EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSETEG00000010336 (Gene tree)
Gene ID: -
Gene Symbol: SMG5
Alias: EST1B|KIAA1089|LPTS-RP1|LPTSRP1|RP11-54H19.7|SMG-5
Full Name: SMG5%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Echinops_telfairi
Status: putative
Strand: Minus strand
Length: 31834 bases
Position: chrGeneScaffold_5663:266051-297884
Accession: 24644
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSETEP00000008394	EST1	PF10374.9	3.9e-24	1	1
ENSETEP00000008394	EST1_DNA_bind	PF10373.9	2.4e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSETET00000010336	SMG5-201	2739	-	ENSETEP00000008394	913 (aa)	-	UPI0000E42BB7

Gene Model

Click here to download ENSETEG00000010336's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSETEG00000010336's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSETEG00000010336	SMG5	83	97.087	ENSG00000198952	SMG5	82	97.087	Homo_sapiens
ENSETEG00000010336	SMG5	81	85.437	ENSAPOG00000019690	smg5	75	85.437	Acanthochromis_polyacanthus
ENSETEG00000010336	SMG5	88	97.087	ENSAMEG00000014458	SMG5	82	97.087	Ailuropoda_melanoleuca
ENSETEG00000010336	SMG5	82	84.466	ENSACIG00000001353	smg5	74	84.466	Amphilophus_citrinellus
ENSETEG00000010336	SMG5	81	85.437	ENSAOCG00000019483	smg5	75	85.437	Amphiprion_ocellaris
ENSETEG00000010336	SMG5	81	85.437	ENSAPEG00000022949	smg5	75	85.437	Amphiprion_percula
ENSETEG00000010336	SMG5	81	83.495	ENSATEG00000005348	smg5	74	83.495	Anabas_testudineus
ENSETEG00000010336	SMG5	88	88.350	ENSAPLG00000010263	SMG5	82	88.350	Anas_platyrhynchos
ENSETEG00000010336	SMG5	83	96.117	ENSANAG00000032899	SMG5	82	96.117	Aotus_nancymaae
ENSETEG00000010336	SMG5	84	85.437	ENSACLG00000009311	smg5	76	85.437	Astatotilapia_calliptera
ENSETEG00000010336	SMG5	63	84.466	ENSAMXG00000024616	smg5	76	84.466	Astyanax_mexicanus
ENSETEG00000010336	SMG5	89	97.087	ENSBTAG00000009435	SMG5	82	97.087	Bos_taurus
ENSETEG00000010336	SMG5	81	54.902	ENSBTAG00000021747	-	74	54.902	Bos_taurus
ENSETEG00000010336	SMG5	89	95.146	ENSCJAG00000005684	SMG5	85	95.146	Callithrix_jacchus
ENSETEG00000010336	SMG5	89	97.087	ENSCAFG00000016839	SMG5	82	97.087	Canis_familiaris
ENSETEG00000010336	SMG5	89	97.087	ENSCAFG00020006061	SMG5	82	97.087	Canis_lupus_dingo
ENSETEG00000010336	SMG5	89	97.087	ENSCHIG00000007709	SMG5	82	97.087	Capra_hircus
ENSETEG00000010336	SMG5	81	54.902	ENSCHIG00000006323	-	74	54.902	Capra_hircus
ENSETEG00000010336	SMG5	83	97.087	ENSTSYG00000004099	SMG5	82	97.087	Carlito_syrichta
ENSETEG00000010336	SMG5	75	98.058	ENSCAPG00000003631	SMG5	72	98.058	Cavia_aperea
ENSETEG00000010336	SMG5	83	98.058	ENSCPOG00000015696	SMG5	82	98.058	Cavia_porcellus
ENSETEG00000010336	SMG5	83	96.117	ENSCCAG00000027409	SMG5	82	96.117	Cebus_capucinus
ENSETEG00000010336	SMG5	89	97.087	ENSCATG00000030539	SMG5	82	97.087	Cercocebus_atys
ENSETEG00000010336	SMG5	83	97.087	ENSCLAG00000003983	SMG5	82	97.087	Chinchilla_lanigera
ENSETEG00000010336	SMG5	89	97.087	ENSCSAG00000002120	SMG5	82	97.087	Chlorocebus_sabaeus
ENSETEG00000010336	SMG5	84	91.262	ENSCPBG00000025848	SMG5	82	91.262	Chrysemys_picta_bellii
ENSETEG00000010336	SMG5	78	58.654	ENSCING00000008706	-	73	58.654	Ciona_intestinalis
ENSETEG00000010336	SMG5	89	97.087	ENSCANG00000029208	SMG5	85	97.087	Colobus_angolensis_palliatus
ENSETEG00000010336	SMG5	53	50.000	ENSCGRG00001000584	-	90	49.293	Cricetulus_griseus_chok1gshd
ENSETEG00000010336	SMG5	91	93.204	ENSCGRG00001006336	Smg5	82	93.204	Cricetulus_griseus_chok1gshd
ENSETEG00000010336	SMG5	88	93.204	ENSCGRG00000005111	Smg5	82	93.204	Cricetulus_griseus_crigri
ENSETEG00000010336	SMG5	82	81.553	ENSCSEG00000014220	smg5	76	81.553	Cynoglossus_semilaevis
ENSETEG00000010336	SMG5	84	84.466	ENSCVAG00000000529	smg5	74	84.466	Cyprinodon_variegatus
ENSETEG00000010336	SMG5	63	83.495	ENSDARG00000041481	smg5	75	83.495	Danio_rerio
ENSETEG00000010336	SMG5	83	97.087	ENSDNOG00000000051	SMG5	82	97.087	Dasypus_novemcinctus
ENSETEG00000010336	SMG5	71	41.000	ENSDNOG00000039862	-	68	41.000	Dasypus_novemcinctus
ENSETEG00000010336	SMG5	84	95.146	ENSDORG00000010382	Smg5	82	95.146	Dipodomys_ordii
ENSETEG00000010336	SMG5	66	69.903	ENSEBUG00000003739	smg5	67	69.903	Eptatretus_burgeri
ENSETEG00000010336	SMG5	82	97.087	ENSEASG00005019122	SMG5	82	97.087	Equus_asinus_asinus
ENSETEG00000010336	SMG5	83	97.087	ENSECAG00000001389	SMG5	82	97.087	Equus_caballus
ENSETEG00000010336	SMG5	54	96.830	ENSEEUG00000012690	SMG5	51	96.830	Erinaceus_europaeus
ENSETEG00000010336	SMG5	82	82.692	ENSELUG00000012585	smg5	75	82.692	Esox_lucius
ENSETEG00000010336	SMG5	89	97.087	ENSFCAG00000011783	SMG5	82	97.087	Felis_catus
ENSETEG00000010336	SMG5	64	79.801	ENSFALG00000001166	-	99	79.801	Ficedula_albicollis
ENSETEG00000010336	SMG5	88	95.146	ENSFDAG00000017388	SMG5	82	95.146	Fukomys_damarensis
ENSETEG00000010336	SMG5	74	83.495	ENSFHEG00000013939	smg5	73	83.495	Fundulus_heteroclitus
ENSETEG00000010336	SMG5	81	83.495	ENSGMOG00000007310	smg5	75	83.495	Gadus_morhua
ENSETEG00000010336	SMG5	90	85.437	ENSGALG00000029918	-	83	85.437	Gallus_gallus
ENSETEG00000010336	SMG5	58	84.466	ENSGAFG00000021691	smg5	76	84.466	Gambusia_affinis
ENSETEG00000010336	SMG5	81	84.466	ENSGACG00000013142	smg5	74	84.466	Gasterosteus_aculeatus
ENSETEG00000010336	SMG5	91	90.291	ENSGAGG00000016131	SMG5	83	90.291	Gopherus_agassizii
ENSETEG00000010336	SMG5	83	97.087	ENSGGOG00000010932	SMG5	82	97.087	Gorilla_gorilla
ENSETEG00000010336	SMG5	82	85.437	ENSHBUG00000008654	smg5	76	85.437	Haplochromis_burtoni
ENSETEG00000010336	SMG5	89	97.087	ENSHGLG00000019152	SMG5	82	97.087	Heterocephalus_glaber_female
ENSETEG00000010336	SMG5	89	97.087	ENSHGLG00100015948	SMG5	90	97.087	Heterocephalus_glaber_male
ENSETEG00000010336	SMG5	58	82.716	ENSHCOG00000010229	smg5	58	82.716	Hippocampus_comes
ENSETEG00000010336	SMG5	81	83.495	ENSIPUG00000006624	Smg5	75	83.495	Ictalurus_punctatus
ENSETEG00000010336	SMG5	84	96.117	ENSSTOG00000001780	SMG5	82	96.117	Ictidomys_tridecemlineatus
ENSETEG00000010336	SMG5	91	94.175	ENSJJAG00000022763	Smg5	82	94.175	Jaculus_jaculus
ENSETEG00000010336	SMG5	81	85.437	ENSLBEG00000002145	smg5	74	85.437	Labrus_bergylta
ENSETEG00000010336	SMG5	91	60.365	ENSLACG00000010521	SMG5	83	60.677	Latimeria_chalumnae
ENSETEG00000010336	SMG5	91	97.087	ENSLAFG00000006241	SMG5	82	97.087	Loxodonta_africana
ENSETEG00000010336	SMG5	89	97.087	ENSMFAG00000045357	SMG5	82	97.087	Macaca_fascicularis
ENSETEG00000010336	SMG5	89	97.087	ENSMMUG00000000090	SMG5	82	97.087	Macaca_mulatta
ENSETEG00000010336	SMG5	89	97.087	ENSMNEG00000044425	SMG5	82	97.087	Macaca_nemestrina
ENSETEG00000010336	SMG5	78	97.087	ENSMLEG00000041192	SMG5	82	97.087	Mandrillus_leucophaeus
ENSETEG00000010336	SMG5	81	85.437	ENSMAMG00000010683	smg5	75	85.437	Mastacembelus_armatus
ENSETEG00000010336	SMG5	84	85.437	ENSMZEG00005015815	smg5	78	85.437	Maylandia_zebra
ENSETEG00000010336	SMG5	61	44.797	ENSMAUG00000000043	-	96	46.607	Mesocricetus_auratus
ENSETEG00000010336	SMG5	91	92.233	ENSMAUG00000010381	Smg5	82	92.233	Mesocricetus_auratus
ENSETEG00000010336	SMG5	82	97.297	ENSMICG00000002257	SMG5	82	97.087	Microcebus_murinus
ENSETEG00000010336	SMG5	91	93.204	ENSMOCG00000016590	Smg5	83	93.204	Microtus_ochrogaster
ENSETEG00000010336	SMG5	53	48.290	ENSMOCG00000008423	-	86	48.367	Microtus_ochrogaster
ENSETEG00000010336	SMG5	75	82.524	ENSMMOG00000017199	smg5	75	82.524	Mola_mola
ENSETEG00000010336	SMG5	53	43.269	ENSMODG00000010675	-	55	43.269	Monodelphis_domestica
ENSETEG00000010336	SMG5	71	42.718	ENSMODG00000004511	-	53	42.718	Monodelphis_domestica
ENSETEG00000010336	SMG5	88	94.521	ENSMODG00000016901	SMG5	89	94.521	Monodelphis_domestica
ENSETEG00000010336	SMG5	56	44.681	ENSMODG00000004532	-	62	42.718	Monodelphis_domestica
ENSETEG00000010336	SMG5	69	42.157	ENSMODG00000004735	-	71	42.157	Monodelphis_domestica
ENSETEG00000010336	SMG5	82	84.466	ENSMALG00000010375	smg5	75	84.466	Monopterus_albus
ENSETEG00000010336	SMG5	91	93.204	MGP_CAROLIEiJ_G0025163	Smg5	100	98.883	Mus_caroli
ENSETEG00000010336	SMG5	91	93.204	ENSMUSG00000001415	Smg5	99	98.883	Mus_musculus
ENSETEG00000010336	SMG5	91	93.204	MGP_PahariEiJ_G0026606	Smg5	100	98.883	Mus_pahari
ENSETEG00000010336	SMG5	91	93.204	MGP_SPRETEiJ_G0026104	Smg5	100	98.883	Mus_spretus
ENSETEG00000010336	SMG5	84	96.117	ENSMPUG00000004546	SMG5	81	96.117	Mustela_putorius_furo
ENSETEG00000010336	SMG5	89	95.146	ENSMLUG00000008518	SMG5	82	95.146	Myotis_lucifugus
ENSETEG00000010336	SMG5	79	53.704	ENSNGAG00000012101	-	71	53.704	Nannospalax_galili
ENSETEG00000010336	SMG5	91	93.204	ENSNGAG00000020706	Smg5	82	93.204	Nannospalax_galili
ENSETEG00000010336	SMG5	78	85.437	ENSNBRG00000004332	smg5	74	85.437	Neolamprologus_brichardi
ENSETEG00000010336	SMG5	83	97.087	ENSNLEG00000012439	SMG5	82	97.087	Nomascus_leucogenys
ENSETEG00000010336	SMG5	91	81.553	ENSMEUG00000012834	SMG5	82	81.553	Notamacropus_eugenii
ENSETEG00000010336	SMG5	89	93.204	ENSOPRG00000009152	SMG5	82	93.204	Ochotona_princeps
ENSETEG00000010336	SMG5	89	97.087	ENSODEG00000012237	SMG5	82	97.087	Octodon_degus
ENSETEG00000010336	SMG5	82	85.437	ENSONIG00000008632	smg5	75	85.437	Oreochromis_niloticus
ENSETEG00000010336	SMG5	86	92.233	ENSOCUG00000012886	SMG5	82	92.233	Oryctolagus_cuniculus
ENSETEG00000010336	SMG5	75	51.087	ENSOCUG00000023338	-	75	51.087	Oryctolagus_cuniculus
ENSETEG00000010336	SMG5	81	84.466	ENSORLG00000016239	smg5	74	84.466	Oryzias_latipes
ENSETEG00000010336	SMG5	84	84.466	ENSORLG00020013127	smg5	76	84.466	Oryzias_latipes_hni
ENSETEG00000010336	SMG5	81	84.466	ENSORLG00015019014	smg5	74	84.466	Oryzias_latipes_hsok
ENSETEG00000010336	SMG5	70	60.741	ENSOMEG00000021330	smg5	85	58.632	Oryzias_melastigma
ENSETEG00000010336	SMG5	91	97.087	ENSOGAG00000004966	SMG5	82	97.087	Otolemur_garnettii
ENSETEG00000010336	SMG5	89	97.087	ENSOARG00000005778	SMG5	82	97.087	Ovis_aries
ENSETEG00000010336	SMG5	81	54.902	ENSOARG00000011963	-	73	54.902	Ovis_aries
ENSETEG00000010336	SMG5	83	97.087	ENSPPAG00000011996	SMG5	82	97.087	Pan_paniscus
ENSETEG00000010336	SMG5	87	97.087	ENSPPRG00000011901	SMG5	82	97.087	Panthera_pardus
ENSETEG00000010336	SMG5	82	97.087	ENSPTIG00000007892	SMG5	79	97.087	Panthera_tigris_altaica
ENSETEG00000010336	SMG5	88	97.087	ENSPTRG00000049282	-	82	97.087	Pan_troglodytes
ENSETEG00000010336	SMG5	83	97.087	ENSPTRG00000023925	SMG5	82	97.087	Pan_troglodytes
ENSETEG00000010336	SMG5	89	97.087	ENSPANG00000011201	SMG5	82	97.087	Papio_anubis
ENSETEG00000010336	SMG5	82	80.583	ENSPKIG00000009402	smg5	75	80.583	Paramormyrops_kingsleyae
ENSETEG00000010336	SMG5	88	91.262	ENSPSIG00000015198	SMG5	82	90.385	Pelodiscus_sinensis
ENSETEG00000010336	SMG5	76	82.524	ENSPMGG00000010465	smg5	70	82.524	Periophthalmus_magnuspinnatus
ENSETEG00000010336	SMG5	89	93.204	ENSPEMG00000001819	Smg5	82	93.204	Peromyscus_maniculatus_bairdii
ENSETEG00000010336	SMG5	62	45.855	ENSPEMG00000010022	-	95	45.855	Peromyscus_maniculatus_bairdii
ENSETEG00000010336	SMG5	82	64.078	ENSPMAG00000000410	smg5	68	64.078	Petromyzon_marinus
ENSETEG00000010336	SMG5	91	95.146	ENSPCIG00000018938	SMG5	82	95.146	Phascolarctos_cinereus
ENSETEG00000010336	SMG5	63	84.466	ENSPFOG00000010191	smg5	76	84.466	Poecilia_formosa
ENSETEG00000010336	SMG5	63	84.466	ENSPLAG00000009332	smg5	76	84.466	Poecilia_latipinna
ENSETEG00000010336	SMG5	83	84.466	ENSPMEG00000014105	smg5	76	84.466	Poecilia_mexicana
ENSETEG00000010336	SMG5	63	84.466	ENSPREG00000017713	smg5	76	84.466	Poecilia_reticulata
ENSETEG00000010336	SMG5	89	97.087	ENSPPYG00000000723	SMG5	82	97.087	Pongo_abelii
ENSETEG00000010336	SMG5	75	95.146	ENSPCAG00000008412	SMG5	73	95.146	Procavia_capensis
ENSETEG00000010336	SMG5	89	97.087	ENSPCOG00000004741	SMG5	82	97.087	Propithecus_coquereli
ENSETEG00000010336	SMG5	91	96.117	ENSPVAG00000016748	SMG5	82	96.117	Pteropus_vampyrus
ENSETEG00000010336	SMG5	82	85.437	ENSPNYG00000013397	smg5	78	85.437	Pundamilia_nyererei
ENSETEG00000010336	SMG5	82	83.495	ENSPNAG00000028363	smg5	74	83.495	Pygocentrus_nattereri
ENSETEG00000010336	SMG5	91	94.175	ENSRNOG00000019590	Smg5	82	94.175	Rattus_norvegicus
ENSETEG00000010336	SMG5	83	97.087	ENSRBIG00000027428	SMG5	82	97.087	Rhinopithecus_bieti
ENSETEG00000010336	SMG5	83	96.117	ENSRROG00000030035	SMG5	82	96.117	Rhinopithecus_roxellana
ENSETEG00000010336	SMG5	83	96.117	ENSSBOG00000033339	SMG5	82	96.117	Saimiri_boliviensis_boliviensis
ENSETEG00000010336	SMG5	53	37.500	ENSSHAG00000000935	-	68	37.267	Sarcophilus_harrisii
ENSETEG00000010336	SMG5	64	49.438	ENSSHAG00000000561	-	67	49.438	Sarcophilus_harrisii
ENSETEG00000010336	SMG5	88	90.654	ENSSHAG00000014163	SMG5	82	90.654	Sarcophilus_harrisii
ENSETEG00000010336	SMG5	82	83.495	ENSSFOG00015024175	smg5	75	83.495	Scleropages_formosus
ENSETEG00000010336	SMG5	81	85.437	ENSSMAG00000013059	smg5	75	85.437	Scophthalmus_maximus
ENSETEG00000010336	SMG5	81	85.437	ENSSDUG00000007122	smg5	75	85.437	Seriola_dumerili
ENSETEG00000010336	SMG5	81	85.437	ENSSLDG00000011418	smg5	75	85.437	Seriola_lalandi_dorsalis
ENSETEG00000010336	SMG5	82	95.146	ENSSARG00000012484	SMG5	82	95.146	Sorex_araneus
ENSETEG00000010336	SMG5	77	88.350	ENSSPUG00000002260	SMG5	77	88.350	Sphenodon_punctatus
ENSETEG00000010336	SMG5	80	85.437	ENSSPAG00000014266	smg5	75	85.437	Stegastes_partitus
ENSETEG00000010336	SMG5	82	85.000	ENSSSCG00000039308	-	76	84.906	Sus_scrofa
ENSETEG00000010336	SMG5	83	97.087	ENSSSCG00000006490	-	87	97.087	Sus_scrofa
ENSETEG00000010336	SMG5	53	37.882	ENSSSCG00000037182	-	85	37.002	Sus_scrofa
ENSETEG00000010336	SMG5	90	89.320	ENSTGUG00000003748	-	82	89.320	Taeniopygia_guttata
ENSETEG00000010336	SMG5	84	84.466	ENSTRUG00000012580	smg5	76	84.466	Takifugu_rubripes
ENSETEG00000010336	SMG5	81	84.466	ENSTNIG00000010303	smg5	74	84.466	Tetraodon_nigroviridis
ENSETEG00000010336	SMG5	83	90.244	ENSTTRG00000001401	SMG5	82	80.575	Tursiops_truncatus
ENSETEG00000010336	SMG5	91	97.087	ENSUAMG00000013721	SMG5	82	97.087	Ursus_americanus
ENSETEG00000010336	SMG5	90	97.087	ENSUMAG00000018041	SMG5	83	97.087	Ursus_maritimus
ENSETEG00000010336	SMG5	87	93.204	ENSVPAG00000009446	SMG5	82	93.204	Vicugna_pacos
ENSETEG00000010336	SMG5	89	97.087	ENSVVUG00000005887	SMG5	82	97.087	Vulpes_vulpes
ENSETEG00000010336	SMG5	64	91.579	ENSXETG00000033791	SMG5	75	91.579	Xenopus_tropicalis
ENSETEG00000010336	SMG5	55	83.133	ENSXCOG00000004379	smg5	85	83.133	Xiphophorus_couchianus
ENSETEG00000010336	SMG5	83	84.466	ENSXMAG00000013499	smg5	76	84.466	Xiphophorus_maculatus