EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSETEG00000009969 (Gene tree)
Gene ID: -
Gene Symbol: PABPC1L
Alias: C20orf119|PABPC1L1|dJ1069P2.3|ePAB
Full Name: poly(A) binding protein cytoplasmic 1 like
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Plus strand
Length: 28083 bases
Position: chrGeneScaffold_6380:92068-120150
Accession: 15797
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000008100	PABP	PF00658.18	4.6e-25	1	1
ENSETEP00000008100	RRM_1	PF00076.22	9.6e-61	1	3
ENSETEP00000008100	RRM_1	PF00076.22	9.6e-61	2	3
ENSETEP00000008100	RRM_1	PF00076.22	9.6e-61	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000009969	PABPC1L-201	1839	-	ENSETEP00000008100	612 (aa)	-	UPI0000E4177E

Gene Model

Click here to download ENSETEG00000009969's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000009969's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSETEG00000009969	PABPC1L	51	44.860	ENSETEG00000009172	-	80	43.038
ENSETEG00000009969	PABPC1L	71	82.812	ENSETEG00000018453	-	78	82.812
ENSETEG00000009969	PABPC1L	70	75.691	ENSETEG00000002793	-	80	75.691
ENSETEG00000009969	PABPC1L	67	50.732	ENSETEG00000019213	-	91	50.732

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000009969	PABPC1L	73	90.650	ENSG00000101104	PABPC1L	99	90.650	Homo_sapiens
ENSETEG00000009969	PABPC1L	73	76.423	ENSAPOG00000010842	pabpc1l	95	76.423	Acanthochromis_polyacanthus
ENSETEG00000009969	PABPC1L	57	91.057	ENSAMEG00000004099	PABPC1L	93	91.057	Ailuropoda_melanoleuca
ENSETEG00000009969	PABPC1L	72	76.016	ENSACIG00000021004	-	95	76.016	Amphilophus_citrinellus
ENSETEG00000009969	PABPC1L	72	76.423	ENSAOCG00000006167	-	97	76.423	Amphiprion_ocellaris
ENSETEG00000009969	PABPC1L	72	76.423	ENSAPEG00000010558	-	99	76.606	Amphiprion_percula
ENSETEG00000009969	PABPC1L	72	76.829	ENSATEG00000007428	pabpc1l	95	76.829	Anabas_testudineus
ENSETEG00000009969	PABPC1L	70	81.857	ENSAPLG00000008415	PABPC1L	94	81.743	Anas_platyrhynchos
ENSETEG00000009969	PABPC1L	72	81.707	ENSACAG00000011841	PABPC1L	95	81.707	Anolis_carolinensis
ENSETEG00000009969	PABPC1L	73	89.024	ENSANAG00000026826	PABPC1L	96	89.024	Aotus_nancymaae
ENSETEG00000009969	PABPC1L	72	76.016	ENSACLG00000024791	pabpc1l	95	76.016	Astatotilapia_calliptera
ENSETEG00000009969	PABPC1L	69	78.862	ENSAMXG00000013552	pabpc1l	93	78.862	Astyanax_mexicanus
ENSETEG00000009969	PABPC1L	73	89.431	ENSCJAG00000017628	PABPC1L	96	89.431	Callithrix_jacchus
ENSETEG00000009969	PABPC1L	53	90.244	ENSCAFG00000009573	PABPC1L	72	90.244	Canis_familiaris
ENSETEG00000009969	PABPC1L	72	90.650	ENSCAFG00020013828	PABPC1L	94	90.650	Canis_lupus_dingo
ENSETEG00000009969	PABPC1L	73	90.650	ENSCHIG00000025759	PABPC1L	89	90.650	Capra_hircus
ENSETEG00000009969	PABPC1L	73	88.618	ENSTSYG00000006645	PABPC1L	96	88.618	Carlito_syrichta
ENSETEG00000009969	PABPC1L	70	86.364	ENSCAPG00000014519	PABPC1L	95	86.364	Cavia_aperea
ENSETEG00000009969	PABPC1L	73	86.179	ENSCPOG00000013633	PABPC1L	96	86.179	Cavia_porcellus
ENSETEG00000009969	PABPC1L	72	89.837	ENSCCAG00000023338	PABPC1L	96	89.837	Cebus_capucinus
ENSETEG00000009969	PABPC1L	73	91.057	ENSCATG00000034065	PABPC1L	96	91.057	Cercocebus_atys
ENSETEG00000009969	PABPC1L	72	84.959	ENSCLAG00000005298	PABPC1L	96	84.959	Chinchilla_lanigera
ENSETEG00000009969	PABPC1L	73	90.650	ENSCSAG00000014242	PABPC1L	96	90.650	Chlorocebus_sabaeus
ENSETEG00000009969	PABPC1L	55	57.522	ENSCING00000002796	-	69	57.522	Ciona_intestinalis
ENSETEG00000009969	PABPC1L	68	69.262	ENSCSAVG00000003102	-	98	81.507	Ciona_savignyi
ENSETEG00000009969	PABPC1L	68	71.660	ENSCSAVG00000004246	-	92	71.660	Ciona_savignyi
ENSETEG00000009969	PABPC1L	73	91.057	ENSCANG00000037530	PABPC1L	96	91.057	Colobus_angolensis_palliatus
ENSETEG00000009969	PABPC1L	72	83.740	ENSCGRG00001021938	Pabpc1l	96	83.740	Cricetulus_griseus_chok1gshd
ENSETEG00000009969	PABPC1L	72	83.740	ENSCGRG00000007946	Pabpc1l	96	83.740	Cricetulus_griseus_crigri
ENSETEG00000009969	PABPC1L	64	76.016	ENSCSEG00000021295	pabpc1l	99	76.016	Cynoglossus_semilaevis
ENSETEG00000009969	PABPC1L	72	76.423	ENSCVAG00000015943	-	86	86.260	Cyprinodon_variegatus
ENSETEG00000009969	PABPC1L	72	78.455	ENSDARG00000002597	pabpc1l	88	89.231	Danio_rerio
ENSETEG00000009969	PABPC1L	73	92.276	ENSDNOG00000048450	PABPC1L	95	92.276	Dasypus_novemcinctus
ENSETEG00000009969	PABPC1L	72	88.618	ENSDORG00000001067	Pabpc1l	95	88.618	Dipodomys_ordii
ENSETEG00000009969	PABPC1L	73	85.772	ENSEEUG00000005978	PABPC1L	96	85.772	Erinaceus_europaeus
ENSETEG00000009969	PABPC1L	72	77.642	ENSELUG00000001811	pabpc1l	99	77.642	Esox_lucius
ENSETEG00000009969	PABPC1L	72	91.463	ENSFCAG00000011692	PABPC1L	94	91.463	Felis_catus
ENSETEG00000009969	PABPC1L	58	83.740	ENSFALG00000005372	PABPC1L	92	83.740	Ficedula_albicollis
ENSETEG00000009969	PABPC1L	73	86.585	ENSFDAG00000008291	PABPC1L	95	86.585	Fukomys_damarensis
ENSETEG00000009969	PABPC1L	72	76.829	ENSFHEG00000003398	pabpc1l	95	76.829	Fundulus_heteroclitus
ENSETEG00000009969	PABPC1L	72	76.016	ENSGMOG00000004437	pabpc1l	96	76.016	Gadus_morhua
ENSETEG00000009969	PABPC1L	56	82.805	ENSGALG00000004123	PABPC1L	92	82.927	Gallus_gallus
ENSETEG00000009969	PABPC1L	72	67.986	ENSGAFG00000021057	pabpc1l	95	67.986	Gambusia_affinis
ENSETEG00000009969	PABPC1L	72	76.423	ENSGACG00000002792	pabpc1l	96	76.423	Gasterosteus_aculeatus
ENSETEG00000009969	PABPC1L	72	84.146	ENSGAGG00000000589	PABPC1L	94	84.146	Gopherus_agassizii
ENSETEG00000009969	PABPC1L	73	90.650	ENSGGOG00000004584	PABPC1L	96	90.650	Gorilla_gorilla
ENSETEG00000009969	PABPC1L	72	76.016	ENSHBUG00000006134	pabpc1l	95	76.016	Haplochromis_burtoni
ENSETEG00000009969	PABPC1L	73	86.585	ENSHGLG00000008434	PABPC1L	96	86.585	Heterocephalus_glaber_female
ENSETEG00000009969	PABPC1L	73	86.585	ENSHGLG00100012151	PABPC1L	96	86.585	Heterocephalus_glaber_male
ENSETEG00000009969	PABPC1L	69	75.566	ENSHCOG00000009270	pabpc1l	94	75.566	Hippocampus_comes
ENSETEG00000009969	PABPC1L	72	78.862	ENSIPUG00000012602	pabpc1l	95	78.862	Ictalurus_punctatus
ENSETEG00000009969	PABPC1L	73	89.837	ENSSTOG00000003739	PABPC1L	96	89.837	Ictidomys_tridecemlineatus
ENSETEG00000009969	PABPC1L	72	59.406	ENSJJAG00000022406	Pabpc1l	94	59.406	Jaculus_jaculus
ENSETEG00000009969	PABPC1L	72	76.423	ENSKMAG00000016847	pabpc1l	96	76.423	Kryptolebias_marmoratus
ENSETEG00000009969	PABPC1L	72	78.049	ENSLBEG00000010084	pabpc1l	95	78.049	Labrus_bergylta
ENSETEG00000009969	PABPC1L	72	81.301	ENSLACG00000005762	PABPC1L	94	81.301	Latimeria_chalumnae
ENSETEG00000009969	PABPC1L	71	79.268	ENSLOCG00000007519	pabpc1l	95	79.268	Lepisosteus_oculatus
ENSETEG00000009969	PABPC1L	72	91.057	ENSLAFG00000003553	PABPC1L	95	91.057	Loxodonta_africana
ENSETEG00000009969	PABPC1L	73	91.057	ENSMFAG00000040365	PABPC1L	96	91.057	Macaca_fascicularis
ENSETEG00000009969	PABPC1L	73	91.057	ENSMNEG00000032298	PABPC1L	96	91.057	Macaca_nemestrina
ENSETEG00000009969	PABPC1L	73	91.057	ENSMLEG00000043139	PABPC1L	96	91.057	Mandrillus_leucophaeus
ENSETEG00000009969	PABPC1L	69	75.203	ENSMAMG00000011854	pabpc1l	93	75.203	Mastacembelus_armatus
ENSETEG00000009969	PABPC1L	72	76.016	ENSMZEG00005023713	pabpc1l	95	76.016	Maylandia_zebra
ENSETEG00000009969	PABPC1L	72	82.927	ENSMGAG00000003674	PABPC1L	94	82.927	Meleagris_gallopavo
ENSETEG00000009969	PABPC1L	71	83.333	ENSMOCG00000013186	Pabpc1l	95	83.333	Microtus_ochrogaster
ENSETEG00000009969	PABPC1L	72	75.610	ENSMMOG00000020574	-	90	86.923	Mola_mola
ENSETEG00000009969	PABPC1L	67	86.992	ENSMODG00000016198	PABPC1L	94	86.992	Monodelphis_domestica
ENSETEG00000009969	PABPC1L	69	74.797	ENSMALG00000021622	pabpc1l	96	74.797	Monopterus_albus
ENSETEG00000009969	PABPC1L	71	82.520	MGP_CAROLIEiJ_G0024627	Pabpc1l	95	82.520	Mus_caroli
ENSETEG00000009969	PABPC1L	71	82.520	ENSMUSG00000054582	Pabpc1l	94	82.520	Mus_musculus
ENSETEG00000009969	PABPC1L	71	82.927	MGP_PahariEiJ_G0026071	Pabpc1l	95	82.927	Mus_pahari
ENSETEG00000009969	PABPC1L	71	82.520	MGP_SPRETEiJ_G0025549	Pabpc1l	95	82.520	Mus_spretus
ENSETEG00000009969	PABPC1L	72	89.837	ENSMPUG00000017646	PABPC1L	95	89.837	Mustela_putorius_furo
ENSETEG00000009969	PABPC1L	70	87.398	ENSMLUG00000006324	PABPC1L	95	87.398	Myotis_lucifugus
ENSETEG00000009969	PABPC1L	72	84.959	ENSNGAG00000010458	Pabpc1l	96	84.959	Nannospalax_galili
ENSETEG00000009969	PABPC1L	72	76.016	ENSNBRG00000016633	pabpc1l	95	76.016	Neolamprologus_brichardi
ENSETEG00000009969	PABPC1L	62	83.333	ENSMEUG00000007905	-	87	83.333	Notamacropus_eugenii
ENSETEG00000009969	PABPC1L	73	89.431	ENSOPRG00000011846	PABPC1L	96	89.431	Ochotona_princeps
ENSETEG00000009969	PABPC1L	68	86.585	ENSODEG00000015482	PABPC1L	99	86.585	Octodon_degus
ENSETEG00000009969	PABPC1L	72	76.016	ENSONIG00000017314	pabpc1l	95	76.016	Oreochromis_niloticus
ENSETEG00000009969	PABPC1L	62	87.293	ENSOANG00000015793	-	94	87.293	Ornithorhynchus_anatinus
ENSETEG00000009969	PABPC1L	72	89.431	ENSOCUG00000003005	PABPC1L	96	89.431	Oryctolagus_cuniculus
ENSETEG00000009969	PABPC1L	72	76.423	ENSORLG00000010322	pabpc1l	95	76.423	Oryzias_latipes
ENSETEG00000009969	PABPC1L	72	76.423	ENSORLG00020021193	pabpc1l	95	76.423	Oryzias_latipes_hni
ENSETEG00000009969	PABPC1L	72	76.423	ENSORLG00015017018	pabpc1l	95	76.423	Oryzias_latipes_hsok
ENSETEG00000009969	PABPC1L	72	68.364	ENSOMEG00000010789	pabpc1l	95	68.364	Oryzias_melastigma
ENSETEG00000009969	PABPC1L	72	87.398	ENSOGAG00000032999	PABPC1L	96	87.398	Otolemur_garnettii
ENSETEG00000009969	PABPC1L	72	91.057	ENSOARG00000004578	PABPC1L	95	91.057	Ovis_aries
ENSETEG00000009969	PABPC1L	73	90.244	ENSPPAG00000039677	PABPC1L	96	90.244	Pan_paniscus
ENSETEG00000009969	PABPC1L	70	92.469	ENSPTIG00000006524	PABPC1L	95	92.469	Panthera_tigris_altaica
ENSETEG00000009969	PABPC1L	73	91.057	ENSPANG00000018788	PABPC1L	96	91.057	Papio_anubis
ENSETEG00000009969	PABPC1L	71	78.049	ENSPKIG00000007322	pabpc1l	97	78.049	Paramormyrops_kingsleyae
ENSETEG00000009969	PABPC1L	72	83.333	ENSPEMG00000020671	Pabpc1l	94	83.333	Peromyscus_maniculatus_bairdii
ENSETEG00000009969	PABPC1L	72	76.423	ENSPFOG00000013241	pabpc1l	95	76.423	Poecilia_formosa
ENSETEG00000009969	PABPC1L	72	76.423	ENSPLAG00000017490	-	95	76.423	Poecilia_latipinna
ENSETEG00000009969	PABPC1L	72	76.423	ENSPMEG00000007677	pabpc1l	95	76.423	Poecilia_mexicana
ENSETEG00000009969	PABPC1L	73	90.650	ENSPPYG00000011042	PABPC1L	96	90.650	Pongo_abelii
ENSETEG00000009969	PABPC1L	72	86.992	ENSPCOG00000020630	PABPC1L	95	86.992	Propithecus_coquereli
ENSETEG00000009969	PABPC1L	72	89.431	ENSPVAG00000012663	PABPC1L	93	89.431	Pteropus_vampyrus
ENSETEG00000009969	PABPC1L	72	76.016	ENSPNYG00000004101	pabpc1l	95	76.016	Pundamilia_nyererei
ENSETEG00000009969	PABPC1L	69	78.049	ENSPNAG00000021248	pabpc1l	89	78.049	Pygocentrus_nattereri
ENSETEG00000009969	PABPC1L	71	82.927	ENSRNOG00000012750	Pabpc1l	96	82.927	Rattus_norvegicus
ENSETEG00000009969	PABPC1L	73	90.650	ENSRBIG00000035381	PABPC1L	96	90.650	Rhinopithecus_bieti
ENSETEG00000009969	PABPC1L	73	90.244	ENSRROG00000044498	PABPC1L	96	90.244	Rhinopithecus_roxellana
ENSETEG00000009969	PABPC1L	73	89.837	ENSSBOG00000009532	-	95	89.837	Saimiri_boliviensis_boliviensis
ENSETEG00000009969	PABPC1L	70	79.661	ENSSHAG00000011446	PABPC1L	97	79.661	Sarcophilus_harrisii
ENSETEG00000009969	PABPC1L	71	80.894	ENSSFOG00015017304	pabpc1l	96	80.894	Scleropages_formosus
ENSETEG00000009969	PABPC1L	72	76.829	ENSSMAG00000010516	pabpc1l	98	86.822	Scophthalmus_maximus
ENSETEG00000009969	PABPC1L	72	77.642	ENSSDUG00000014743	pabpc1l	95	77.642	Seriola_dumerili
ENSETEG00000009969	PABPC1L	68	76.423	ENSSLDG00000006981	pabpc1l	96	76.423	Seriola_lalandi_dorsalis
ENSETEG00000009969	PABPC1L	72	81.707	ENSSPUG00000004233	PABPC1L	95	81.707	Sphenodon_punctatus
ENSETEG00000009969	PABPC1L	72	76.829	ENSSPAG00000017137	pabpc1l	94	76.829	Stegastes_partitus
ENSETEG00000009969	PABPC1L	72	89.837	ENSSSCG00000007382	PABPC1L	95	89.837	Sus_scrofa
ENSETEG00000009969	PABPC1L	72	83.740	ENSTGUG00000005114	PABPC1L	95	83.740	Taeniopygia_guttata
ENSETEG00000009969	PABPC1L	69	76.829	ENSTRUG00000011085	pabpc1l	94	76.829	Takifugu_rubripes
ENSETEG00000009969	PABPC1L	72	72.470	ENSTNIG00000017903	pabpc1l	94	72.470	Tetraodon_nigroviridis
ENSETEG00000009969	PABPC1L	72	90.244	ENSTBEG00000002851	PABPC1L	78	90.244	Tupaia_belangeri
ENSETEG00000009969	PABPC1L	67	87.603	ENSTTRG00000007618	PABPC1L	95	87.603	Tursiops_truncatus
ENSETEG00000009969	PABPC1L	72	91.057	ENSUAMG00000017682	PABPC1L	94	91.057	Ursus_americanus
ENSETEG00000009969	PABPC1L	72	91.057	ENSVVUG00000018939	PABPC1L	98	90.286	Vulpes_vulpes
ENSETEG00000009969	PABPC1L	72	80.894	ENSXETG00000022831	pabpc1l	94	80.894	Xenopus_tropicalis
ENSETEG00000009969	PABPC1L	72	76.829	ENSXCOG00000005459	pabpc1l	99	82.979	Xiphophorus_couchianus
ENSETEG00000009969	PABPC1L	72	76.829	ENSXMAG00000017135	pabpc1l	95	76.829	Xiphophorus_maculatus