here to download ENSETEG00000009194's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000009194's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSETEG00000009194	RBM47	52	54.516	ENSETEG00000020109	SYNCRIP	60	54.194
ENSETEG00000009194	RBM47	50	74.000	ENSETEG00000014902	RBM46	56	74.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000009194	RBM47	100	93.478	ENSG00000163694	RBM47	100	96.774	Homo_sapiens
ENSETEG00000009194	RBM47	100	77.537	ENSAPOG00000011062	rbm47	93	82.682	Acanthochromis_polyacanthus
ENSETEG00000009194	RBM47	100	92.833	ENSAMEG00000009672	RBM47	100	93.167	Ailuropoda_melanoleuca
ENSETEG00000009194	RBM47	100	76.872	ENSACIG00000011531	rbm47	97	77.241	Amphilophus_citrinellus
ENSETEG00000009194	RBM47	100	77.870	ENSAOCG00000022245	rbm47	93	82.682	Amphiprion_ocellaris
ENSETEG00000009194	RBM47	100	77.667	ENSAPEG00000018304	rbm47	93	82.682	Amphiprion_percula
ENSETEG00000009194	RBM47	100	76.384	ENSATEG00000018400	rbm47	94	77.414	Anabas_testudineus
ENSETEG00000009194	RBM47	100	87.270	ENSAPLG00000013974	RBM47	97	87.780	Anas_platyrhynchos
ENSETEG00000009194	RBM47	100	85.548	ENSACAG00000011833	RBM47	96	87.392	Anolis_carolinensis
ENSETEG00000009194	RBM47	100	94.649	ENSANAG00000029440	RBM47	100	93.478	Aotus_nancymaae
ENSETEG00000009194	RBM47	100	76.509	ENSACLG00000016902	rbm47	100	79.487	Astatotilapia_calliptera
ENSETEG00000009194	RBM47	100	75.693	ENSAMXG00000021794	rbm47	95	77.281	Astyanax_mexicanus
ENSETEG00000009194	RBM47	100	95.310	ENSBTAG00000002356	RBM47	100	95.310	Bos_taurus
ENSETEG00000009194	RBM47	100	94.324	ENSCJAG00000019385	RBM47	100	93.489	Callithrix_jacchus
ENSETEG00000009194	RBM47	96	92.683	ENSCAFG00000015898	RBM47	96	92.894	Canis_familiaris
ENSETEG00000009194	RBM47	83	94.130	ENSCAFG00020010558	RBM47	90	94.203	Canis_lupus_dingo
ENSETEG00000009194	RBM47	100	95.310	ENSCHIG00000026214	RBM47	100	95.310	Capra_hircus
ENSETEG00000009194	RBM47	90	84.146	ENSTSYG00000033612	RBM47	93	89.381	Carlito_syrichta
ENSETEG00000009194	RBM47	100	86.767	ENSCAPG00000008426	RBM47	100	87.102	Cavia_aperea
ENSETEG00000009194	RBM47	100	93.300	ENSCPOG00000014100	RBM47	100	93.635	Cavia_porcellus
ENSETEG00000009194	RBM47	100	94.658	ENSCCAG00000030129	-	100	93.155	Cebus_capucinus
ENSETEG00000009194	RBM47	99	64.716	ENSCCAG00000024397	-	99	63.940	Cebus_capucinus
ENSETEG00000009194	RBM47	100	94.631	ENSCATG00000042064	RBM47	100	94.631	Cercocebus_atys
ENSETEG00000009194	RBM47	100	92.630	ENSCLAG00000001684	RBM47	100	93.467	Chinchilla_lanigera
ENSETEG00000009194	RBM47	100	93.645	ENSCSAG00000017060	RBM47	100	93.478	Chlorocebus_sabaeus
ENSETEG00000009194	RBM47	88	91.250	ENSCHOG00000011731	RBM47	88	88.616	Choloepus_hoffmanni
ENSETEG00000009194	RBM47	100	89.667	ENSCPBG00000013831	RBM47	97	90.411	Chrysemys_picta_bellii
ENSETEG00000009194	RBM47	100	94.631	ENSCANG00000019997	RBM47	100	94.631	Colobus_angolensis_palliatus
ENSETEG00000009194	RBM47	100	64.204	ENSCGRG00001020102	-	100	70.638	Cricetulus_griseus_chok1gshd
ENSETEG00000009194	RBM47	100	92.154	ENSCGRG00001000623	-	100	91.319	Cricetulus_griseus_chok1gshd
ENSETEG00000009194	RBM47	100	91.319	ENSCGRG00000007762	-	100	92.405	Cricetulus_griseus_crigri
ENSETEG00000009194	RBM47	100	63.875	ENSCGRG00000014760	-	97	71.330	Cricetulus_griseus_crigri
ENSETEG00000009194	RBM47	100	74.457	ENSCSEG00000004545	rbm47	97	74.742	Cynoglossus_semilaevis
ENSETEG00000009194	RBM47	100	75.585	ENSCVAG00000020144	rbm47	93	83.473	Cyprinodon_variegatus
ENSETEG00000009194	RBM47	100	75.777	ENSDARG00000061985	rbm47	95	78.201	Danio_rerio
ENSETEG00000009194	RBM47	100	94.631	ENSDNOG00000046854	RBM47	100	94.631	Dasypus_novemcinctus
ENSETEG00000009194	RBM47	100	94.314	ENSDORG00000010144	Rbm47	100	94.314	Dipodomys_ordii
ENSETEG00000009194	RBM47	95	58.834	ENSEBUG00000011912	rbm47	95	60.276	Eptatretus_burgeri
ENSETEG00000009194	RBM47	100	95.134	ENSEASG00005008443	RBM47	100	95.134	Equus_asinus_asinus
ENSETEG00000009194	RBM47	100	95.134	ENSECAG00000004400	RBM47	100	95.134	Equus_caballus
ENSETEG00000009194	RBM47	75	93.506	ENSEEUG00000001194	RBM47	75	93.506	Erinaceus_europaeus
ENSETEG00000009194	RBM47	99	75.926	ENSELUG00000006148	rbm47	93	84.254	Esox_lucius
ENSETEG00000009194	RBM47	100	94.966	ENSFCAG00000012399	RBM47	100	94.966	Felis_catus
ENSETEG00000009194	RBM47	100	90.955	ENSFALG00000002861	RBM47	97	91.050	Ficedula_albicollis
ENSETEG00000009194	RBM47	100	91.625	ENSFDAG00000016326	RBM47	97	92.414	Fukomys_damarensis
ENSETEG00000009194	RBM47	100	76.962	ENSFHEG00000007938	rbm47	97	76.027	Fundulus_heteroclitus
ENSETEG00000009194	RBM47	100	73.948	ENSGMOG00000014802	rbm47	94	76.166	Gadus_morhua
ENSETEG00000009194	RBM47	63	91.270	ENSGALG00000014267	RBM47	95	91.160	Gallus_gallus
ENSETEG00000009194	RBM47	63	83.113	ENSGAFG00000020571	rbm47	94	82.682	Gambusia_affinis
ENSETEG00000009194	RBM47	100	73.864	ENSGACG00000016223	rbm47	93	81.564	Gasterosteus_aculeatus
ENSETEG00000009194	RBM47	100	90.000	ENSGAGG00000020051	RBM47	97	90.753	Gopherus_agassizii
ENSETEG00000009194	RBM47	100	94.631	ENSGGOG00000001367	RBM47	100	94.631	Gorilla_gorilla
ENSETEG00000009194	RBM47	100	76.585	ENSHBUG00000003520	rbm47	100	79.487	Haplochromis_burtoni
ENSETEG00000009194	RBM47	85	84.921	ENSHGLG00000016914	RBM47	89	95.745	Heterocephalus_glaber_female
ENSETEG00000009194	RBM47	100	91.779	ENSHGLG00100014028	-	97	93.276	Heterocephalus_glaber_male
ENSETEG00000009194	RBM47	100	82.718	ENSHGLG00100003071	-	97	83.074	Heterocephalus_glaber_male
ENSETEG00000009194	RBM47	99	76.000	ENSHCOG00000002074	rbm47	93	82.402	Hippocampus_comes
ENSETEG00000009194	RBM47	100	77.258	ENSIPUG00000004743	rbm47	97	78.087	Ictalurus_punctatus
ENSETEG00000009194	RBM47	100	93.155	ENSSTOG00000004727	RBM47	100	93.823	Ictidomys_tridecemlineatus
ENSETEG00000009194	RBM47	100	91.667	ENSJJAG00000013823	Rbm47	97	93.632	Jaculus_jaculus
ENSETEG00000009194	RBM47	100	77.907	ENSKMAG00000000084	rbm47	100	77.612	Kryptolebias_marmoratus
ENSETEG00000009194	RBM47	100	76.744	ENSLBEG00000008436	rbm47	100	75.333	Labrus_bergylta
ENSETEG00000009194	RBM47	100	84.641	ENSLACG00000007196	RBM47	100	84.641	Latimeria_chalumnae
ENSETEG00000009194	RBM47	100	81.333	ENSLOCG00000012966	rbm47	93	80.756	Lepisosteus_oculatus
ENSETEG00000009194	RBM47	100	95.302	ENSLAFG00000011998	RBM47	100	94.799	Loxodonta_africana
ENSETEG00000009194	RBM47	100	94.631	ENSMFAG00000037967	RBM47	100	94.631	Macaca_fascicularis
ENSETEG00000009194	RBM47	100	93.645	ENSMMUG00000012036	RBM47	100	96.373	Macaca_mulatta
ENSETEG00000009194	RBM47	100	94.799	ENSMNEG00000040774	RBM47	100	94.799	Macaca_nemestrina
ENSETEG00000009194	RBM47	100	97.778	ENSMLEG00000041432	RBM47	100	97.778	Mandrillus_leucophaeus
ENSETEG00000009194	RBM47	100	76.509	ENSMAMG00000019143	rbm47	100	76.156	Mastacembelus_armatus
ENSETEG00000009194	RBM47	100	76.509	ENSMZEG00005023659	rbm47	100	75.693	Maylandia_zebra
ENSETEG00000009194	RBM47	100	90.167	ENSMGAG00000012226	RBM47	97	90.411	Meleagris_gallopavo
ENSETEG00000009194	RBM47	100	92.295	ENSMAUG00000006493	Rbm47	100	92.797	Mesocricetus_auratus
ENSETEG00000009194	RBM47	100	87.899	ENSMICG00000026417	RBM47	100	88.908	Microcebus_murinus
ENSETEG00000009194	RBM47	100	92.630	ENSMOCG00000021170	Rbm47	100	92.797	Microtus_ochrogaster
ENSETEG00000009194	RBM47	100	76.059	ENSMMOG00000007260	rbm47	95	77.108	Mola_mola
ENSETEG00000009194	RBM47	100	80.336	ENSMODG00000020561	-	100	80.168	Monodelphis_domestica
ENSETEG00000009194	RBM47	51	82.315	ENSMODG00000015426	-	97	79.808	Monodelphis_domestica
ENSETEG00000009194	RBM47	100	90.940	ENSMODG00000007003	RBM47	100	90.268	Monodelphis_domestica
ENSETEG00000009194	RBM47	100	77.129	ENSMALG00000005167	rbm47	94	82.682	Monopterus_albus
ENSETEG00000009194	RBM47	100	92.450	MGP_CAROLIEiJ_G0027258	Rbm47	100	92.450	Mus_caroli
ENSETEG00000009194	RBM47	100	92.785	ENSMUSG00000070780	Rbm47	100	92.785	Mus_musculus
ENSETEG00000009194	RBM47	100	92.785	MGP_PahariEiJ_G0017040	Rbm47	100	92.785	Mus_pahari
ENSETEG00000009194	RBM47	100	92.282	MGP_SPRETEiJ_G0028253	Rbm47	100	92.282	Mus_spretus
ENSETEG00000009194	RBM47	100	95.980	ENSMPUG00000006177	RBM47	94	95.980	Mustela_putorius_furo
ENSETEG00000009194	RBM47	100	91.611	ENSMLUG00000000889	RBM47	97	93.092	Myotis_lucifugus
ENSETEG00000009194	RBM47	100	92.642	ENSNGAG00000003325	Rbm47	97	93.460	Nannospalax_galili
ENSETEG00000009194	RBM47	100	76.710	ENSNBRG00000015092	rbm47	100	75.896	Neolamprologus_brichardi
ENSETEG00000009194	RBM47	100	93.311	ENSNLEG00000017151	RBM47	100	93.144	Nomascus_leucogenys
ENSETEG00000009194	RBM47	72	86.079	ENSMEUG00000009516	-	99	85.383	Notamacropus_eugenii
ENSETEG00000009194	RBM47	75	95.082	ENSOPRG00000016507	-	71	92.105	Ochotona_princeps
ENSETEG00000009194	RBM47	100	92.295	ENSODEG00000004873	RBM47	100	93.300	Octodon_degus
ENSETEG00000009194	RBM47	100	75.566	ENSONIG00000009061	rbm47	94	76.936	Oreochromis_niloticus
ENSETEG00000009194	RBM47	100	86.047	ENSOANG00000008978	RBM47	96	88.640	Ornithorhynchus_anatinus
ENSETEG00000009194	RBM47	100	94.305	ENSOCUG00000012034	RBM47	100	94.305	Oryctolagus_cuniculus
ENSETEG00000009194	RBM47	100	76.628	ENSORLG00000005847	rbm47	94	82.402	Oryzias_latipes
ENSETEG00000009194	RBM47	100	76.795	ENSORLG00020005154	rbm47	94	82.402	Oryzias_latipes_hni
ENSETEG00000009194	RBM47	100	77.129	ENSORLG00015000066	rbm47	94	82.682	Oryzias_latipes_hsok
ENSETEG00000009194	RBM47	100	78.130	ENSOMEG00000010730	rbm47	100	76.294	Oryzias_melastigma
ENSETEG00000009194	RBM47	100	85.067	ENSOGAG00000025193	-	100	85.906	Otolemur_garnettii
ENSETEG00000009194	RBM47	100	95.477	ENSOGAG00000029367	-	100	95.477	Otolemur_garnettii
ENSETEG00000009194	RBM47	100	86.600	ENSOARG00000012711	RBM47	100	85.403	Ovis_aries
ENSETEG00000009194	RBM47	100	94.463	ENSPPAG00000029763	RBM47	100	94.463	Pan_paniscus
ENSETEG00000009194	RBM47	100	90.604	ENSPPRG00000012873	RBM47	100	94.180	Panthera_pardus
ENSETEG00000009194	RBM47	85	91.519	ENSPTIG00000017046	RBM47	100	91.519	Panthera_tigris_altaica
ENSETEG00000009194	RBM47	100	94.631	ENSPTRG00000016006	RBM47	100	94.631	Pan_troglodytes
ENSETEG00000009194	RBM47	100	94.631	ENSPANG00000005980	RBM47	100	94.631	Papio_anubis
ENSETEG00000009194	RBM47	86	85.833	ENSPKIG00000013431	RBM47	92	84.167	Paramormyrops_kingsleyae
ENSETEG00000009194	RBM47	97	76.420	ENSPKIG00000005037	rbm47	96	75.559	Paramormyrops_kingsleyae
ENSETEG00000009194	RBM47	89	90.414	ENSPSIG00000017516	RBM47	97	89.474	Pelodiscus_sinensis
ENSETEG00000009194	RBM47	100	75.626	ENSPMGG00000018540	rbm47	100	74.958	Periophthalmus_magnuspinnatus
ENSETEG00000009194	RBM47	100	92.475	ENSPEMG00000011088	Rbm47	100	92.475	Peromyscus_maniculatus_bairdii
ENSETEG00000009194	RBM47	100	76.337	ENSPFOG00000007997	rbm47	94	77.931	Poecilia_formosa
ENSETEG00000009194	RBM47	100	75.890	ENSPLAG00000002072	rbm47	97	82.633	Poecilia_latipinna
ENSETEG00000009194	RBM47	100	78.571	ENSPMEG00000017492	rbm47	93	82.913	Poecilia_mexicana
ENSETEG00000009194	RBM47	100	76.299	ENSPREG00000008456	rbm47	97	82.913	Poecilia_reticulata
ENSETEG00000009194	RBM47	98	81.513	ENSPPYG00000014688	RBM47	99	80.815	Pongo_abelii
ENSETEG00000009194	RBM47	81	95.522	ENSPCAG00000011879	RBM47	81	95.522	Procavia_capensis
ENSETEG00000009194	RBM47	100	89.916	ENSPCOG00000023451	RBM47	100	90.420	Propithecus_coquereli
ENSETEG00000009194	RBM47	100	92.617	ENSPVAG00000003812	RBM47	100	93.456	Pteropus_vampyrus
ENSETEG00000009194	RBM47	100	76.299	ENSPNYG00000022868	rbm47	100	75.649	Pundamilia_nyererei
ENSETEG00000009194	RBM47	100	75.856	ENSPNAG00000007940	rbm47	95	77.702	Pygocentrus_nattereri
ENSETEG00000009194	RBM47	100	92.617	ENSRNOG00000002408	Rbm47	100	92.617	Rattus_norvegicus
ENSETEG00000009194	RBM47	100	94.799	ENSRBIG00000039601	RBM47	100	94.799	Rhinopithecus_bieti
ENSETEG00000009194	RBM47	100	94.799	ENSRROG00000044696	RBM47	100	94.799	Rhinopithecus_roxellana
ENSETEG00000009194	RBM47	100	90.604	ENSSBOG00000028475	RBM47	100	93.429	Saimiri_boliviensis_boliviensis
ENSETEG00000009194	RBM47	100	90.604	ENSSHAG00000017576	RBM47	100	90.436	Sarcophilus_harrisii
ENSETEG00000009194	RBM47	100	72.414	ENSSFOG00015012445	rbm47	95	73.702	Scleropages_formosus
ENSETEG00000009194	RBM47	97	75.945	ENSSFOG00015024101	RBM47	97	75.430	Scleropages_formosus
ENSETEG00000009194	RBM47	100	74.188	ENSSMAG00000009744	rbm47	94	80.447	Scophthalmus_maximus
ENSETEG00000009194	RBM47	100	78.333	ENSSDUG00000022684	rbm47	97	78.103	Seriola_dumerili
ENSETEG00000009194	RBM47	100	78.798	ENSSLDG00000003109	rbm47	100	76.795	Seriola_lalandi_dorsalis
ENSETEG00000009194	RBM47	84	95.302	ENSSARG00000001735	RBM47	81	96.729	Sorex_araneus
ENSETEG00000009194	RBM47	100	87.145	ENSSPUG00000007515	RBM47	100	87.831	Sphenodon_punctatus
ENSETEG00000009194	RBM47	100	78.702	ENSSPAG00000001257	rbm47	93	83.520	Stegastes_partitus
ENSETEG00000009194	RBM47	100	95.812	ENSSSCG00000008796	RBM47	100	95.812	Sus_scrofa
ENSETEG00000009194	RBM47	100	89.950	ENSTGUG00000008705	RBM47	97	90.189	Taeniopygia_guttata
ENSETEG00000009194	RBM47	100	75.960	ENSTRUG00000014050	rbm47	99	75.129	Takifugu_rubripes
ENSETEG00000009194	RBM47	100	76.020	ENSTNIG00000006127	rbm47	94	76.166	Tetraodon_nigroviridis
ENSETEG00000009194	RBM47	77	90.000	ENSTBEG00000001607	RBM47	76	91.250	Tupaia_belangeri
ENSETEG00000009194	RBM47	100	94.472	ENSTTRG00000002839	RBM47	100	94.472	Tursiops_truncatus
ENSETEG00000009194	RBM47	100	95.142	ENSUAMG00000021346	RBM47	100	95.142	Ursus_americanus
ENSETEG00000009194	RBM47	56	95.812	ENSVPAG00000000641	-	57	95.812	Vicugna_pacos
ENSETEG00000009194	RBM47	96	93.206	ENSVVUG00000014774	RBM47	96	93.241	Vulpes_vulpes
ENSETEG00000009194	RBM47	100	84.899	ENSXETG00000012802	rbm47	97	86.034	Xenopus_tropicalis
ENSETEG00000009194	RBM47	88	82.850	ENSXCOG00000000780	rbm47	97	82.633	Xiphophorus_couchianus
ENSETEG00000009194	RBM47	100	77.076	ENSXMAG00000009874	rbm47	93	82.633	Xiphophorus_maculatus