EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSETEG00000010110 (Gene tree)
Gene ID
-
Gene Symbol
UPF3A
Alias
HUPF3A|RENT3A|UPF3
Full Name
UPF3A%2C regulator of nonsense mediated mRNA decay
Gene Type
protein_coding
Species
Echinops_telfairi
Status
putative
Strand
Plus strand
Length
27982 bases
Position
chrGeneScaffold_6604:22815-50796
Accession
20332
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSETEP00000008210Smg4_UPF3PF03467.151.1e-2712
ENSETEP00000008210Smg4_UPF3PF03467.151.1e-2722
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSETET00000010111UPF3A-2011443-ENSETEP00000008210480 (aa)-UPI0000E41D54
Gene Model
Click here to download ENSETEG00000010110's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000010110's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSETEG00000010110UPF3A9965.756ENSG00000169062UPF3A9971.963Homo_sapiens
ENSETEG00000010110UPF3A9652.586ENSAPOG00000013484upf3a9252.586Acanthochromis_polyacanthus
ENSETEG00000010110UPF3A8541.284ENSAPOG00000012775upf3b9340.509Acanthochromis_polyacanthus
ENSETEG00000010110UPF3A9038.681ENSAMEG00000000163UPF3B8644.028Ailuropoda_melanoleuca
ENSETEG00000010110UPF3A9464.270ENSAMEG00000004259UPF3A9963.617Ailuropoda_melanoleuca
ENSETEG00000010110UPF3A9649.485ENSACIG00000020468upf3a9349.485Amphilophus_citrinellus
ENSETEG00000010110UPF3A5050.400ENSAOCG00000000706upf3b9239.535Amphiprion_ocellaris
ENSETEG00000010110UPF3A9652.586ENSAOCG00000020784upf3a9252.586Amphiprion_ocellaris
ENSETEG00000010110UPF3A9652.586ENSAPEG00000003519upf3a9252.586Amphiprion_percula
ENSETEG00000010110UPF3A5051.600ENSAPEG00000005545upf3b9340.139Amphiprion_percula
ENSETEG00000010110UPF3A9652.155ENSATEG00000005843upf3a9252.586Anabas_testudineus
ENSETEG00000010110UPF3A8339.663ENSACAG00000003625UPF3B8740.244Anolis_carolinensis
ENSETEG00000010110UPF3A8467.067ENSACAG00000001540UPF3A9967.067Anolis_carolinensis
ENSETEG00000010110UPF3A8638.194ENSANAG00000025598-6971.429Aotus_nancymaae
ENSETEG00000010110UPF3A9963.866ENSANAG00000021713UPF3A9963.445Aotus_nancymaae
ENSETEG00000010110UPF3A8639.030ENSANAG00000021894-8643.326Aotus_nancymaae
ENSETEG00000010110UPF3A9650.622ENSACLG00000026274upf3a9250.622Astatotilapia_calliptera
ENSETEG00000010110UPF3A9652.211ENSAMXG00000002608upf3a9255.300Astyanax_mexicanus
ENSETEG00000010110UPF3A9964.916ENSCJAG00000019102UPF3A9172.897Callithrix_jacchus
ENSETEG00000010110UPF3A8638.799ENSCJAG00000004975UPF3B8643.091Callithrix_jacchus
ENSETEG00000010110UPF3A9764.516ENSCAFG00000006504UPF3A9964.086Canis_familiaris
ENSETEG00000010110UPF3A8638.161ENSCAFG00000018426UPF3B8943.182Canis_familiaris
ENSETEG00000010110UPF3A9764.346ENSCAFG00020014268UPF3A9963.924Canis_lupus_dingo
ENSETEG00000010110UPF3A7271.429ENSCAFG00020004074UPF3B7371.429Canis_lupus_dingo
ENSETEG00000010110UPF3A8638.741ENSCHIG00000011454-8635.556Capra_hircus
ENSETEG00000010110UPF3A8638.964ENSCHIG00000018011-5351.220Capra_hircus
ENSETEG00000010110UPF3A9961.795ENSCHIG00000008682UPF3A9461.587Capra_hircus
ENSETEG00000010110UPF3A7064.451ENSTSYG00000001918UPF3A9164.451Carlito_syrichta
ENSETEG00000010110UPF3A8639.070ENSTSYG00000014690UPF3B8642.657Carlito_syrichta
ENSETEG00000010110UPF3A8259.898ENSCPOG00000006824UPF3A8760.053Cavia_porcellus
ENSETEG00000010110UPF3A9965.833ENSCCAG00000018406UPF3A10065.208Cebus_capucinus
ENSETEG00000010110UPF3A8033.420ENSCCAG00000029813-8432.041Cebus_capucinus
ENSETEG00000010110UPF3A9965.126ENSCATG00000029733UPF3A9964.706Cercocebus_atys
ENSETEG00000010110UPF3A5244.402ENSCLAG00000003260UPF3B8345.343Chinchilla_lanigera
ENSETEG00000010110UPF3A9964.301ENSCSAG00000017388UPF3A9963.674Chlorocebus_sabaeus
ENSETEG00000010110UPF3A5046.091ENSCPBG00000020685UPF3B9139.437Chrysemys_picta_bellii
ENSETEG00000010110UPF3A8536.952ENSCGRG00001006858-8443.099Cricetulus_griseus_chok1gshd
ENSETEG00000010110UPF3A9159.589ENSCGRG00001017387Upf3a9659.059Cricetulus_griseus_chok1gshd
ENSETEG00000010110UPF3A9059.353ENSCGRG00000001468Upf3a9659.242Cricetulus_griseus_crigri
ENSETEG00000010110UPF3A8039.698ENSCGRG00000007627Upf3b9342.963Cricetulus_griseus_crigri
ENSETEG00000010110UPF3A8953.613ENSCSEG00000005106upf3a8555.446Cynoglossus_semilaevis
ENSETEG00000010110UPF3A8354.591ENSCVAG00000022333upf3a8355.000Cyprinodon_variegatus
ENSETEG00000010110UPF3A9551.634ENSDARG00000069297upf3a8555.639Danio_rerio
ENSETEG00000010110UPF3A5044.177ENSDARG00000000489upf3b9236.343Danio_rerio
ENSETEG00000010110UPF3A8973.103ENSDNOG00000034391UPF3A9473.861Dasypus_novemcinctus
ENSETEG00000010110UPF3A8440.284ENSDORG00000006077Upf3b8544.000Dipodomys_ordii
ENSETEG00000010110UPF3A10065.984ENSEASG00005021884UPF3A10064.754Equus_asinus_asinus
ENSETEG00000010110UPF3A8640.793ENSEASG00005012919UPF3B6371.429Equus_asinus_asinus
ENSETEG00000010110UPF3A10065.984ENSECAG00000017141UPF3A10064.754Equus_caballus
ENSETEG00000010110UPF3A8640.793ENSECAG00000016947UPF3B6371.429Equus_caballus
ENSETEG00000010110UPF3A9950.699ENSELUG00000011050upf3a9950.699Esox_lucius
ENSETEG00000010110UPF3A9965.208ENSFCAG00000014602UPF3A9964.583Felis_catus
ENSETEG00000010110UPF3A8538.967ENSFDAG00000018869UPF3B8344.335Fukomys_damarensis
ENSETEG00000010110UPF3A6955.030ENSGMOG00000019615upf3a10054.867Gadus_morhua
ENSETEG00000010110UPF3A5050.602ENSGMOG00000001621upf3b8741.289Gadus_morhua
ENSETEG00000010110UPF3A9452.735ENSGAFG00000021170upf3a8256.675Gambusia_affinis
ENSETEG00000010110UPF3A6953.916ENSGACG00000001972upf3a10054.354Gasterosteus_aculeatus
ENSETEG00000010110UPF3A8837.916ENSGAGG00000001219UPF3B9140.046Gopherus_agassizii
ENSETEG00000010110UPF3A9965.336ENSGGOG00000015428UPF3A9964.706Gorilla_gorilla
ENSETEG00000010110UPF3A8652.619ENSGGOG00000043074-7786.111Gorilla_gorilla
ENSETEG00000010110UPF3A8752.113ENSGGOG00000041219-8186.111Gorilla_gorilla
ENSETEG00000010110UPF3A9652.586ENSHBUG00000011325upf3a9252.586Haplochromis_burtoni
ENSETEG00000010110UPF3A9038.190ENSHGLG00000019582-8743.187Heterocephalus_glaber_female
ENSETEG00000010110UPF3A8361.111ENSHGLG00000001544UPF3A8661.702Heterocephalus_glaber_female
ENSETEG00000010110UPF3A5241.634ENSHGLG00000011189-8341.193Heterocephalus_glaber_female
ENSETEG00000010110UPF3A5241.634ENSHGLG00100001889-8341.092Heterocephalus_glaber_male
ENSETEG00000010110UPF3A8361.111ENSHGLG00100013244UPF3A8661.702Heterocephalus_glaber_male
ENSETEG00000010110UPF3A9038.514ENSHGLG00100002042-8643.632Heterocephalus_glaber_male
ENSETEG00000010110UPF3A8351.990ENSHCOG00000013985upf3a8452.357Hippocampus_comes
ENSETEG00000010110UPF3A8143.373ENSHCOG00000017004upf3b8641.951Hippocampus_comes
ENSETEG00000010110UPF3A9950.101ENSIPUG00000023450upf3a9253.793Ictalurus_punctatus
ENSETEG00000010110UPF3A8937.639ENSSTOG00000001101UPF3B8644.028Ictidomys_tridecemlineatus
ENSETEG00000010110UPF3A5244.094ENSJJAG00000000053Upf3b8343.980Jaculus_jaculus
ENSETEG00000010110UPF3A9452.954ENSKMAG00000004381upf3a9052.735Kryptolebias_marmoratus
ENSETEG00000010110UPF3A5148.031ENSLBEG00000028689upf3b5443.902Labrus_bergylta
ENSETEG00000010110UPF3A9647.414ENSLBEG00000021570upf3a9346.336Labrus_bergylta
ENSETEG00000010110UPF3A8540.139ENSLACG00000008691UPF3B9247.608Latimeria_chalumnae
ENSETEG00000010110UPF3A9955.230ENSLOCG00000002665upf3a9456.444Lepisosteus_oculatus
ENSETEG00000010110UPF3A8538.876ENSLAFG00000001267UPF3B8643.925Loxodonta_africana
ENSETEG00000010110UPF3A8259.512ENSLAFG00000023358UPF3A9858.392Loxodonta_africana
ENSETEG00000010110UPF3A9961.042ENSMFAG00000045016UPF3A9960.752Macaca_fascicularis
ENSETEG00000010110UPF3A9463.111ENSMMUG00000007449UPF3A9961.555Macaca_mulatta
ENSETEG00000010110UPF3A9959.343ENSMNEG00000036402UPF3A8863.084Macaca_nemestrina
ENSETEG00000010110UPF3A8464.691ENSMLEG00000014726UPF3A8988.571Mandrillus_leucophaeus
ENSETEG00000010110UPF3A9650.833ENSMAMG00000018364upf3a9250.833Mastacembelus_armatus
ENSETEG00000010110UPF3A9650.622ENSMZEG00005021571upf3a9250.622Maylandia_zebra
ENSETEG00000010110UPF3A8165.920ENSMGAG00000014837UPF3A9965.920Meleagris_gallopavo
ENSETEG00000010110UPF3A8543.721ENSMAUG00000008705Upf3b8441.337Mesocricetus_auratus
ENSETEG00000010110UPF3A6567.197ENSMOCG00000000550Upf3a8367.450Microtus_ochrogaster
ENSETEG00000010110UPF3A9649.064ENSMMOG00000019751upf3a8552.732Mola_mola
ENSETEG00000010110UPF3A8141.565ENSMODG00000010232UPF3B9341.832Monodelphis_domestica
ENSETEG00000010110UPF3A8671.028ENSMODG00000003159UPF3A9971.028Monodelphis_domestica
ENSETEG00000010110UPF3A9036.807MGP_CAROLIEiJ_G0032999Upf3b8642.790Mus_caroli
ENSETEG00000010110UPF3A8758.852MGP_CAROLIEiJ_G0030848Upf3a9658.531Mus_caroli
ENSETEG00000010110UPF3A9036.184ENSMUSG00000036572Upf3b8642.553Mus_musculus
ENSETEG00000010110UPF3A8759.330ENSMUSG00000038398Upf3a9659.479Mus_musculus
ENSETEG00000010110UPF3A8759.574MGP_PahariEiJ_G0021311Upf3a9659.242Mus_pahari
ENSETEG00000010110UPF3A8737.011MGP_PahariEiJ_G0031543Upf3b8443.243Mus_pahari
ENSETEG00000010110UPF3A9036.184MGP_SPRETEiJ_G0034152Upf3b8642.553Mus_spretus
ENSETEG00000010110UPF3A8759.091MGP_SPRETEiJ_G0031958Upf3a9659.242Mus_spretus
ENSETEG00000010110UPF3A9964.066ENSMPUG00000009139UPF3A9963.450Mustela_putorius_furo
ENSETEG00000010110UPF3A8638.337ENSMPUG00000001531UPF3B8843.387Mustela_putorius_furo
ENSETEG00000010110UPF3A8638.018ENSMLUG00000010821UPF3B9042.694Myotis_lucifugus
ENSETEG00000010110UPF3A8567.221ENSMLUG00000015905UPF3A10067.221Myotis_lucifugus
ENSETEG00000010110UPF3A9161.048ENSNGAG00000019314Upf3a9660.427Nannospalax_galili
ENSETEG00000010110UPF3A9652.586ENSNBRG00000000828upf3a9252.586Neolamprologus_brichardi
ENSETEG00000010110UPF3A9964.151ENSNLEG00000007563UPF3A9964.780Nomascus_leucogenys
ENSETEG00000010110UPF3A6454.194ENSMEUG00000015615UPF3B8153.846Notamacropus_eugenii
ENSETEG00000010110UPF3A6569.231ENSOPRG00000008846-5670.040Ochotona_princeps
ENSETEG00000010110UPF3A8937.054ENSODEG00000002186-8642.891Octodon_degus
ENSETEG00000010110UPF3A9651.717ENSONIG00000006817upf3a9251.717Oreochromis_niloticus
ENSETEG00000010110UPF3A8038.015ENSOANG00000002594-9338.780Ornithorhynchus_anatinus
ENSETEG00000010110UPF3A7660.811ENSOANG00000006985-8594.118Ornithorhynchus_anatinus
ENSETEG00000010110UPF3A9849.796ENSOCUG00000008450UPF3A9450.638Oryctolagus_cuniculus
ENSETEG00000010110UPF3A8534.014ENSORLG00000001026upf3b9338.194Oryzias_latipes
ENSETEG00000010110UPF3A8953.349ENSORLG00000010911upf3a8356.000Oryzias_latipes
ENSETEG00000010110UPF3A8953.380ENSORLG00020014317upf3a8255.808Oryzias_latipes_hni
ENSETEG00000010110UPF3A8534.014ENSORLG00020003758upf3b9338.194Oryzias_latipes_hni
ENSETEG00000010110UPF3A9452.193ENSOMEG00000014425upf3a9051.535Oryzias_melastigma
ENSETEG00000010110UPF3A9038.395ENSOGAG00000033003-8645.521Otolemur_garnettii
ENSETEG00000010110UPF3A5244.015ENSOGAG00000004643-8643.427Otolemur_garnettii
ENSETEG00000010110UPF3A8363.750ENSOGAG00000004788UPF3A9264.323Otolemur_garnettii
ENSETEG00000010110UPF3A9761.474ENSOARG00000009004UPF3A8866.024Ovis_aries
ENSETEG00000010110UPF3A8440.887ENSOARG00000007869-9437.931Ovis_aries
ENSETEG00000010110UPF3A9963.655ENSPPAG00000042267UPF3A9663.696Pan_paniscus
ENSETEG00000010110UPF3A9965.208ENSPPRG00000025062UPF3A9964.583Panthera_pardus
ENSETEG00000010110UPF3A8638.041ENSPPRG00000023536UPF3B9042.889Panthera_pardus
ENSETEG00000010110UPF3A9964.286ENSPTRG00000006073UPF3A9964.286Pan_troglodytes
ENSETEG00000010110UPF3A8454.279ENSPTRG00000041187-8283.333Pan_troglodytes
ENSETEG00000010110UPF3A8452.323ENSPTRG00000041835-8183.333Pan_troglodytes
ENSETEG00000010110UPF3A8751.896ENSPTRG00000051640-8472.340Pan_troglodytes
ENSETEG00000010110UPF3A9965.126ENSPANG00000004346UPF3A9964.706Papio_anubis
ENSETEG00000010110UPF3A8843.409ENSPKIG00000019226upf3b9340.275Paramormyrops_kingsleyae
ENSETEG00000010110UPF3A9947.683ENSPKIG00000004422upf3a9850.448Paramormyrops_kingsleyae
ENSETEG00000010110UPF3A8568.780ENSPSIG00000007468UPF3A10068.780Pelodiscus_sinensis
ENSETEG00000010110UPF3A9648.654ENSPMGG00000012696upf3a8551.300Periophthalmus_magnuspinnatus
ENSETEG00000010110UPF3A9159.817ENSPEMG00000019968-9659.716Peromyscus_maniculatus_bairdii
ENSETEG00000010110UPF3A8538.551ENSPEMG00000012352Upf3b8444.039Peromyscus_maniculatus_bairdii
ENSETEG00000010110UPF3A8541.163ENSPCIG00000028914UPF3B8441.337Phascolarctos_cinereus
ENSETEG00000010110UPF3A8262.500ENSPCIG00000019590-9561.181Phascolarctos_cinereus
ENSETEG00000010110UPF3A9453.509ENSPFOG00000013222upf3a8257.576Poecilia_formosa
ENSETEG00000010110UPF3A9452.954ENSPLAG00000011960upf3a8356.927Poecilia_latipinna
ENSETEG00000010110UPF3A9450.840ENSPMEG00000000836upf3a8354.327Poecilia_mexicana
ENSETEG00000010110UPF3A9866.525ENSPPYG00000005536UPF3A9865.885Pongo_abelii
ENSETEG00000010110UPF3A7087.316ENSPCAG00000013124UPF3A6888.854Procavia_capensis
ENSETEG00000010110UPF3A8643.779ENSPCOG00000021960UPF3B8345.455Propithecus_coquereli
ENSETEG00000010110UPF3A10065.560ENSPVAG00000005656UPF3A10065.560Pteropus_vampyrus
ENSETEG00000010110UPF3A9650.622ENSPNYG00000011289upf3a9250.622Pundamilia_nyererei
ENSETEG00000010110UPF3A9650.947ENSPNAG00000019532upf3a9253.687Pygocentrus_nattereri
ENSETEG00000010110UPF3A8637.753ENSPNAG00000021528upf3b9336.239Pygocentrus_nattereri
ENSETEG00000010110UPF3A9036.184ENSRNOG00000039994Upf3b8642.588Rattus_norvegicus
ENSETEG00000010110UPF3A8559.804ENSRNOG00000017397Upf3a9359.439Rattus_norvegicus
ENSETEG00000010110UPF3A8664.493ENSRBIG00000034007UPF3A8280.851Rhinopithecus_bieti
ENSETEG00000010110UPF3A8464.851ENSRROG00000012212UPF3A7588.571Rhinopithecus_roxellana
ENSETEG00000010110UPF3A9959.748ENSSBOG00000029989UPF3A9959.119Saimiri_boliviensis_boliviensis
ENSETEG00000010110UPF3A8639.030ENSSBOG00000019740UPF3B7852.147Saimiri_boliviensis_boliviensis
ENSETEG00000010110UPF3A8670.983ENSSHAG00000009895UPF3A9970.983Sarcophilus_harrisii
ENSETEG00000010110UPF3A8142.822ENSSHAG00000008634UPF3B8342.432Sarcophilus_harrisii
ENSETEG00000010110UPF3A9449.032ENSSFOG00015021851upf3a9250.577Scleropages_formosus
ENSETEG00000010110UPF3A5246.094ENSSFOG00015005614upf3b9338.283Scleropages_formosus
ENSETEG00000010110UPF3A5051.394ENSSMAG00000012913upf3b8840.047Scophthalmus_maximus
ENSETEG00000010110UPF3A9150.756ENSSMAG00000003858upf3a9049.892Scophthalmus_maximus
ENSETEG00000010110UPF3A9650.728ENSSDUG00000009680upf3a9250.520Seriola_dumerili
ENSETEG00000010110UPF3A9652.473ENSSLDG00000009700upf3a9252.258Seriola_lalandi_dorsalis
ENSETEG00000010110UPF3A8175.194ENSSARG00000007262UPF3A9473.385Sorex_araneus
ENSETEG00000010110UPF3A9038.816ENSSPUG00000013082UPF3B8939.070Sphenodon_punctatus
ENSETEG00000010110UPF3A9646.121ENSSPAG00000007938upf3a9251.078Stegastes_partitus
ENSETEG00000010110UPF3A10062.500ENSSSCG00000024679UPF3A9762.090Sus_scrofa
ENSETEG00000010110UPF3A8638.799ENSSSCG00000012617UPF3B8642.956Sus_scrofa
ENSETEG00000010110UPF3A8272.519ENSTGUG00000009493UPF3A9972.519Taeniopygia_guttata
ENSETEG00000010110UPF3A9648.491ENSTRUG00000012730upf3a9149.663Takifugu_rubripes
ENSETEG00000010110UPF3A8642.361ENSTRUG00000010645upf3b9342.402Takifugu_rubripes
ENSETEG00000010110UPF3A8346.883ENSTNIG00000014973upf3a9947.236Tetraodon_nigroviridis
ENSETEG00000010110UPF3A8740.139ENSTNIG00000015763upf3b9239.858Tetraodon_nigroviridis
ENSETEG00000010110UPF3A5561.132ENSTBEG00000017186-8357.736Tupaia_belangeri
ENSETEG00000010110UPF3A5441.935ENSTBEG00000003229UPF3B5639.837Tupaia_belangeri
ENSETEG00000010110UPF3A8567.656ENSTTRG00000015414UPF3A7067.656Tursiops_truncatus
ENSETEG00000010110UPF3A8639.767ENSUAMG00000024565UPF3B6371.429Ursus_americanus
ENSETEG00000010110UPF3A8538.129ENSUMAG00000002150UPF3B8638.129Ursus_maritimus
ENSETEG00000010110UPF3A8464.286ENSVPAG00000003525UPF3A9964.286Vicugna_pacos
ENSETEG00000010110UPF3A8638.283ENSVVUG00000011594UPF3B6271.429Vulpes_vulpes
ENSETEG00000010110UPF3A9961.807ENSVVUG00000013538UPF3A9861.602Vulpes_vulpes
ENSETEG00000010110UPF3A8442.005ENSXETG00000007440upf3b7154.878Xenopus_tropicalis
ENSETEG00000010110UPF3A8453.865ENSXETG00000002572upf3a9154.987Xenopus_tropicalis
ENSETEG00000010110UPF3A6853.509ENSXCOG00000018591upf3a6057.792Xiphophorus_couchianus
ENSETEG00000010110UPF3A9452.954ENSXMAG00000013452upf3a8256.927Xiphophorus_maculatus

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