EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSETEG00000009485 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 335395 bases
Position: chrGeneScaffold_4610:9054-344448
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000007701	RRM_1	PF00076.22	1.8e-22	1	2
ENSETEP00000007701	RRM_1	PF00076.22	1.8e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000009485	-	1305	-	ENSETEP00000007701	435 (aa)	-	UPI0000E43E48

Gene Model

Click here to download ENSETEG00000009485's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000009485's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSETEG00000009485	-	59	59.542	ENSETEG00000012135	RBMS1	68	59.542

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000009485	-	86	95.833	ENSG00000144642	RBMS3	86	95.833	Homo_sapiens
ENSETEG00000009485	-	81	59.326	ENSAPOG00000007266	rbms3	83	59.672	Acanthochromis_polyacanthus
ENSETEG00000009485	-	80	70.286	ENSAPOG00000003432	-	87	83.333	Acanthochromis_polyacanthus
ENSETEG00000009485	-	69	75.497	ENSAMEG00000005947	RBMS3	99	75.497	Ailuropoda_melanoleuca
ENSETEG00000009485	-	61	80.524	ENSACIG00000006987	-	73	80.524	Amphilophus_citrinellus
ENSETEG00000009485	-	81	55.650	ENSACIG00000021113	RBMS3	88	55.650	Amphilophus_citrinellus
ENSETEG00000009485	-	80	70.286	ENSAOCG00000024104	-	87	83.333	Amphiprion_ocellaris
ENSETEG00000009485	-	81	64.407	ENSAOCG00000021274	rbms3	79	64.407	Amphiprion_ocellaris
ENSETEG00000009485	-	86	83.333	ENSAPEG00000009481	-	86	83.333	Amphiprion_percula
ENSETEG00000009485	-	61	75.000	ENSAPEG00000016299	rbms3	70	75.000	Amphiprion_percula
ENSETEG00000009485	-	81	64.972	ENSATEG00000024295	rbms3	80	64.972	Anabas_testudineus
ENSETEG00000009485	-	80	70.000	ENSATEG00000008433	-	87	83.333	Anabas_testudineus
ENSETEG00000009485	-	86	87.500	ENSAPLG00000012270	RBMS3	87	87.500	Anas_platyrhynchos
ENSETEG00000009485	-	86	83.333	ENSACAG00000028664	RBMS3	86	83.333	Anolis_carolinensis
ENSETEG00000009485	-	86	95.833	ENSANAG00000021899	RBMS3	86	95.833	Aotus_nancymaae
ENSETEG00000009485	-	80	70.571	ENSACLG00000008976	-	82	83.333	Astatotilapia_calliptera
ENSETEG00000009485	-	81	64.407	ENSACLG00000018506	rbms3	87	64.407	Astatotilapia_calliptera
ENSETEG00000009485	-	80	69.143	ENSAMXG00000020388	rbms3	86	83.333	Astyanax_mexicanus
ENSETEG00000009485	-	99	67.742	ENSBTAG00000044062	RBMS3	99	67.742	Bos_taurus
ENSETEG00000009485	-	99	68.894	ENSCJAG00000004312	RBMS3	99	68.894	Callithrix_jacchus
ENSETEG00000009485	-	99	68.894	ENSCAFG00000005464	RBMS3	99	68.894	Canis_familiaris
ENSETEG00000009485	-	99	68.894	ENSCAFG00020024980	RBMS3	99	68.894	Canis_lupus_dingo
ENSETEG00000009485	-	99	67.742	ENSCHIG00000009144	RBMS3	99	67.742	Capra_hircus
ENSETEG00000009485	-	76	77.108	ENSTSYG00000002615	RBMS3	99	77.108	Carlito_syrichta
ENSETEG00000009485	-	66	98.788	ENSCAPG00000017783	RBMS3	67	98.788	Cavia_aperea
ENSETEG00000009485	-	86	95.833	ENSCPOG00000006457	RBMS3	87	95.833	Cavia_porcellus
ENSETEG00000009485	-	86	95.833	ENSCCAG00000008671	RBMS3	86	95.833	Cebus_capucinus
ENSETEG00000009485	-	86	95.833	ENSCATG00000013222	RBMS3	86	95.833	Cercocebus_atys
ENSETEG00000009485	-	99	68.433	ENSCLAG00000005866	RBMS3	99	68.433	Chinchilla_lanigera
ENSETEG00000009485	-	66	73.333	ENSCSAG00000009655	RBMS3	99	73.333	Chlorocebus_sabaeus
ENSETEG00000009485	-	99	82.028	ENSCHOG00000000758	RBMS3	99	82.028	Choloepus_hoffmanni
ENSETEG00000009485	-	81	75.284	ENSCPBG00000022678	RBMS3	86	83.333	Chrysemys_picta_bellii
ENSETEG00000009485	-	86	95.833	ENSCANG00000032137	RBMS3	86	95.833	Colobus_angolensis_palliatus
ENSETEG00000009485	-	86	87.500	ENSCGRG00001007243	Rbms3	87	87.500	Cricetulus_griseus_chok1gshd
ENSETEG00000009485	-	86	87.500	ENSCGRG00000004599	Rbms3	87	87.500	Cricetulus_griseus_crigri
ENSETEG00000009485	-	81	64.124	ENSCSEG00000010011	RBMS3	83	64.124	Cynoglossus_semilaevis
ENSETEG00000009485	-	80	69.714	ENSCSEG00000014677	-	74	93.373	Cynoglossus_semilaevis
ENSETEG00000009485	-	81	64.972	ENSCVAG00000022354	rbms3	80	64.972	Cyprinodon_variegatus
ENSETEG00000009485	-	80	70.571	ENSCVAG00000022814	-	87	83.333	Cyprinodon_variegatus
ENSETEG00000009485	-	80	69.429	ENSDARG00000044574	rbms3	77	92.667	Danio_rerio
ENSETEG00000009485	-	99	68.203	ENSDNOG00000016645	RBMS3	99	68.203	Dasypus_novemcinctus
ENSETEG00000009485	-	99	66.820	ENSDORG00000007220	Rbms3	99	66.820	Dipodomys_ordii
ENSETEG00000009485	-	99	68.664	ENSEASG00005006152	RBMS3	99	68.664	Equus_asinus_asinus
ENSETEG00000009485	-	99	68.664	ENSECAG00000017871	RBMS3	99	68.664	Equus_caballus
ENSETEG00000009485	-	80	64.470	ENSEEUG00000014337	RBMS3	89	64.470	Erinaceus_europaeus
ENSETEG00000009485	-	99	54.920	ENSELUG00000002862	rbms3	85	83.333	Esox_lucius
ENSETEG00000009485	-	80	70.286	ENSELUG00000006905	-	76	93.976	Esox_lucius
ENSETEG00000009485	-	99	68.664	ENSFCAG00000002130	RBMS3	99	68.664	Felis_catus
ENSETEG00000009485	-	86	87.500	ENSFALG00000009165	RBMS3	86	87.500	Ficedula_albicollis
ENSETEG00000009485	-	99	68.203	ENSFDAG00000008278	RBMS3	99	68.203	Fukomys_damarensis
ENSETEG00000009485	-	81	57.345	ENSFHEG00000004787	RBMS3	87	54.802	Fundulus_heteroclitus
ENSETEG00000009485	-	80	70.000	ENSGMOG00000002600	-	87	70.000	Gadus_morhua
ENSETEG00000009485	-	86	87.500	ENSGALG00000011439	RBMS3	86	87.500	Gallus_gallus
ENSETEG00000009485	-	80	70.571	ENSGAFG00000003329	-	87	83.333	Gambusia_affinis
ENSETEG00000009485	-	81	64.689	ENSGAFG00000000168	rbms3	87	64.689	Gambusia_affinis
ENSETEG00000009485	-	66	70.280	ENSGAGG00000004039	RBMS3	99	70.280	Gopherus_agassizii
ENSETEG00000009485	-	86	95.833	ENSGGOG00000007228	RBMS3	86	95.833	Gorilla_gorilla
ENSETEG00000009485	-	80	70.571	ENSHBUG00000019785	-	84	83.333	Haplochromis_burtoni
ENSETEG00000009485	-	99	68.203	ENSHGLG00000002170	RBMS3	99	68.203	Heterocephalus_glaber_female
ENSETEG00000009485	-	99	68.203	ENSHGLG00100014278	RBMS3	99	68.203	Heterocephalus_glaber_male
ENSETEG00000009485	-	80	70.000	ENSHCOG00000007894	-	84	70.000	Hippocampus_comes
ENSETEG00000009485	-	80	69.143	ENSIPUG00000017680	rbms3	86	83.333	Ictalurus_punctatus
ENSETEG00000009485	-	99	68.664	ENSSTOG00000006324	RBMS3	99	68.664	Ictidomys_tridecemlineatus
ENSETEG00000009485	-	99	66.590	ENSJJAG00000014708	Rbms3	99	66.590	Jaculus_jaculus
ENSETEG00000009485	-	80	70.286	ENSKMAG00000012586	-	87	83.333	Kryptolebias_marmoratus
ENSETEG00000009485	-	81	64.407	ENSKMAG00000020500	rbms3	79	64.407	Kryptolebias_marmoratus
ENSETEG00000009485	-	50	61.739	ENSLBEG00000006677	rbms3	85	61.739	Labrus_bergylta
ENSETEG00000009485	-	80	69.628	ENSLBEG00000027388	-	86	83.333	Labrus_bergylta
ENSETEG00000009485	-	86	83.333	ENSLACG00000010581	RBMS3	86	83.333	Latimeria_chalumnae
ENSETEG00000009485	-	70	69.180	ENSLOCG00000002328	rbms3	99	69.180	Lepisosteus_oculatus
ENSETEG00000009485	-	99	68.664	ENSLAFG00000000354	RBMS3	99	68.664	Loxodonta_africana
ENSETEG00000009485	-	86	95.833	ENSMFAG00000033300	RBMS3	86	95.833	Macaca_fascicularis
ENSETEG00000009485	-	86	95.833	ENSMMUG00000004404	RBMS3	86	95.833	Macaca_mulatta
ENSETEG00000009485	-	86	95.833	ENSMNEG00000035839	RBMS3	86	95.833	Macaca_nemestrina
ENSETEG00000009485	-	86	95.833	ENSMLEG00000029464	RBMS3	86	95.833	Mandrillus_leucophaeus
ENSETEG00000009485	-	81	65.254	ENSMAMG00000024043	rbms3	79	65.254	Mastacembelus_armatus
ENSETEG00000009485	-	80	70.286	ENSMAMG00000002176	-	65	83.333	Mastacembelus_armatus
ENSETEG00000009485	-	80	70.571	ENSMZEG00005026469	-	83	83.333	Maylandia_zebra
ENSETEG00000009485	-	81	64.407	ENSMZEG00005006308	rbms3	80	64.407	Maylandia_zebra
ENSETEG00000009485	-	86	87.500	ENSMAUG00000016436	Rbms3	87	87.500	Mesocricetus_auratus
ENSETEG00000009485	-	85	95.833	ENSMICG00000049249	RBMS3	86	95.833	Microcebus_murinus
ENSETEG00000009485	-	86	87.500	ENSMOCG00000006997	Rbms3	87	87.500	Microtus_ochrogaster
ENSETEG00000009485	-	86	83.333	ENSMMOG00000015071	-	86	83.333	Mola_mola
ENSETEG00000009485	-	61	75.465	ENSMMOG00000008471	RBMS3	73	75.465	Mola_mola
ENSETEG00000009485	-	86	87.500	ENSMODG00000015125	RBMS3	86	87.500	Monodelphis_domestica
ENSETEG00000009485	-	80	69.714	ENSMALG00000009155	-	87	83.333	Monopterus_albus
ENSETEG00000009485	-	81	65.254	ENSMALG00000019536	RBMS3	80	65.254	Monopterus_albus
ENSETEG00000009485	-	81	73.295	MGP_CAROLIEiJ_G0032783	Rbms3	74	97.674	Mus_caroli
ENSETEG00000009485	-	86	87.500	ENSMUSG00000039607	Rbms3	87	87.500	Mus_musculus
ENSETEG00000009485	-	86	87.500	MGP_PahariEiJ_G0015650	Rbms3	87	87.500	Mus_pahari
ENSETEG00000009485	-	86	87.500	MGP_SPRETEiJ_G0033930	Rbms3	87	87.500	Mus_spretus
ENSETEG00000009485	-	99	68.664	ENSMPUG00000011956	RBMS3	99	68.664	Mustela_putorius_furo
ENSETEG00000009485	-	99	68.664	ENSMLUG00000000659	RBMS3	99	68.664	Myotis_lucifugus
ENSETEG00000009485	-	81	76.705	ENSNGAG00000014039	Rbms3	87	91.667	Nannospalax_galili
ENSETEG00000009485	-	80	70.571	ENSNBRG00000018065	-	87	83.333	Neolamprologus_brichardi
ENSETEG00000009485	-	86	95.833	ENSNLEG00000004129	RBMS3	86	95.833	Nomascus_leucogenys
ENSETEG00000009485	-	86	87.500	ENSMEUG00000004772	RBMS3	86	87.500	Notamacropus_eugenii
ENSETEG00000009485	-	99	68.433	ENSOPRG00000006808	RBMS3	85	68.433	Ochotona_princeps
ENSETEG00000009485	-	99	68.664	ENSODEG00000003651	RBMS3	99	68.664	Octodon_degus
ENSETEG00000009485	-	81	64.407	ENSONIG00000007172	rbms3	82	64.407	Oreochromis_niloticus
ENSETEG00000009485	-	99	65.899	ENSOANG00000010529	RBMS3	99	65.899	Ornithorhynchus_anatinus
ENSETEG00000009485	-	99	67.972	ENSOCUG00000004840	RBMS3	99	67.972	Oryctolagus_cuniculus
ENSETEG00000009485	-	81	64.689	ENSORLG00000005370	RBMS3	80	64.689	Oryzias_latipes
ENSETEG00000009485	-	80	70.286	ENSORLG00000002306	-	87	83.333	Oryzias_latipes
ENSETEG00000009485	-	80	70.000	ENSORLG00020008496	-	87	83.333	Oryzias_latipes_hni
ENSETEG00000009485	-	81	64.124	ENSORLG00020022674	RBMS3	62	93.750	Oryzias_latipes_hni
ENSETEG00000009485	-	80	70.000	ENSORLG00015015719	-	87	83.333	Oryzias_latipes_hsok
ENSETEG00000009485	-	81	64.689	ENSORLG00015005509	rbms3	62	93.750	Oryzias_latipes_hsok
ENSETEG00000009485	-	81	64.689	ENSOMEG00000014805	RBMS3	87	64.689	Oryzias_melastigma
ENSETEG00000009485	-	80	69.714	ENSOMEG00000007677	-	79	79.130	Oryzias_melastigma
ENSETEG00000009485	-	99	67.742	ENSOARG00000014684	RBMS3	99	67.742	Ovis_aries
ENSETEG00000009485	-	86	95.833	ENSPPAG00000036519	RBMS3	86	95.833	Pan_paniscus
ENSETEG00000009485	-	86	95.833	ENSPPRG00000002761	RBMS3	86	95.833	Panthera_pardus
ENSETEG00000009485	-	99	68.664	ENSPTIG00000011568	RBMS3	99	68.664	Panthera_tigris_altaica
ENSETEG00000009485	-	86	95.833	ENSPTRG00000014709	RBMS3	86	95.833	Pan_troglodytes
ENSETEG00000009485	-	99	68.433	ENSPANG00000010234	RBMS3	99	66.443	Papio_anubis
ENSETEG00000009485	-	86	87.500	ENSPSIG00000005269	RBMS3	86	87.500	Pelodiscus_sinensis
ENSETEG00000009485	-	80	70.286	ENSPMGG00000021683	-	88	70.286	Periophthalmus_magnuspinnatus
ENSETEG00000009485	-	61	74.254	ENSPMGG00000021544	rbms3	70	74.254	Periophthalmus_magnuspinnatus
ENSETEG00000009485	-	86	87.500	ENSPEMG00000001117	Rbms3	87	87.500	Peromyscus_maniculatus_bairdii
ENSETEG00000009485	-	67	87.500	ENSPCIG00000006106	RBMS3	64	96.923	Phascolarctos_cinereus
ENSETEG00000009485	-	81	64.689	ENSPFOG00000017887	rbms3	80	64.689	Poecilia_formosa
ENSETEG00000009485	-	77	62.908	ENSPLAG00000016866	-	83	62.908	Poecilia_latipinna
ENSETEG00000009485	-	86	87.500	ENSPMEG00000002993	-	87	87.500	Poecilia_mexicana
ENSETEG00000009485	-	80	70.571	ENSPREG00000018221	-	77	88.202	Poecilia_reticulata
ENSETEG00000009485	-	80	64.773	ENSPREG00000011880	rbms3	86	63.636	Poecilia_reticulata
ENSETEG00000009485	-	99	55.760	ENSPPYG00000014050	RBMS3	82	55.760	Pongo_abelii
ENSETEG00000009485	-	86	91.667	ENSPCAG00000006307	RBMS3	86	91.667	Procavia_capensis
ENSETEG00000009485	-	86	95.833	ENSPCOG00000017136	RBMS3	86	95.833	Propithecus_coquereli
ENSETEG00000009485	-	86	95.833	ENSPVAG00000014037	RBMS3	86	95.833	Pteropus_vampyrus
ENSETEG00000009485	-	80	70.571	ENSPNYG00000012624	-	87	83.333	Pundamilia_nyererei
ENSETEG00000009485	-	81	64.407	ENSPNYG00000010546	rbms3	86	60.452	Pundamilia_nyererei
ENSETEG00000009485	-	80	68.571	ENSPNAG00000001800	rbms3	86	83.333	Pygocentrus_nattereri
ENSETEG00000009485	-	81	73.864	ENSRNOG00000025881	Rbms3	87	91.667	Rattus_norvegicus
ENSETEG00000009485	-	86	95.833	ENSRBIG00000035863	RBMS3	86	95.833	Rhinopithecus_bieti
ENSETEG00000009485	-	81	77.841	ENSRROG00000027512	RBMS3	85	77.841	Rhinopithecus_roxellana
ENSETEG00000009485	-	86	95.833	ENSSBOG00000020232	RBMS3	86	95.833	Saimiri_boliviensis_boliviensis
ENSETEG00000009485	-	81	74.716	ENSSHAG00000002411	RBMS3	86	74.716	Sarcophilus_harrisii
ENSETEG00000009485	-	80	69.143	ENSSFOG00015008578	rbms3	88	69.143	Scleropages_formosus
ENSETEG00000009485	-	81	62.994	ENSSMAG00000004997	rbms3	92	62.994	Scophthalmus_maximus
ENSETEG00000009485	-	61	80.150	ENSSMAG00000020065	-	72	83.333	Scophthalmus_maximus
ENSETEG00000009485	-	81	64.972	ENSSDUG00000013656	RBMS3	81	64.972	Seriola_dumerili
ENSETEG00000009485	-	80	70.286	ENSSDUG00000019287	-	87	83.333	Seriola_dumerili
ENSETEG00000009485	-	80	70.286	ENSSLDG00000013224	-	87	83.333	Seriola_lalandi_dorsalis
ENSETEG00000009485	-	81	65.254	ENSSLDG00000020276	RBMS3	79	65.254	Seriola_lalandi_dorsalis
ENSETEG00000009485	-	61	92.135	ENSSARG00000000695	RBMS3	73	92.135	Sorex_araneus
ENSETEG00000009485	-	71	70.684	ENSSPUG00000017197	RBMS3	98	70.684	Sphenodon_punctatus
ENSETEG00000009485	-	81	64.407	ENSSPAG00000020693	rbms3	74	75.000	Stegastes_partitus
ENSETEG00000009485	-	80	70.286	ENSSPAG00000003983	-	87	83.333	Stegastes_partitus
ENSETEG00000009485	-	99	68.664	ENSSSCG00000036381	RBMS3	99	68.664	Sus_scrofa
ENSETEG00000009485	-	77	73.874	ENSTGUG00000003572	RBMS3	99	73.874	Taeniopygia_guttata
ENSETEG00000009485	-	80	70.286	ENSTRUG00000007482	-	90	83.333	Takifugu_rubripes
ENSETEG00000009485	-	81	64.972	ENSTRUG00000021719	RBMS3	85	83.333	Takifugu_rubripes
ENSETEG00000009485	-	61	86.891	ENSTBEG00000005362	RBMS3	73	86.891	Tupaia_belangeri
ENSETEG00000009485	-	99	68.433	ENSTTRG00000006202	RBMS3	99	68.433	Tursiops_truncatus
ENSETEG00000009485	-	99	68.894	ENSUMAG00000000263	RBMS3	99	68.894	Ursus_maritimus
ENSETEG00000009485	-	81	65.341	ENSVPAG00000003842	RBMS3	85	65.341	Vicugna_pacos
ENSETEG00000009485	-	81	78.409	ENSVVUG00000004660	RBMS3	78	98.343	Vulpes_vulpes
ENSETEG00000009485	-	70	69.281	ENSXETG00000032055	RBMS3	99	69.281	Xenopus_tropicalis
ENSETEG00000009485	-	76	60.303	ENSXCOG00000019600	-	87	60.303	Xiphophorus_couchianus
ENSETEG00000009485	-	81	64.689	ENSXMAG00000021783	rbms3	86	63.559	Xiphophorus_maculatus
ENSETEG00000009485	-	80	70.571	ENSXMAG00000014382	-	87	83.333	Xiphophorus_maculatus